Skyline document import - CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip

Stellar highly multiplex fluid assays

Job Status

Created: 2024-06-03 15:31:13
Modified: 2024-06-03 15:33:03
Email: plubell@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip
File Path: /data/labkey/files/MacCoss/Deanna/Stellar highly multiplex fluid assays/@files/SkylineFiles/CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky_2024-06-03_15-31-13.log
Files: CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky_2024-06-03_15-31-13.log
Completed Runs: CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip

Log File


03 Jun 2024 15:31:13,543 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
03 Jun 2024 15:31:13,544 INFO : Starting to import Skyline document from CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip
03 Jun 2024 15:31:13,544 INFO : Expanding uniprot_human_sept2022__ADpeptides_yeastENO1.protdb
03 Jun 2024 15:31:15,988 INFO : Expanding CSF_neurod105_assay_individuals_manual.blib
03 Jun 2024 15:31:16,467 INFO : Expanding CSF_neurod105_assay_individuals_manual.skyd
03 Jun 2024 15:31:18,576 INFO : Expanding CSF_neurod105_assay_individuals_manual.sky.view
03 Jun 2024 15:31:18,577 INFO : Expanding CSF_neurod105_assay_individuals_manual.sky
03 Jun 2024 15:31:18,814 INFO : Expanding CSF_neurod105_assay_individuals_manual.skyl
03 Jun 2024 15:31:18,855 WARN : The version of this Skyline document is 23.12. This is newer than the highest supported version 23.1
03 Jun 2024 15:31:23,002 INFO : Inserting sp|P02766|TTHY_HUMAN
03 Jun 2024 15:31:23,021 WARN : 'AD_105_individuals_manual' library was not found in settings.
03 Jun 2024 15:31:23,126 INFO : 1% Done
03 Jun 2024 15:31:23,312 INFO : Inserting sp|Q96PD5|PGRP2_HUMAN
03 Jun 2024 15:31:23,509 INFO : 2% Done
03 Jun 2024 15:31:23,785 INFO : Inserting sp|Q13822|ENPP2_HUMAN
03 Jun 2024 15:31:23,881 INFO : 3% Done
03 Jun 2024 15:31:24,235 INFO : 4% Done
03 Jun 2024 15:31:24,442 INFO : Inserting sp|P06733|ENOA_HUMAN
03 Jun 2024 15:31:24,562 INFO : 5% Done
03 Jun 2024 15:31:24,704 INFO : Inserting sp|P14618|KPYM_HUMAN
03 Jun 2024 15:31:24,914 INFO : 6% Done
03 Jun 2024 15:31:25,038 INFO : Inserting sp|O95502|NPTXR_HUMAN
03 Jun 2024 15:31:25,177 INFO : Inserting sp|Q15818|NPTX1_HUMAN
03 Jun 2024 15:31:25,244 INFO : 7% Done
03 Jun 2024 15:31:25,594 INFO : 8% Done
03 Jun 2024 15:31:25,628 INFO : Inserting sp|P01009|A1AT_HUMAN
03 Jun 2024 15:31:25,993 INFO : 9% Done
03 Jun 2024 15:31:26,158 INFO : Inserting sp|P01024|CO3_HUMAN
03 Jun 2024 15:31:26,347 INFO : 10% Done
