Skyline document import - LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky.zip

P100_GctMaker

Job Status

Created: 2020-12-23 14:32:37
Modified: 2020-12-23 20:45:42
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Skyline document import - LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky.zip
File Path: /data/labkey/files/LINCS/Publications/Touchstone_2/P100_GctMaker/@files/LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky_2020-12-23_14-32-56.log
Files: LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky_2020-12-23_14-32-56.log
Completed Runs: LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky.zip

Log File


23 Dec 2020 20:22:59,353 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Dec 2020 20:22:59,382 INFO : Starting to import Skyline document from LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky.zip
23 Dec 2020 20:22:59,389 INFO : Expanding LINCS_P100_PRM_Plate18_annotated_minimized.skyd
23 Dec 2020 20:23:02,338 INFO : Expanding LINCS_P100_PRM_Plate18_annotated_minimized.sky.view
23 Dec 2020 20:23:02,356 INFO : Expanding LINCS_P100_PRM_Plate18_annotated_minimized.sky
23 Dec 2020 20:23:02,844 INFO : 1% Done
23 Dec 2020 20:23:06,363 INFO : Inserting NANS_CL01
23 Dec 2020 20:23:06,377 INFO : 2% Done
23 Dec 2020 20:23:07,166 INFO : Inserting AHNAK_CL01
23 Dec 2020 20:23:08,552 INFO : Inserting DDX54_CL02
23 Dec 2020 20:23:08,563 INFO : 4% Done
23 Dec 2020 20:23:09,381 INFO : Inserting HSPC216_CL02
23 Dec 2020 20:23:09,391 INFO : 5% Done
23 Dec 2020 20:23:10,129 INFO : Inserting PFKF_CL03
23 Dec 2020 20:23:10,139 INFO : 6% Done
23 Dec 2020 20:23:10,934 INFO : Inserting TMSL3_CL03
23 Dec 2020 20:23:11,951 INFO : 7% Done
23 Dec 2020 20:23:13,555 INFO : Inserting AD029_CL04
23 Dec 2020 20:23:13,565 INFO : 8% Done
23 Dec 2020 20:23:14,829 INFO : Inserting CDC2_CL04
23 Dec 2020 20:23:14,839 INFO : 9% Done
23 Dec 2020 20:23:16,007 INFO : Inserting ATAD2_CL05
23 Dec 2020 20:23:16,017 INFO : 10% Done
23 Dec 2020 20:23:16,921 INFO : Inserting BAT2D1_CL05
23 Dec 2020 20:23:17,878 INFO : Inserting AGS1_CL06
23 Dec 2020 20:23:18,663 INFO : Inserting A2D_CL07
23 Dec 2020 20:23:18,674 INFO : 11% Done
23 Dec 2020 20:23:19,843 INFO : Inserting ZNF672_CL07
23 Dec 2020 20:23:19,852 INFO : 12% Done
23 Dec 2020 20:23:20,575 INFO : Inserting ABI1_CL08
23 Dec 2020 20:23:20,585 INFO : 13% Done
23 Dec 2020 20:23:21,747 INFO : Inserting FOSL2_CL08
23 Dec 2020 20:23:21,758 INFO : 14% Done
23 Dec 2020 20:23:24,292 INFO : Inserting C17orf85_CL09
23 Dec 2020 20:23:24,307 INFO : 16% Done
23 Dec 2020 20:23:26,447 INFO : Inserting EPLIN_CL09
23 Dec 2020 20:23:26,457 INFO : 17% Done
23 Dec 2020 20:23:27,503 INFO : Inserting BAF155_CL10
