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Data Pipeline

Bruker TimsTof data

Data Pipeline

 
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Queue Position
COMPLETE2024-06-05 10:14:11Validating data for experiment Id: 1844, validation Id: 970  
COMPLETE2024-06-04 21:55:49Copying experiment: Linear Ion Trap Global to Targeted Proteomics: A workflow for targeted proteomics assay development using a versatile linear ion trap  
COMPLETE2024-06-04 11:20:28Skyline document import - Exp_CSF_GPF_A_2024-05-06_21-16-47.sky.zip  
COMPLETE2024-06-04 11:01:49Skyline document import - 2024-05 CSF LIT GPF-MSFragger-3.sky.zip  
COMPLETE2024-06-04 10:24:44Skyline document import - 240207_gpf_2024-06-04_10-24-18.sky.zip  
COMPLETE2024-06-04 07:35:12Skyline document import - 230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip  
COMPLETE2024-06-04 07:02:24Skyline document import - 230124_p2_neo_30min_3500targets_opt_trans_pepleveldilution_2024-06-04_06-58-16.sky.zip  
COMPLETE2024-06-03 15:31:13Skyline document import - CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip  
COMPLETE2024-06-03 15:00:31Skyline document import - Exp_CSF_MMCC_quant_all_adjBound_opttrans_nochick_2024-06-03_14-53-02.sky.zip  
COMPLETE2024-06-03 14:39:07Skyline document import - OT_GPF_PRM_survey_MMCC_boundaries_opttrans_nochick_2024-06-03_14-36-08.sky.zip  
COMPLETE2024-06-03 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-06-03 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-06-03 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-06-03 10:00:01.629 
COMPLETE2024-06-03 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-06-03 10:00:01.494 
COMPLETE2024-06-03 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-06-03 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-06-02 15:41:59Skyline document import - LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick_2024-06-02_15-26-11.sky.zip  
COMPLETE2024-05-30 19:20:14Validating data for experiment Id: 1842, validation Id: 961  
COMPLETE2024-05-30 19:02:34Copying experiment: Characterization of Stellar MS  
COMPLETE2024-05-30 18:14:55Copying experiment: Tutorials on How to Use PRM Conductor, a Skyline External Tool  
COMPLETE2024-05-27 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-05-27 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-05-27 10:00:01.310 
COMPLETE2024-05-27 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-05-27 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-05-27 10:00:01.189 
COMPLETE2024-05-27 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-05-27 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-05-21 22:59:56Validating data for experiment Id: 1826, validation Id: 899  
COMPLETE2024-05-21 22:55:35Copying experiment: Coho ovarian tissue response to gonadotropins  
COMPLETE2024-05-20 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-05-20 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-05-20 10:00:01.713 
COMPLETE2024-05-20 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-05-20 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-05-20 10:00:01.633 
COMPLETE2024-05-20 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-05-20 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-05-15 22:46:08Skyline document import - figure2_PRM_system_suitability_2024-05-16_12-43-59.sky.zip  
COMPLETE2024-05-15 12:47:56Copying experiment: GlyCombo enables rapid, complete glycan composition identification across diverse glycomic sample types  
COMPLETE2024-05-13 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-05-13 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-05-13 10:00:01.386 
COMPLETE2024-05-13 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-05-13 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-05-13 10:00:01.311 
COMPLETE2024-05-13 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-05-13 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-05-08 08:09:24Skyline document import - IO3_library_tissue_v01D.sky.zip  
COMPLETE2024-05-06 10:00:07etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-05-06 10:00:05etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-05-06 10:00:05File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-05-06 10:00:07.083 
COMPLETE2024-05-06 10:00:04File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-05-06 10:00:06.180 
COMPLETE2024-05-06 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-05-06 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-05-02 09:45:36Validating data for experiment Id: 1769, validation Id: 877  
COMPLETE2024-05-01 05:14:17Skyline document import - 20240429_OG_Dataset6.sky.zip  
COMPLETE2024-05-01 05:13:11Skyline document import - 20240429_OG_Dataset6_filtered.sky.zip  