03 Jun 2024 15:31:26,692 INFO : 11% Done
03 Jun 2024 15:31:27,069 INFO : Inserting sp|P08253|MMP2_HUMAN
03 Jun 2024 15:31:27,075 INFO : 12% Done
03 Jun 2024 15:31:27,385 INFO : Inserting sp|Q9H4F8|SMOC1_HUMAN
03 Jun 2024 15:31:27,446 INFO : 13% Done
03 Jun 2024 15:31:27,506 INFO : Inserting sp|P04075|ALDOA_HUMAN
03 Jun 2024 15:31:27,778 INFO : 14% Done
03 Jun 2024 15:31:27,880 INFO : Inserting sp|Q92520|FAM3C_HUMAN
03 Jun 2024 15:31:28,162 INFO : 15% Done
03 Jun 2024 15:31:28,259 INFO : Inserting sp|P36222|CH3L1_HUMAN
03 Jun 2024 15:31:28,505 INFO : 16% Done
03 Jun 2024 15:31:28,730 INFO : Inserting sp|P41222|PTGDS_HUMAN
03 Jun 2024 15:31:28,857 INFO : 17% Done
03 Jun 2024 15:31:29,049 INFO : Inserting sp|P63104|1433Z_HUMAN
03 Jun 2024 15:31:29,052 INFO : Inserting sp|P69905|HBA_HUMAN
03 Jun 2024 15:31:29,231 INFO : 18% Done
03 Jun 2024 15:31:29,330 INFO : Inserting sp|P27169|PON1_HUMAN
03 Jun 2024 15:31:29,545 INFO : Inserting sp|O76070|SYUG_HUMAN
03 Jun 2024 15:31:29,585 INFO : Inserting sp|P00747|PLMN_HUMAN
03 Jun 2024 15:31:29,592 INFO : 19% Done
03 Jun 2024 15:31:29,919 INFO : 20% Done
03 Jun 2024 15:31:30,073 INFO : Inserting sp|P00441|SODC_HUMAN
03 Jun 2024 15:31:30,136 INFO : Inserting sp|P06396|GELS_HUMAN
03 Jun 2024 15:31:30,319 INFO : 21% Done
03 Jun 2024 15:31:30,690 INFO : 22% Done
03 Jun 2024 15:31:31,038 INFO : Inserting sp|P10636|TAU_HUMAN
03 Jun 2024 15:31:31,073 INFO : Inserting sp|P32119|PRDX2_HUMAN / sp|Q06830|PRDX1_HUMAN
03 Jun 2024 15:31:31,083 INFO : 23% Done
03 Jun 2024 15:31:31,124 INFO : Inserting sp|P00492|HPRT_HUMAN
03 Jun 2024 15:31:31,230 INFO : Inserting sp|P22105|TENX_HUMAN
03 Jun 2024 15:31:31,439 INFO : 24% Done
03 Jun 2024 15:31:31,466 INFO : Inserting sp|P29622|KAIN_HUMAN
03 Jun 2024 15:31:31,800 INFO : 25% Done
03 Jun 2024 15:31:31,907 INFO : Inserting sp|P09936|UCHL1_HUMAN
03 Jun 2024 15:31:31,935 INFO : Inserting sp|P16070|CD44_HUMAN
03 Jun 2024 15:31:32,075 INFO : Inserting sp|Q15782|CH3L2_HUMAN
03 Jun 2024 15:31:32,236 INFO : Inserting sp|P07585|PGS2_HUMAN
03 Jun 2024 15:31:32,365 INFO : Inserting sp|P09104|ENOG_HUMAN
03 Jun 2024 15:31:32,539 INFO : 26% Done
03 Jun 2024 15:31:32,639 INFO : Inserting sp|P04264|K2C1_HUMAN
03 Jun 2024 15:31:32,890 INFO : 27% Done
03 Jun 2024 15:31:32,935 INFO : Inserting sp|P12259|FA5_HUMAN
03 Jun 2024 15:31:33,211 INFO : 28% Done
03 Jun 2024 15:31:33,576 INFO : Inserting sp|P02746|C1QB_HUMAN
03 Jun 2024 15:31:33,582 INFO : 29% Done
03 Jun 2024 15:31:33,816 INFO : Inserting sp|P07195|LDHB_HUMAN
03 Jun 2024 15:31:33,920 INFO : 30% Done
