26 Nov 2024 11:33:00,406 DEBUG: Resetting Job ID: f65f0993-8e5a-103d-8801-8d1d6db26dce

26 Nov 2024 11:33:00,424 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

26 Nov 2024 11:33:00,425 INFO : Starting to import Skyline document from EVplasma_wide_crudetargetsonly_2024-11-26_11-32-53.sky.zip

26 Nov 2024 11:33:00,425 INFO : Expanding uniprot_human_sept2022_ADpeptides_yeastENO1.protdb

26 Nov 2024 11:33:02,661 INFO : Expanding EVplasma_12mzstaggered.elib

26 Nov 2024 11:33:02,873 INFO : Expanding EVplasma_wide_crudetargetsonly.skyd

26 Nov 2024 11:33:03,274 INFO : Expanding EVplasma_wide_crudetargetsonly.sky.view

26 Nov 2024 11:33:03,274 INFO : Expanding EVplasma_wide_crudetargetsonly.sky

26 Nov 2024 11:33:03,278 INFO : Expanding EVplasma_wide_crudetargetsonly.skyl

26 Nov 2024 11:33:03,279 INFO : Reading Skyline file, EVplasma_wide_crudetargetsonly.sky, to determine if the TransitionChromInfos in the document should be stored...

26 Nov 2024 11:33:03,284 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored

26 Nov 2024 11:33:03,284 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1

26 Nov 2024 11:33:03,286 INFO : 1% Done

26 Nov 2024 11:33:03,855 DEBUG: Starting to load chromatogram headers

26 Nov 2024 11:33:03,903 DEBUG: Done loading chromatogram headers

26 Nov 2024 11:33:05,096 INFO : Inserting sp|P59190|RAB15_HUMAN

26 Nov 2024 11:33:05,100 INFO : 2% Done

26 Nov 2024 11:33:05,106 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,107 INFO : 3% Done

26 Nov 2024 11:33:05,107 INFO : Inserting sp|Q92928|RAB1C_HUMAN

26 Nov 2024 11:33:05,116 INFO : 4% Done

26 Nov 2024 11:33:05,120 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,120 INFO : Inserting sp|P20338|RAB4A_HUMAN / sp|Q86YS6|RAB43_HUMAN / sp|Q6IQ22|RAB12_HUMAN / sp|P20337|RAB3B_HUMAN / sp|P61018|RAB4B_HUMAN

26 Nov 2024 11:33:05,129 INFO : 5% Done

26 Nov 2024 11:33:05,133 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,133 INFO : 6% Done

26 Nov 2024 11:33:05,133 INFO : Inserting sp|Q8NHP1|ARK74_HUMAN

26 Nov 2024 11:33:05,140 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,140 INFO : Inserting sp|P17081|RHOQ_HUMAN / sp|Q9H4E5|RHOJ_HUMAN

26 Nov 2024 11:33:05,145 INFO : 7% Done

26 Nov 2024 11:33:05,149 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,149 INFO : Inserting sp|Q96AX2|RAB37_HUMAN

26 Nov 2024 11:33:05,152 INFO : 8% Done

26 Nov 2024 11:33:05,156 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,156 INFO : Inserting sp|P37802|TAGL2_HUMAN

26 Nov 2024 11:33:05,164 INFO : 9% Done

26 Nov 2024 11:33:05,169 INFO : 10% Done

26 Nov 2024 11:33:05,179 INFO : 11% Done

26 Nov 2024 11:33:05,183 DEBUG: Total peptides inserted: 5

26 Nov 2024 11:33:05,184 INFO : 12% Done

26 Nov 2024 11:33:05,184 INFO : Inserting sp|P63104|1433Z_HUMAN

26 Nov 2024 11:33:05,187 INFO : 13% Done

26 Nov 2024 11:33:05,198 INFO : 14% Done

26 Nov 2024 11:33:05,204 INFO : 15% Done

26 Nov 2024 11:33:05,214 INFO : 16% Done

26 Nov 2024 11:33:05,219 INFO : 17% Done

26 Nov 2024 11:33:05,230 INFO : 18% Done

26 Nov 2024 11:33:05,234 DEBUG: Total peptides inserted: 9

26 Nov 2024 11:33:05,234 INFO : Inserting sp|P55072|TERA_HUMAN

26 Nov 2024 11:33:05,237 INFO : 19% Done

26 Nov 2024 11:33:05,246 INFO : 20% Done

26 Nov 2024 11:33:05,252 INFO : 21% Done

26 Nov 2024 11:33:05,257 INFO : 22% Done

26 Nov 2024 11:33:05,266 INFO : 23% Done

26 Nov 2024 11:33:05,272 INFO : 24% Done

26 Nov 2024 11:33:05,280 INFO : 25% Done

26 Nov 2024 11:33:05,295 INFO : 26% Done

26 Nov 2024 11:33:05,301 INFO : 27% Done

26 Nov 2024 11:33:05,307 INFO : 28% Done

26 Nov 2024 11:33:05,317 INFO : 29% Done

26 Nov 2024 11:33:05,323 INFO : 30% Done

26 Nov 2024 11:33:05,333 INFO : 31% Done

26 Nov 2024 11:33:05,336 DEBUG: Total peptides inserted: 20

26 Nov 2024 11:33:05,336 INFO : Inserting sp|P27797|CALR_HUMAN

26 Nov 2024 11:33:05,340 INFO : 32% Done

26 Nov 2024 11:33:05,350 INFO : 33% Done

26 Nov 2024 11:33:05,353 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,353 INFO : Inserting sp|Q9H0U4|RAB1B_HUMAN

