26 Aug 2021 08:42:51,394 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

26 Aug 2021 08:42:51,399 INFO : Starting to import Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-26_11-42-43.sky.zip

26 Aug 2021 08:42:51,399 INFO : Expanding 20210521_Mix_1_and_2_no_IS.blib

26 Aug 2021 08:42:51,402 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.skyd

26 Aug 2021 08:42:51,777 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.sky

26 Aug 2021 08:42:51,813 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.22

26 Aug 2021 08:42:51,825 INFO : 2% Done

26 Aug 2021 08:42:51,991 DEBUG: Starting to load chromatogram headers

26 Aug 2021 08:42:51,997 DEBUG: Done loading chromatogram headers

26 Aug 2021 08:42:52,177 INFO : Inserting Precursors_Mix_1

26 Aug 2021 08:42:52,187 INFO : 4% Done

26 Aug 2021 08:42:52,232 INFO : 7% Done

26 Aug 2021 08:42:52,271 INFO : 10% Done

26 Aug 2021 08:42:52,309 INFO : 12% Done

26 Aug 2021 08:42:52,351 INFO : 14% Done

26 Aug 2021 08:42:52,395 INFO : 17% Done

26 Aug 2021 08:42:52,442 INFO : 20% Done

26 Aug 2021 08:42:52,478 INFO : 22% Done

26 Aug 2021 08:42:52,516 INFO : 25% Done

26 Aug 2021 08:42:52,560 INFO : 27% Done

26 Aug 2021 08:42:52,599 INFO : 30% Done

26 Aug 2021 08:42:52,637 INFO : 32% Done

26 Aug 2021 08:42:52,672 INFO : 35% Done

26 Aug 2021 08:42:52,711 INFO : 38% Done

26 Aug 2021 08:42:52,746 INFO : 40% Done

26 Aug 2021 08:42:52,778 INFO : 43% Done

26 Aug 2021 08:42:52,813 INFO : 46% Done

26 Aug 2021 08:42:52,847 INFO : 48% Done

26 Aug 2021 08:42:52,883 INFO : 50% Done

26 Aug 2021 08:42:52,917 INFO : 53% Done

26 Aug 2021 08:42:52,955 INFO : 56% Done

26 Aug 2021 08:42:52,990 INFO : 58% Done

26 Aug 2021 08:42:53,029 INFO : 60% Done

26 Aug 2021 08:42:53,058 DEBUG: Total molecules inserted: 23

26 Aug 2021 08:42:53,059 INFO : Done parsing Skyline document.

26 Aug 2021 08:42:53,064 INFO : No group comparisons found.

26 Aug 2021 08:42:53,064 INFO : Calculating calibration curves

26 Aug 2021 08:42:53,065 DEBUG: Calculating calibration curve for Precursors_Mix_1, 1 of 1

26 Aug 2021 08:42:53,344 INFO : 68% Done

26 Aug 2021 08:42:53,349 INFO : Done calculating calibration curves.

26 Aug 2021 08:42:54,601 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_OLD_CON.raw in QC folder. 1 of 41

26 Aug 2021 08:42:54,603 INFO : 69% Done

26 Aug 2021 08:42:55,579 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_04.raw in QC folder. 2 of 41

26 Aug 2021 08:42:55,582 INFO : 70% Done

26 Aug 2021 08:42:56,616 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_05.raw in QC folder. 3 of 41

26 Aug 2021 08:42:57,584 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj8.raw in QC folder. 4 of 41

26 Aug 2021 08:42:57,586 INFO : 71% Done

26 Aug 2021 08:42:58,581 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON_A.raw in QC folder. 5 of 41

26 Aug 2021 08:42:58,583 INFO : 72% Done

26 Aug 2021 08:42:59,603 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_04.raw in QC folder. 6 of 41

26 Aug 2021 08:42:59,605 INFO : 73% Done

26 Aug 2021 08:43:00,625 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_03.raw in QC folder. 7 of 41

26 Aug 2021 08:43:01,617 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj9.raw in QC folder. 8 of 41

26 Aug 2021 08:43:01,619 INFO : 74% Done

26 Aug 2021 08:43:02,644 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj3.raw in QC folder. 9 of 41

26 Aug 2021 08:43:02,647 INFO : 75% Done

26 Aug 2021 08:43:03,646 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_12.raw in QC folder. 10 of 41

26 Aug 2021 08:43:04,646 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_06.raw in QC folder. 11 of 41

26 Aug 2021 08:43:04,648 INFO : 76% Done

26 Aug 2021 08:43:05,652 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON_A.raw in QC folder. 12 of 41

26 Aug 2021 08:43:05,654 INFO : 77% Done

26 Aug 2021 08:43:06,685 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON.raw in QC folder. 13 of 41

26 Aug 2021 08:43:06,687 INFO : 78% Done

26 Aug 2021 08:43:07,690 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_800QC_A.raw in QC folder. 14 of 41

26 Aug 2021 08:43:08,800 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_01.raw in QC folder. 15 of 41

26 Aug 2021 08:43:08,803 INFO : 79% Done

26 Aug 2021 08:43:09,810 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_02.raw in QC folder. 16 of 41

26 Aug 2021 08:43:09,812 INFO : 80% Done