03 Jun 2024 15:31:33,950 INFO : Inserting sp|P17174|AATC_HUMAN
03 Jun 2024 15:31:34,258 INFO : 31% Done
03 Jun 2024 15:31:34,433 INFO : Inserting sp|P68871|HBB_HUMAN
03 Jun 2024 15:31:34,602 INFO : Inserting sp|P05067|A4_HUMAN
03 Jun 2024 15:31:34,619 INFO : 32% Done
03 Jun 2024 15:31:34,987 INFO : 33% Done
03 Jun 2024 15:31:35,320 INFO : 34% Done
03 Jun 2024 15:31:35,420 INFO : Inserting sp|Q08380|LG3BP_HUMAN
03 Jun 2024 15:31:35,701 INFO : 35% Done
03 Jun 2024 15:31:36,053 INFO : Inserting sp|P13521|SCG2_HUMAN
03 Jun 2024 15:31:36,062 INFO : 36% Done
03 Jun 2024 15:31:36,345 INFO : Inserting sp|P16949|STMN1_HUMAN / sp|Q93045|STMN2_HUMAN
03 Jun 2024 15:31:36,381 INFO : Inserting sp|Q9Y4C0|NRX3A_HUMAN
03 Jun 2024 15:31:36,389 INFO : 37% Done
03 Jun 2024 15:31:36,772 INFO : 38% Done
03 Jun 2024 15:31:36,981 INFO : Inserting sp|P61626|LYSC_HUMAN
03 Jun 2024 15:31:37,092 INFO : Inserting sp|O15240|VGF_HUMAN
03 Jun 2024 15:31:37,127 INFO : 39% Done
03 Jun 2024 15:31:37,464 INFO : Inserting sp|P00739|HPTR_HUMAN
03 Jun 2024 15:31:37,517 INFO : 40% Done
03 Jun 2024 15:31:37,852 INFO : 41% Done
03 Jun 2024 15:31:37,945 INFO : Inserting sp|P05413|FABPH_HUMAN
03 Jun 2024 15:31:37,997 INFO : Inserting sp|P02788|TRFL_HUMAN
03 Jun 2024 15:31:38,060 INFO : Inserting sp|Q8IV08|PLD3_HUMAN
03 Jun 2024 15:31:38,241 INFO : 42% Done
03 Jun 2024 15:31:38,271 INFO : Inserting sp|P31150|GDIA_HUMAN
03 Jun 2024 15:31:38,435 INFO : Inserting sp|P10451|OSTP_HUMAN
03 Jun 2024 15:31:38,573 INFO : 43% Done
03 Jun 2024 15:31:38,626 INFO : Inserting sp|P02786|TFR1_HUMAN
03 Jun 2024 15:31:38,654 INFO : Inserting sp|P08294|SODE_HUMAN
03 Jun 2024 15:31:38,952 INFO : Inserting sp|Q99574|NEUS_HUMAN
03 Jun 2024 15:31:38,961 INFO : 44% Done
03 Jun 2024 15:31:39,317 INFO : Inserting sp|P55290|CAD13_HUMAN
03 Jun 2024 15:31:39,354 INFO : 45% Done
03 Jun 2024 15:31:39,673 INFO : Inserting sp|P10643|CO7_HUMAN
03 Jun 2024 15:31:39,705 INFO : 46% Done
03 Jun 2024 15:31:40,094 INFO : 47% Done
03 Jun 2024 15:31:40,408 INFO : Inserting sp|P16519|NEC2_HUMAN
03 Jun 2024 15:31:40,450 INFO : Inserting sp|Q99435|NELL2_HUMAN
03 Jun 2024 15:31:40,461 INFO : 48% Done
03 Jun 2024 15:31:40,852 INFO : 49% Done
03 Jun 2024 15:31:41,231 INFO : 50% Done
03 Jun 2024 15:31:41,527 INFO : Inserting sp|Q9Y6R7|FCGBP_HUMAN
03 Jun 2024 15:31:41,535 INFO : 51% Done
03 Jun 2024 15:31:41,906 INFO : 52% Done
03 Jun 2024 15:31:42,283 INFO : 53% Done
03 Jun 2024 15:31:42,654 INFO : 54% Done
03 Jun 2024 15:31:42,792 INFO : Inserting sp|P07737|PROF1_HUMAN
