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Targeted MS Runs
EVplasma_wide_crudetargetsonly_2024-11-26_11-32-53.sky.zip
Plasma EV crude peptide testing
Document Summary
EVplasma_wide_crudetargetsonly_2024-11-26_11-32-53.sky.zip
205 MB
SkyP file (link only, 1KB)
Full Skyline file
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1 version
43 proteins
,
133 peptides
,
133 precursors
,
1,136 transitions
-
2 replicates
- Skyline-daily (64-bit) 24.1.1.284 (bc93c2813)
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sp|P59190|RAB15_HUMAN
Ras-related protein Rab-15 OS=Homo sapiens OX=9606 GN=RAB15 PE=1 SV=1
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LLLIGDSGVGK
is_unique: false
0
1070.6336
LLLIGDSGVGK
light
2+
536.3241
1070.6336
9
0.0000
sp|Q92928|RAB1C_HUMAN
Putative Ras-related protein Rab-1C OS=Homo sapiens OX=9606 GN=RAB1C PE=5 SV=2
Peptide
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LLLIGDSGVGK
is_unique: false
0
1070.6336
LLLIGDSGVGK
light
2+
536.3241
1070.6336
9
0.0000
LQIWDTAGQER
is_unique: false
0
1315.6521
LQIWDTAGQER
light
2+
658.8333
1315.6521
9
0.0000
sp|P20338|RAB4A_HUMAN / sp|Q86YS6|RAB43_HUMAN / sp|Q6IQ22|RAB12_HUMAN / sp|P20337|RAB3B_HUMAN / sp|P61018|RAB4B_HUMAN
Ras-related protein Rab-4A OS=Homo sapiens OX=9606 GN=RAB4A PE=1 SV=3
Ras-related protein Rab-43 OS=Homo sapiens OX=9606 GN=RAB43 PE=1 SV=1
Ras-related protein Rab-12 OS=Homo sapiens OX=9606 GN=RAB12 PE=1 SV=3
Ras-related protein Rab-3B OS=Homo sapiens OX=9606 GN=RAB3B PE=1 SV=2
Ras-related protein Rab-4B OS=Homo sapiens OX=9606 GN=RAB4B PE=1 SV=1
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LQIWDTAGQER
is_unique: false
0
1315.6521
LQIWDTAGQER
light
2+
658.8333
1315.6521
9
0.0000
sp|Q8NHP1|ARK74_HUMAN
Aflatoxin B1 aldehyde reductase member 4 OS=Homo sapiens OX=9606 GN=AKR7L PE=2 SV=7
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FYAYNPLAGGLLTGK
is_unique: false
0
1583.8348
FYAYNPLAGGLLTGK
light
2+
792.9247
1583.8348
9
0.0000
sp|P17081|RHOQ_HUMAN / sp|Q9H4E5|RHOJ_HUMAN
Rho-related GTP-binding protein RhoQ OS=Homo sapiens OX=9606 GN=RHOQ PE=1 SV=2
Rho-related GTP-binding protein RhoJ OS=Homo sapiens OX=9606 GN=RHOJ PE=1 SV=1
Peptide
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C
VVVGDGAVGK
is_unique: false
0
1059.5383
C
VVVGDGAVGK
light
2+
530.7764
1059.5383
9
0.0000
sp|Q96AX2|RAB37_HUMAN
Ras-related protein Rab-37 OS=Homo sapiens OX=9606 GN=RAB37 PE=1 SV=3
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CE
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LQIWDTAGQER
is_unique: false
0
1315.6521
LQIWDTAGQER
light
2+
658.8333
1315.6521
9
0.0000
sp|P37802|TAGL2_HUMAN
Transgelin-2 OS=Homo sapiens OX=9606 GN=TAGLN2 PE=1 SV=3
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QMEQISQFLQAAER
is_unique: false
0
1677.8145
QMEQISQFLQAAER
light
3+
560.2788
1677.8145
9
0.0000
YGINTTDIFQTVDLWEGK
is_unique: false
0
2099.0211
YGINTTDIFQTVDLWEGK
light
3+
700.6810
2099.0211
9
0.0000
NMA
C
VQR
is_unique: false
0
877.3898
NMA
C
VQR
light
2+
439.7022
877.3898
8
0.0000
TLMNLGGLAVAR
is_unique: false
0
1214.6805
TLMNLGGLAVAR
light
2+
608.3475
1214.6805
9
0.0000
NVIGLQMGTNR
is_unique: false
0
1201.6237
NVIGLQMGTNR
light
2+
601.8191
1201.6237
9
0.0000
sp|P63104|1433Z_HUMAN
14-3-3 protein zeta/delta OS=Homo sapiens OX=9606 GN=YWHAZ PE=1 SV=1
Peptide
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LAEQAERYDDMAA
C
MK
is_unique: false
1
1900.8118
LAEQAERYDDMAA
C
MK
light
3+
634.6112
1900.8118
9
0.0000
YDDMAA
C
MK
is_unique: false
0
1103.4086
YDDMAA
C
MK
light
2+
552.7116
1103.4086
9
0.0000
IETELRDI
C
NDVLSLLEK
is_unique: false
1
2159.1144
IETELRDI
C
NDVLSLLEK
light
3+
720.7121
2159.1144
9
0.0000
