25 Aug 2021 08:11:08,966 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

25 Aug 2021 08:11:08,969 INFO : Starting to import Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-11-03.sky.zip

25 Aug 2021 08:11:08,969 INFO : Expanding 20210521_Mix_1_and_2_no_IS.blib

25 Aug 2021 08:11:08,971 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.skyd

25 Aug 2021 08:11:09,261 INFO : Expanding 20210630_Auto_QC_800_CON_Mix1.sky

25 Aug 2021 08:11:09,298 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.22

25 Aug 2021 08:11:09,306 INFO : 2% Done

25 Aug 2021 08:11:09,431 DEBUG: Starting to load chromatogram headers

25 Aug 2021 08:11:09,436 DEBUG: Done loading chromatogram headers

25 Aug 2021 08:11:09,568 INFO : Inserting Precursors_Mix_1

25 Aug 2021 08:11:09,577 INFO : 4% Done

25 Aug 2021 08:11:09,614 INFO : 7% Done

25 Aug 2021 08:11:09,645 INFO : 10% Done

25 Aug 2021 08:11:09,678 INFO : 12% Done

25 Aug 2021 08:11:09,710 INFO : 14% Done

25 Aug 2021 08:11:09,741 INFO : 17% Done

25 Aug 2021 08:11:09,774 INFO : 20% Done

25 Aug 2021 08:11:09,806 INFO : 22% Done

25 Aug 2021 08:11:09,839 INFO : 25% Done

25 Aug 2021 08:11:09,873 INFO : 28% Done

25 Aug 2021 08:11:09,909 INFO : 30% Done

25 Aug 2021 08:11:09,943 INFO : 32% Done

25 Aug 2021 08:11:09,978 INFO : 35% Done

25 Aug 2021 08:11:10,012 INFO : 38% Done

25 Aug 2021 08:11:10,047 INFO : 40% Done

25 Aug 2021 08:11:10,080 INFO : 43% Done

25 Aug 2021 08:11:10,114 INFO : 45% Done

25 Aug 2021 08:11:10,145 INFO : 48% Done

25 Aug 2021 08:11:10,177 INFO : 50% Done

25 Aug 2021 08:11:10,208 INFO : 53% Done

25 Aug 2021 08:11:10,239 INFO : 56% Done

25 Aug 2021 08:11:10,270 INFO : 58% Done

25 Aug 2021 08:11:10,302 INFO : 60% Done

25 Aug 2021 08:11:10,326 DEBUG: Total molecules inserted: 23

25 Aug 2021 08:11:10,326 INFO : Done parsing Skyline document.

25 Aug 2021 08:11:10,330 INFO : No group comparisons found.

25 Aug 2021 08:11:10,330 INFO : Calculating calibration curves

25 Aug 2021 08:11:10,331 DEBUG: Calculating calibration curve for Precursors_Mix_1, 1 of 1

25 Aug 2021 08:11:10,617 INFO : 68% Done

25 Aug 2021 08:11:10,622 INFO : Done calculating calibration curves.

25 Aug 2021 08:11:11,736 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_OLD_CON.raw in QC folder. 1 of 36

25 Aug 2021 08:11:11,738 INFO : 69% Done

25 Aug 2021 08:11:12,704 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_04.raw in QC folder. 2 of 36

25 Aug 2021 08:11:12,706 INFO : 70% Done

25 Aug 2021 08:11:13,668 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_05.raw in QC folder. 3 of 36

25 Aug 2021 08:11:14,627 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj8.raw in QC folder. 4 of 36

25 Aug 2021 08:11:14,629 INFO : 71% Done

25 Aug 2021 08:11:15,591 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON_A.raw in QC folder. 5 of 36

25 Aug 2021 08:11:15,593 INFO : 72% Done

25 Aug 2021 08:11:16,615 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_03.raw in QC folder. 6 of 36

25 Aug 2021 08:11:16,618 INFO : 73% Done

25 Aug 2021 08:11:17,587 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj9.raw in QC folder. 7 of 36

25 Aug 2021 08:11:17,590 INFO : 74% Done

25 Aug 2021 08:11:18,566 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj3.raw in QC folder. 8 of 36

25 Aug 2021 08:11:18,569 INFO : 75% Done

25 Aug 2021 08:11:19,534 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_12.raw in QC folder. 9 of 36

25 Aug 2021 08:11:19,536 INFO : 76% Done

25 Aug 2021 08:11:20,532 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_06.raw in QC folder. 10 of 36

25 Aug 2021 08:11:21,496 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON_A.raw in QC folder. 11 of 36

25 Aug 2021 08:11:21,498 INFO : 77% Done

25 Aug 2021 08:11:22,480 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON.raw in QC folder. 12 of 36

25 Aug 2021 08:11:22,482 INFO : 78% Done

25 Aug 2021 08:11:23,459 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210630_800QC_A.raw in QC folder. 13 of 36

25 Aug 2021 08:11:23,461 INFO : 79% Done

25 Aug 2021 08:11:24,436 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_02.raw in QC folder. 14 of 36

25 Aug 2021 08:11:24,438 INFO : 80% Done

25 Aug 2021 08:11:25,395 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_03.raw in QC folder. 15 of 36