26 Nov 2024 11:33:05,356 INFO : 34% Done

26 Nov 2024 11:33:05,365 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,366 INFO : 35% Done

26 Nov 2024 11:33:05,366 INFO : Inserting tr|A0A1B0GUL7|A0A1B0GUL7_HUMAN / sp|Q02750|MP2K1_HUMAN

26 Nov 2024 11:33:05,370 INFO : 36% Done

26 Nov 2024 11:33:05,374 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,374 INFO : Inserting sp|P15153|RAC2_HUMAN

26 Nov 2024 11:33:05,377 INFO : 37% Done

26 Nov 2024 11:33:05,388 INFO : 38% Done

26 Nov 2024 11:33:05,393 INFO : 39% Done

26 Nov 2024 11:33:05,401 INFO : 40% Done

26 Nov 2024 11:33:05,405 DEBUG: Total peptides inserted: 6

26 Nov 2024 11:33:05,405 INFO : Inserting sp|P31947|1433S_HUMAN

26 Nov 2024 11:33:05,408 INFO : 41% Done

26 Nov 2024 11:33:05,417 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,417 INFO : Inserting sp|P62820|RAB1A_HUMAN

26 Nov 2024 11:33:05,420 INFO : 42% Done

26 Nov 2024 11:33:05,426 INFO : 43% Done

26 Nov 2024 11:33:05,430 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,430 INFO : Inserting sp|P53618|COPB_HUMAN

26 Nov 2024 11:33:05,437 INFO : 44% Done

26 Nov 2024 11:33:05,442 INFO : 45% Done

26 Nov 2024 11:33:05,446 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,446 INFO : Inserting sp|P84095|RHOG_HUMAN

26 Nov 2024 11:33:05,449 INFO : 46% Done

26 Nov 2024 11:33:05,453 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,453 INFO : Inserting sp|P61106|RAB14_HUMAN

26 Nov 2024 11:33:05,457 INFO : 47% Done

26 Nov 2024 11:33:05,461 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,462 INFO : Inserting sp|Q15286|RAB35_HUMAN

26 Nov 2024 11:33:05,465 INFO : 48% Done

26 Nov 2024 11:33:05,469 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,469 INFO : Inserting sp|O95716|RAB3D_HUMAN

26 Nov 2024 11:33:05,475 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,476 INFO : Inserting sp|P60763|RAC3_HUMAN

26 Nov 2024 11:33:05,479 INFO : 49% Done

26 Nov 2024 11:33:05,484 INFO : 50% Done

26 Nov 2024 11:33:05,491 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,491 INFO : Inserting sp|P31946|1433B_HUMAN

26 Nov 2024 11:33:05,495 INFO : 51% Done

26 Nov 2024 11:33:05,499 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,499 INFO : Inserting sp|P51153|RAB13_HUMAN

26 Nov 2024 11:33:05,502 INFO : 52% Done

26 Nov 2024 11:33:05,506 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,507 INFO : 53% Done

26 Nov 2024 11:33:05,507 INFO : Inserting sp|O60518|RNBP6_HUMAN

26 Nov 2024 11:33:05,517 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,518 INFO : 54% Done

26 Nov 2024 11:33:05,518 INFO : Inserting sp|Q04917|1433F_HUMAN

26 Nov 2024 11:33:05,520 INFO : 55% Done

26 Nov 2024 11:33:05,529 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,529 INFO : Inserting sp|P04406|G3P_HUMAN

26 Nov 2024 11:33:05,532 INFO : 56% Done

26 Nov 2024 11:33:05,537 INFO : 57% Done

26 Nov 2024 11:33:05,548 INFO : 58% Done

26 Nov 2024 11:33:05,554 INFO : 59% Done

26 Nov 2024 11:33:05,558 DEBUG: Total peptides inserted: 5

26 Nov 2024 11:33:05,558 INFO : Inserting sp|Q15771|RAB30_HUMAN

26 Nov 2024 11:33:05,565 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,565 INFO : Inserting sp|P61026|RAB10_HUMAN

26 Nov 2024 11:33:05,568 INFO : 60% Done

26 Nov 2024 11:33:05,574 INFO : 61% Done

26 Nov 2024 11:33:05,580 INFO : 62% Done

26 Nov 2024 11:33:05,589 DEBUG: Total peptides inserted: 4

26 Nov 2024 11:33:05,589 INFO : Inserting sp|Q15582|BGH3_HUMAN

26 Nov 2024 11:33:05,592 INFO : 63% Done

26 Nov 2024 11:33:05,598 INFO : 64% Done

26 Nov 2024 11:33:05,607 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,608 INFO : 65% Done

26 Nov 2024 11:33:05,608 INFO : Inserting sp|P61981|1433G_HUMAN

26 Nov 2024 11:33:05,611 INFO : 66% Done

26 Nov 2024 11:33:05,621 INFO : 67% Done

26 Nov 2024 11:33:05,625 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,625 INFO : Inserting sp|Q96E17|RAB3C_HUMAN / sp|Q96DA2|RB39B_HUMAN / sp|P20336|RAB3A_HUMAN