03 Jun 2024 15:31:42,946 INFO : Inserting sp|Q7Z3B1|NEGR1_HUMAN
03 Jun 2024 15:31:43,016 INFO : 55% Done
03 Jun 2024 15:31:43,290 INFO : Inserting sp|P02768|ALBU_HUMAN
03 Jun 2024 15:31:43,468 INFO : 56% Done
03 Jun 2024 15:31:43,890 INFO : 57% Done
03 Jun 2024 15:31:44,296 INFO : 58% Done
03 Jun 2024 15:31:44,723 INFO : 59% Done
03 Jun 2024 15:31:44,854 INFO : Inserting sp|Q9P2S2|NRX2A_HUMAN
03 Jun 2024 15:31:45,038 INFO : 60% Done
03 Jun 2024 15:31:45,227 INFO : Inserting sp|P31946|1433B_HUMAN
03 Jun 2024 15:31:45,266 INFO : Inserting sp|P22303|ACES_HUMAN
03 Jun 2024 15:31:45,376 INFO : Inserting sp|P10909|CLUS_HUMAN
03 Jun 2024 15:31:45,425 INFO : 61% Done
03 Jun 2024 15:31:45,785 INFO : 62% Done
03 Jun 2024 15:31:45,852 INFO : Inserting sp|P10645|CMGA_HUMAN
03 Jun 2024 15:31:46,150 INFO : 63% Done
03 Jun 2024 15:31:46,276 INFO : Inserting sp|P13591|NCAM1_HUMAN
03 Jun 2024 15:31:46,466 INFO : 64% Done
03 Jun 2024 15:31:46,821 INFO : 65% Done
03 Jun 2024 15:31:46,889 INFO : Inserting sp|P23142|FBLN1_HUMAN
03 Jun 2024 15:31:47,182 INFO : 66% Done
03 Jun 2024 15:31:47,533 INFO : Inserting sp|Q06481|APLP2_HUMAN
03 Jun 2024 15:31:47,543 INFO : 67% Done
03 Jun 2024 15:31:47,928 INFO : 68% Done
03 Jun 2024 15:31:48,022 INFO : Inserting sp|Q24JP5|T132A_HUMAN
03 Jun 2024 15:31:48,262 INFO : 69% Done
03 Jun 2024 15:31:48,356 INFO : Inserting sp|P39060|COIA1_HUMAN
03 Jun 2024 15:31:48,618 INFO : 70% Done
03 Jun 2024 15:31:48,648 INFO : Inserting sp|P04406|G3P_HUMAN
03 Jun 2024 15:31:48,833 INFO : Inserting sp|Q96GD0|PLPP_HUMAN
03 Jun 2024 15:31:48,862 INFO : Inserting sp|P00505|AATM_HUMAN
03 Jun 2024 15:31:48,926 INFO : 71% Done
03 Jun 2024 15:31:48,966 INFO : Inserting sp|Q8WXD2|SCG3_HUMAN
03 Jun 2024 15:31:49,305 INFO : 72% Done
03 Jun 2024 15:31:49,337 INFO : Inserting sp|P01042|KNG1_HUMAN
03 Jun 2024 15:31:49,662 INFO : 73% Done
03 Jun 2024 15:31:49,817 INFO : Inserting sp|Q9ULZ9|MMP17_HUMAN
03 Jun 2024 15:31:49,841 INFO : Inserting sp|P62937|PPIA_HUMAN
03 Jun 2024 15:31:49,974 INFO : Inserting sp|P61981|1433G_HUMAN
03 Jun 2024 15:31:49,976 INFO : Inserting sp|P78509|RELN_HUMAN
03 Jun 2024 15:31:49,998 INFO : 74% Done
03 Jun 2024 15:31:50,723 INFO : 75% Done
03 Jun 2024 15:31:51,061 INFO : 76% Done
03 Jun 2024 15:31:51,081 INFO : Inserting sp|P54289|CA2D1_HUMAN
03 Jun 2024 15:31:51,383 INFO : 77% Done
03 Jun 2024 15:31:51,755 INFO : 78% Done
03 Jun 2024 15:31:51,778 INFO : Inserting sp|P05060|SCG1_HUMAN
03 Jun 2024 15:31:52,134 INFO : 79% Done
03 Jun 2024 15:31:52,266 INFO : Inserting sp|Q9ULB1|NRX1A_HUMAN
03 Jun 2024 15:31:52,454 INFO : 80% Done