26 Aug 2021 08:43:10,869 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_03.raw in QC folder. 17 of 41

26 Aug 2021 08:43:11,923 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_07.raw in QC folder. 18 of 41

26 Aug 2021 08:43:11,925 INFO : 81% Done

26 Aug 2021 08:43:12,957 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210330_800CON.raw in QC folder. 19 of 41

26 Aug 2021 08:43:12,960 INFO : 82% Done

26 Aug 2021 08:43:13,983 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj4.raw in QC folder. 20 of 41

26 Aug 2021 08:43:13,986 INFO : 83% Done

26 Aug 2021 08:43:14,991 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON.raw in QC folder. 21 of 41

26 Aug 2021 08:43:15,995 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_07.raw in QC folder. 22 of 41

26 Aug 2021 08:43:15,997 INFO : 84% Done

26 Aug 2021 08:43:17,019 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON.raw in QC folder. 23 of 41

26 Aug 2021 08:43:17,021 INFO : 85% Done

26 Aug 2021 08:43:18,026 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj1.raw in QC folder. 24 of 41

26 Aug 2021 08:43:18,029 INFO : 86% Done

26 Aug 2021 08:43:19,018 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_11.raw in QC folder. 25 of 41

26 Aug 2021 08:43:20,035 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_01.raw in QC folder. 26 of 41

26 Aug 2021 08:43:20,037 INFO : 87% Done

26 Aug 2021 08:43:21,029 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON_20210614161228.raw in QC folder. 27 of 41

26 Aug 2021 08:43:21,031 INFO : 88% Done

26 Aug 2021 08:43:22,122 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_02.raw in QC folder. 28 of 41

26 Aug 2021 08:43:23,220 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_02.raw in QC folder. 29 of 41

26 Aug 2021 08:43:23,222 INFO : 89% Done

26 Aug 2021 08:43:24,308 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_08.raw in QC folder. 30 of 41

26 Aug 2021 08:43:24,310 INFO : 90% Done

26 Aug 2021 08:43:25,357 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_10.raw in QC folder. 31 of 41

26 Aug 2021 08:43:25,359 INFO : 91% Done

26 Aug 2021 08:43:26,448 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210323_800CON.raw in QC folder. 32 of 41

26 Aug 2021 08:43:27,547 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON.raw in QC folder. 33 of 41

26 Aug 2021 08:43:27,550 INFO : 92% Done

26 Aug 2021 08:43:28,692 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj5.raw in QC folder. 34 of 41

26 Aug 2021 08:43:28,694 INFO : 93% Done

26 Aug 2021 08:43:29,780 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj2.raw in QC folder. 35 of 41

26 Aug 2021 08:43:29,783 INFO : 94% Done

26 Aug 2021 08:43:30,877 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj7.raw in QC folder. 36 of 41

26 Aug 2021 08:43:31,945 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210825_800CON_03.raw in QC folder. 37 of 41

26 Aug 2021 08:43:31,948 INFO : 95% Done

26 Aug 2021 08:43:32,971 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_04.raw in QC folder. 38 of 41

26 Aug 2021 08:43:32,974 INFO : 96% Done

26 Aug 2021 08:43:34,005 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_01.raw in QC folder. 39 of 41

26 Aug 2021 08:43:34,007 INFO : 97% Done

26 Aug 2021 08:43:35,047 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj6.raw in QC folder. 40 of 41

26 Aug 2021 08:43:36,120 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_09.raw in QC folder. 41 of 41

26 Aug 2021 08:43:36,123 INFO : 98% Done

26 Aug 2021 08:43:36,123 INFO : Done updating previously imported sample file data.

26 Aug 2021 08:43:36,734 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-26_11-41-40.sky.zip have been updated with newer data.

26 Aug 2021 08:43:36,735 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-26_11-41-40.sky.zip

26 Aug 2021 08:43:36,735 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-08-26_11-41-40

26 Aug 2021 08:43:36,735 INFO : Creating and populating temp tables for Proportion values

26 Aug 2021 08:43:36,759 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

26 Aug 2021 08:43:36,851 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

26 Aug 2021 08:43:36,882 INFO : Cleaning up temp tables

26 Aug 2021 08:43:37,120 INFO : Completed import of Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-26_11-42-43.sky.zip

26 Aug 2021 08:43:37,124 INFO : 100% Done

26 Aug 2021 08:43:37,164 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'