26 Nov 2024 11:33:05,631 INFO : 68% Done

26 Nov 2024 11:33:05,635 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,635 INFO : Inserting sp|O14672|ADA10_HUMAN

26 Nov 2024 11:33:05,638 INFO : 69% Done

26 Nov 2024 11:33:05,649 INFO : 71% Done

26 Nov 2024 11:33:05,653 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,654 INFO : Inserting sp|P48735|IDHP_HUMAN

26 Nov 2024 11:33:05,660 INFO : 72% Done

26 Nov 2024 11:33:05,666 INFO : 73% Done

26 Nov 2024 11:33:05,677 INFO : 74% Done

26 Nov 2024 11:33:05,692 INFO : 75% Done

26 Nov 2024 11:33:05,697 INFO : 76% Done

26 Nov 2024 11:33:05,702 DEBUG: Total peptides inserted: 9

26 Nov 2024 11:33:05,702 INFO : Inserting sp|O43488|ARK72_HUMAN

26 Nov 2024 11:33:05,705 INFO : 77% Done

26 Nov 2024 11:33:05,714 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,714 INFO : Inserting sp|P36507|MP2K2_HUMAN

26 Nov 2024 11:33:05,717 INFO : 78% Done

26 Nov 2024 11:33:05,723 INFO : 79% Done

26 Nov 2024 11:33:05,727 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,727 INFO : Inserting sp|P27348|1433T_HUMAN

26 Nov 2024 11:33:05,730 INFO : 80% Done

26 Nov 2024 11:33:05,735 INFO : 81% Done

26 Nov 2024 11:33:05,739 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,739 INFO : Inserting sp|Q92930|RAB8B_HUMAN

26 Nov 2024 11:33:05,747 INFO : 82% Done

26 Nov 2024 11:33:05,751 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,751 INFO : Inserting sp|P60953|CDC42_HUMAN

26 Nov 2024 11:33:05,755 INFO : 83% Done

26 Nov 2024 11:33:05,759 DEBUG: Total peptides inserted: 1

26 Nov 2024 11:33:05,759 INFO : Inserting sp|P61006|RAB8A_HUMAN

26 Nov 2024 11:33:05,762 INFO : 84% Done

26 Nov 2024 11:33:05,771 DEBUG: Total peptides inserted: 2

26 Nov 2024 11:33:05,771 INFO : Inserting sp|P62258|1433E_HUMAN

26 Nov 2024 11:33:05,774 INFO : 85% Done

26 Nov 2024 11:33:05,779 INFO : 86% Done

26 Nov 2024 11:33:05,789 INFO : 87% Done

26 Nov 2024 11:33:05,793 INFO : 88% Done

26 Nov 2024 11:33:05,810 INFO : 89% Done

26 Nov 2024 11:33:05,814 DEBUG: Total peptides inserted: 7

26 Nov 2024 11:33:05,814 INFO : Inserting sp|P19367|HXK1_HUMAN

26 Nov 2024 11:33:05,817 INFO : 90% Done

26 Nov 2024 11:33:05,827 INFO : 91% Done

26 Nov 2024 11:33:05,833 INFO : 92% Done

26 Nov 2024 11:33:05,837 INFO : 93% Done

26 Nov 2024 11:33:05,845 DEBUG: Total peptides inserted: 6

26 Nov 2024 11:33:05,846 INFO : 94% Done

26 Nov 2024 11:33:05,846 INFO : Inserting sp|O00410|IPO5_HUMAN

26 Nov 2024 11:33:05,853 INFO : 95% Done

26 Nov 2024 11:33:05,860 DEBUG: Total peptides inserted: 3

26 Nov 2024 11:33:05,861 INFO : Inserting sp|P63000|RAC1_HUMAN

26 Nov 2024 11:33:05,864 INFO : 96% Done

26 Nov 2024 11:33:05,869 INFO : 97% Done

26 Nov 2024 11:33:05,875 INFO : 98% Done

26 Nov 2024 11:33:05,882 DEBUG: Total peptides inserted: 4

26 Nov 2024 11:33:05,882 INFO : Done parsing Skyline document.

26 Nov 2024 11:33:05,924 INFO : Creating and populating temp tables for Proportion values

26 Nov 2024 11:33:05,929 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

26 Nov 2024 11:33:05,938 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

26 Nov 2024 11:33:05,945 INFO : Cleaning up temp tables

26 Nov 2024 11:33:06,195 INFO : Completed import of Skyline document from EVplasma_wide_crudetargetsonly_2024-11-26_11-32-53.sky.zip

26 Nov 2024 11:33:06,197 INFO : 100% Done

26 Nov 2024 11:33:06,456 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'