COMPLETE2024-05-01 05:10:06Skyline document import - 20240429_U87MGNG_Dataset4_filtered.sky.zip  
COMPLETE2024-05-01 05:09:14Skyline document import - 20240429_U87MGNG_Dataset4_filtered_2024-05-01_22-08-51.sky.zip  
COMPLETE2024-05-01 05:03:28Skyline document import - 20240429_U87MGNG_Dataset4.sky.zip  
COMPLETE2024-05-01 05:00:28Skyline document import - 20240429_PermFet_Dataset3_filtered.sky.zip  
COMPLETE2024-05-01 03:45:11Skyline document import - 20240429_Fetuin_Dataset1.sky.zip  
COMPLETE2024-05-01 03:43:32Skyline document import - 20240429_GSL_Dataset5_2024-05-01.sky.zip  
COMPLETE2024-05-01 03:42:36Skyline document import - 20240429_GSL_Dataset5_filtered.sky.zip  
COMPLETE2024-04-30 20:58:25Copying experiment: Defective pgsA contributes to increased membrane fluidity and cell wall thickening in S. aureus with high-level daptomycin resistance  
COMPLETE2024-04-30 19:10:03Skyline document import - 20240429_CSFNG_Dataset2_2024-05-01.sky.zip  
COMPLETE2024-04-30 19:02:18Skyline document import - 20240429_CSFNG_Dataset2_filtered.sky.zip  
COMPLETE2024-04-30 09:53:07Skyline document import - 20240429_PermFet_Dataset3.sky.zip  
COMPLETE2024-04-30 09:43:25Skyline document import - 20240429_Fetuin_Dataset1_filtered_2024-05-01_02-40-20.sky.zip  
COMPLETE2024-04-30 09:35:55Skyline document import - 20240429_Fetuin_Dataset1_filtered.sky.zip  
COMPLETE2024-04-29 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-04-29 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-04-29 10:00:01.455 
COMPLETE2024-04-29 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-04-29 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-04-29 10:00:01.354 
COMPLETE2024-04-29 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-04-29 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-04-22 10:00:03etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-04-22 10:00:03File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-04-22 10:00:03.533 
COMPLETE2024-04-22 10:00:03etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
ERROR2024-04-22 10:00:02File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Error copying log file to /data/labkey/files/Panorama Public/@files/etlOut: java.nio.file.AccessDeniedException: /data/labkey/files/Panorama Public/@files/etlOut/PopulateGrowthFirstSubmissionDate/fileWatcherMoveJob_2024-04-22_10-00-03.log 
COMPLETE2024-04-22 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-04-22 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-04-15 10:00:04etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-04-15 10:00:04File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-04-15 10:00:04.079 
COMPLETE2024-04-15 10:00:03etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
ERROR2024-04-15 10:00:02File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Error copying log file to /data/labkey/files/Panorama Public/@files/etlOut: java.nio.file.AccessDeniedException: /data/labkey/files/Panorama Public/@files/etlOut/PopulateGrowthFirstSubmissionDate/fileWatcherMoveJob_2024-04-15_10-00-03.log 
COMPLETE2024-04-15 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-04-15 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-04-10 20:10:44Validating data for experiment Id: 1796, validation Id: 860  
COMPLETE2024-04-09 15:18:41Validating data for experiment Id: 1796, validation Id: 859  
COMPLETE2024-04-09 15:11:07Copying experiment: A framework for quality control in quantitative proteomics  
COMPLETE2024-04-08 10:00:02etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-04-08 10:00:02File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-04-08 10:00:02.633 
COMPLETE2024-04-08 10:00:01etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-04-08 10:00:01File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-04-08 10:00:01.852 
COMPLETE2024-04-08 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-04-08 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-04-01 10:00:02etlOut/GrowthFirstSubmissionDate (PopulateGrowthFirstSubmissionDate) (GrowthFirstSubmissionDate.tsv)  
COMPLETE2024-04-01 10:00:02File watcher: Copy/Move files job (GrowthFirstSubmissionDate.tsv)Job finished at: 2024-04-01 10:00:02.702 
COMPLETE2024-04-01 10:00:01etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-04-01 10:00:01File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-04-01 10:00:01.985 
COMPLETE2024-04-01 10:00:00ETL Job: Copy DatasetsFirstSubmissionDate query to a list  
COMPLETE2024-04-01 10:00:00ETL Job: Copy Datasets query to a list  
COMPLETE2024-03-25 10:00:03etlOut/Growth (PopulateGrowth) (Growth.tsv)  
COMPLETE2024-03-25 10:00:03File watcher: Copy/Move files job (Growth.tsv)Job finished at: 2024-03-25 10:00:03.738