25 Aug 2021 08:11:25,398 INFO : 81% Done

25 Aug 2021 08:11:26,363 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_07.raw in QC folder. 16 of 36

25 Aug 2021 08:11:27,322 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210330_800CON.raw in QC folder. 17 of 36

25 Aug 2021 08:11:27,324 INFO : 82% Done

25 Aug 2021 08:11:28,325 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj4.raw in QC folder. 18 of 36

25 Aug 2021 08:11:28,327 INFO : 83% Done

25 Aug 2021 08:11:29,294 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210608-SRP_DB_Batch_11-12_MF_CON.raw in QC folder. 19 of 36

25 Aug 2021 08:11:29,296 INFO : 84% Done

25 Aug 2021 08:11:30,285 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON.raw in QC folder. 20 of 36

25 Aug 2021 08:11:30,287 INFO : 85% Done

25 Aug 2021 08:11:31,252 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj1.raw in QC folder. 21 of 36

25 Aug 2021 08:11:32,248 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_11.raw in QC folder. 22 of 36

25 Aug 2021 08:11:32,252 INFO : 86% Done

25 Aug 2021 08:11:33,220 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210629_Curve_800CON_01.raw in QC folder. 23 of 36

25 Aug 2021 08:11:33,223 INFO : 87% Done

25 Aug 2021 08:11:34,210 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210611-Water_Samples_800CON_20210614161228.raw in QC folder. 24 of 36

25 Aug 2021 08:11:34,212 INFO : 88% Done

25 Aug 2021 08:11:35,172 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_02.raw in QC folder. 25 of 36

25 Aug 2021 08:11:35,174 INFO : 89% Done

25 Aug 2021 08:11:36,179 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_08.raw in QC folder. 26 of 36

25 Aug 2021 08:11:36,181 INFO : 90% Done

25 Aug 2021 08:11:37,148 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_10.raw in QC folder. 27 of 36

25 Aug 2021 08:11:37,150 INFO : 91% Done

25 Aug 2021 08:11:38,123 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210323_800CON.raw in QC folder. 28 of 36

25 Aug 2021 08:11:39,106 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_800CON.raw in QC folder. 29 of 36

25 Aug 2021 08:11:39,108 INFO : 92% Done

25 Aug 2021 08:11:40,085 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj5.raw in QC folder. 30 of 36

25 Aug 2021 08:11:40,087 INFO : 93% Done

25 Aug 2021 08:11:41,176 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj2.raw in QC folder. 31 of 36

25 Aug 2021 08:11:41,178 INFO : 94% Done

25 Aug 2021 08:11:42,209 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj7.raw in QC folder. 32 of 36

25 Aug 2021 08:11:42,211 INFO : 95% Done

25 Aug 2021 08:11:43,193 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_04.raw in QC folder. 33 of 36

25 Aug 2021 08:11:43,195 INFO : 96% Done

25 Aug 2021 08:11:44,145 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_01.raw in QC folder. 34 of 36

25 Aug 2021 08:11:45,113 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210210_large_800CON_inj6.raw in QC folder. 35 of 36

25 Aug 2021 08:11:45,115 INFO : 97% Done

25 Aug 2021 08:11:46,141 DEBUG: Updating previously imported data for sample file D:\AutoQC\raw files\20210506_CON_09.raw in QC folder. 36 of 36

25 Aug 2021 08:11:46,145 INFO : 98% Done

25 Aug 2021 08:11:46,145 INFO : Done updating previously imported sample file data.

25 Aug 2021 08:11:46,710 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-07-02_15-41-01.sky.zip have been updated with newer data.

25 Aug 2021 08:11:46,710 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-07-02_15-41-01.sky.zip

25 Aug 2021 08:11:46,710 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/JRE OE240 PFAS/@files/20210630_Auto_QC_800_CON_Mix1_2021-07-02_15-41-01

25 Aug 2021 08:11:46,710 INFO : Creating and populating temp tables for Proportion values

25 Aug 2021 08:11:46,732 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

25 Aug 2021 08:11:46,806 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

25 Aug 2021 08:11:46,832 INFO : Cleaning up temp tables

25 Aug 2021 08:11:47,065 INFO : Completed import of Skyline document from 20210630_Auto_QC_800_CON_Mix1_2021-08-25_11-11-03.sky.zip

25 Aug 2021 08:11:47,068 INFO : 100% Done

25 Aug 2021 08:11:47,098 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'