03 Jun 2024 15:31:52,803 INFO : 81% Done
03 Jun 2024 15:31:52,921 INFO : Inserting sp|O94760|DDAH1_HUMAN
03 Jun 2024 15:31:52,948 INFO : Inserting sp|P00338|LDHA_HUMAN
03 Jun 2024 15:31:53,028 INFO : Inserting sp|P00915|CAH1_HUMAN
03 Jun 2024 15:31:53,150 INFO : 82% Done
03 Jun 2024 15:31:53,174 INFO : Inserting sp|P12111|CO6A3_HUMAN
03 Jun 2024 15:31:53,501 INFO : 83% Done
03 Jun 2024 15:31:53,836 INFO : 84% Done
03 Jun 2024 15:31:53,976 INFO : Inserting sp|Q92932|PTPR2_HUMAN
03 Jun 2024 15:31:54,166 INFO : 85% Done
03 Jun 2024 15:31:54,241 INFO : Inserting sp|Q92823|NRCAM_HUMAN
03 Jun 2024 15:31:54,555 INFO : 86% Done
03 Jun 2024 15:31:54,925 INFO : 87% Done
03 Jun 2024 15:31:55,143 INFO : Inserting sp|Q01459|DIAC_HUMAN
03 Jun 2024 15:31:55,265 INFO : Inserting sp|Q96KN2|CNDP1_HUMAN
03 Jun 2024 15:31:55,284 INFO : 88% Done
03 Jun 2024 15:31:55,705 INFO : 89% Done
03 Jun 2024 15:31:56,022 INFO : Inserting sp|P02649|APOE_HUMAN
03 Jun 2024 15:31:56,068 INFO : 90% Done
03 Jun 2024 15:31:56,474 INFO : 91% Done
03 Jun 2024 15:31:56,760 INFO : Inserting sp|P12109|CO6A1_HUMAN
03 Jun 2024 15:31:56,824 INFO : 92% Done
03 Jun 2024 15:31:57,264 INFO : 93% Done
03 Jun 2024 15:31:57,555 INFO : Inserting sp|P49641|MA2A2_HUMAN
03 Jun 2024 15:31:57,616 INFO : 94% Done
03 Jun 2024 15:31:57,915 INFO : Inserting sp|Q99497|PARK7_HUMAN
03 Jun 2024 15:31:57,940 INFO : Inserting sp|P00558|PGK1_HUMAN
03 Jun 2024 15:31:58,002 INFO : 95% Done
03 Jun 2024 15:31:58,102 INFO : Inserting sp|P05156|CFAI_HUMAN
03 Jun 2024 15:31:58,337 INFO : 96% Done
03 Jun 2024 15:31:58,696 INFO : 97% Done
03 Jun 2024 15:31:58,747 INFO : Inserting sp|P00924|ENO1_YEAST
03 Jun 2024 15:31:59,068 INFO : Inserting apoE_E2
03 Jun 2024 15:31:59,110 INFO : Imported 100 peptide groups.
03 Jun 2024 15:31:59,111 INFO : Inserting apoE_E4
03 Jun 2024 15:31:59,118 INFO : 98% Done
03 Jun 2024 15:31:59,151 INFO : Inserting sp|P32119|PRDX2_HUMAN
03 Jun 2024 15:31:59,333 INFO : Done parsing Skyline document.
03 Jun 2024 15:32:05,751 INFO : Creating and populating temp tables for Proportion values
03 Jun 2024 15:32:05,860 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
03 Jun 2024 15:32:07,190 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
03 Jun 2024 15:32:08,122 INFO : Cleaning up temp tables
03 Jun 2024 15:32:08,426 INFO : Completed import of Skyline document from CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip
03 Jun 2024 15:32:08,428 INFO : 100% Done
03 Jun 2024 15:32:08,452 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'