DI
C
NDVLSLLEK
is_unique: false
0
1417.7123
DI
C
NDVLSLLEK
light
2+
709.8634
1417.7123
9
0.0000
MKGDYYR
is_unique: false
1
931.4222
MKGDYYR
light
2+
466.7184
931.4222
7
0.0000
YLAEVAAGDDKK
is_unique: false
1
1278.6456
YLAEVAAGDDKK
light
3+
427.2225
1278.6456
9
0.0000
KGIVDQSQQAYQEAFEISK
is_unique: false
1
2168.0750
KGIVDQSQQAYQEAFEISK
light
3+
723.6989
2168.0750
9
0.0000
GIVDQSQQAYQEAFEISK
is_unique: false
0
2039.9800
GIVDQSQQAYQEAFEISK
light
3+
681.0006
2039.9800
9
0.0000
DSTLIMQLLR
is_unique: false
0
1188.6536
DSTLIMQLLR
light
2+
595.3341
1188.6536
9
0.0000
sp|P55072|TERA_HUMAN
Transitional endoplasmic reticulum ATPase OS=Homo sapiens OX=9606 GN=VCP PE=1 SV=4
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LIVDEAINEDNSVVSLSQPK
is_unique: false
0
2169.1165
LIVDEAINEDNSVVSLSQPK
light
3+
724.0461
2169.1165
9
0.0000
MDELQLFR
is_unique: false
0
1050.5168
MDELQLFR
light
2+
526.2657
1050.5168
6
0.0000
EAV
C
IVLSDDT
C
SDEKIR
is_unique: false
1
2108.9718
EAV
C
IVLSDDT
C
SDEKIR
light
3+
703.9979
2108.9718
9
0.0000
LGDVISIQP
C
PDVK
is_unique: false
0
1539.7967
LGDVISIQP
C
PDVK
light
2+
770.9056
1539.7967
9
0.0000
KGDIFLVR
is_unique: false
1
946.5600
KGDIFLVR
light
2+
474.2873
946.5600
9
0.0000
EMVELPLRHPALFK
is_unique: false
1
1678.9229
EMVELPLRHPALFK
light
3+
560.6482
1678.9229
7
0.0000
GILLYGPPGTGK
is_unique: false
0
1171.6601
GILLYGPPGTGK
light
2+
586.8373
1171.6601
9
0.0000
AVANETGAFFFLINGPEIMSK
is_unique: false
0
2255.1296
AVANETGAFFFLINGPEIMSK
light
3+
752.7172
2255.1296
9
0.0000
LAGESESNLR
is_unique: false
0
1074.5306
LAGESESNLR
light
2+
538.2726
1074.5306
5
0.0000
NAPAIIFIDELDAIAPKR
is_unique: false
1
1966.0888
NAPAIIFIDELDAIAPKR
light
3+
656.3702
1966.0888
9
0.0000
IVSQLLTLMDGLK
is_unique: false
0
1429.8214
IVSQLLTLMDGLK
light
2+
715.9180
1429.8214
9
0.0000
AHVIVMAATNRPNSIDPALR
is_unique: false
0
2145.1477
AHVIVMAATNRPNSIDPALR
light
3+
716.0565
2145.1477
9
0.0000
EVDIGIPDATGRLEILQIHTK
is_unique: false
1
2317.2642
EVDIGIPDATGRLEILQIHTK
light
3+
773.4287
2317.2642
9
0.0000
ETVVEVPQVTWEDIGGLEDVKR
is_unique: false
1
2497.2700
ETVVEVPQVTWEDIGGLEDVKR
light
3+
833.4306
2497.2700
9
0.0000
ELQELVQYPVEHPDKFLK
is_unique: false
1
2211.1576
ELQELVQYPVEHPDKFLK
light
3+
738.0598
2211.1576
9
0.0000
AIANE
C
QANFISIK
is_unique: false
0
1577.7872
AIANE
C
QANFISIK
light
2+
789.9009
1577.7872
9
0.0000
QAAP
C
VLFFDELDSIAK
is_unique: false
0
1922.9448
QAAP
C
VLFFDELDSIAK
light
2+
962.4797
1922.9448
9
0.0000
VINQILTEMDGMSTK
is_unique: false
0
1678.8270
VINQILTEMDGMSTK
light
2+
840.4208
1678.8270
9
0.0000
LDQLIYIPLPDEK
is_unique: false
0
1555.8498
LDQLIYIPLPDEK
light
2+
778.9322
1555.8498
9
0.0000
DVDLEFLAK
is_unique: false
0
1048.5441
DVDLEFLAK
light
2+
525.2793
1048.5441
7
0.0000
sp|P27797|CALR_HUMAN
Calreticulin OS=Homo sapiens OX=9606 GN=CALR PE=1 SV=1
Peptide
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Missed Cleavages
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Peptide Neutral Mass
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Rank
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Precursor
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Label
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Q1 Z
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Transition Count
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CE
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DP
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HEQNID
C
GGGYVK
is_unique: false
0
1475.6463
HEQNID
C
GGGYVK
light
2+
738.8304
1475.6463
9
0.0000
VHVIFNYK
is_unique: false
0
1018.5600
VHVIFNYK
light
2+
510.2873
1018.5600
9
0.0000
QIDNPDYK
is_unique: false
0
991.4611
QIDNPDYK
light
2+
496.7378
991.4611
6
0.0000