23 Dec 2020 20:23:27,512 INFO : 18% Done
23 Dec 2020 20:23:28,400 INFO : Inserting FUBP2_CL10
23 Dec 2020 20:23:29,395 INFO : Inserting MAP3K2_CL11
23 Dec 2020 20:23:30,482 INFO : Inserting FAS_CL12
23 Dec 2020 20:23:30,495 INFO : 19% Done
23 Dec 2020 20:23:31,986 INFO : 20% Done
23 Dec 2020 20:23:33,155 INFO : Inserting ARM2_CL13
23 Dec 2020 20:23:33,164 INFO : 21% Done
23 Dec 2020 20:23:33,937 INFO : Inserting C9orf88_CL14
23 Dec 2020 20:23:33,950 INFO : 22% Done
23 Dec 2020 20:23:35,504 INFO : Inserting ISPK1_CL14
23 Dec 2020 20:23:35,514 INFO : 23% Done
23 Dec 2020 20:23:36,820 INFO : Inserting RBM14_CL15
23 Dec 2020 20:23:36,829 INFO : 24% Done
23 Dec 2020 20:23:37,895 INFO : Inserting KIAA0701_CL15
23 Dec 2020 20:23:37,929 INFO : 25% Done
23 Dec 2020 20:23:40,156 INFO : Inserting RBM17_CL16
23 Dec 2020 20:23:40,166 INFO : 26% Done
23 Dec 2020 20:23:41,829 INFO : Inserting SLC38A1_CL16
23 Dec 2020 20:23:42,378 INFO : Inserting NOC2L_CL17
23 Dec 2020 20:23:42,389 INFO : 27% Done
23 Dec 2020 20:23:43,512 INFO : Inserting RPL12_CL17
23 Dec 2020 20:23:43,522 INFO : 28% Done
23 Dec 2020 20:23:44,287 INFO : Inserting DDX48_CL18
23 Dec 2020 20:23:44,296 INFO : 30% Done
23 Dec 2020 20:23:45,672 INFO : Inserting HCA90_CL18
23 Dec 2020 20:23:45,683 INFO : 31% Done
23 Dec 2020 20:23:46,546 INFO : Inserting CAT53_CL19
23 Dec 2020 20:23:46,555 INFO : 32% Done
23 Dec 2020 20:23:47,155 INFO : Inserting EPLIN_CL19
23 Dec 2020 20:23:47,165 INFO : 33% Done
23 Dec 2020 20:23:47,850 INFO : Inserting HBXAP_CL21
23 Dec 2020 20:23:47,861 INFO : 34% Done
23 Dec 2020 20:23:48,580 INFO : Inserting DCAF1_CL22
23 Dec 2020 20:23:49,177 INFO : Inserting CDW2_CL22
23 Dec 2020 20:23:49,188 INFO : 35% Done
23 Dec 2020 20:23:49,970 INFO : Inserting ANLN_CL23
23 Dec 2020 20:23:49,981 INFO : 36% Done
23 Dec 2020 20:23:50,561 INFO : Inserting OCIA_CL23
23 Dec 2020 20:23:50,571 INFO : 37% Done
23 Dec 2020 20:23:51,181 INFO : Inserting FAM76B_CL24
23 Dec 2020 20:23:51,191 INFO : 38% Done
23 Dec 2020 20:23:51,938 INFO : Inserting HAT1_CL25
23 Dec 2020 20:23:52,545 INFO : Inserting BRAF_CL26
23 Dec 2020 20:23:52,554 INFO : 39% Done
23 Dec 2020 20:23:53,241 INFO : Inserting DYRK_CL27
23 Dec 2020 20:23:53,250 INFO : 40% Done
23 Dec 2020 20:23:53,891 INFO : Inserting LRWD1_CL27
23 Dec 2020 20:23:53,902 INFO : 41% Done
23 Dec 2020 20:23:54,645 INFO : Inserting ALS2_CL28
23 Dec 2020 20:23:54,655 INFO : 42% Done
23 Dec 2020 20:23:56,041 INFO : Inserting BRD4_CL29
23 Dec 2020 20:23:57,176 INFO : Inserting ZC3H14_CL29
23 Dec 2020 20:23:57,187 INFO : 43% Done
23 Dec 2020 20:23:58,550 INFO : Inserting KIF4_CL30
23 Dec 2020 20:23:58,560 INFO : 44% Done
23 Dec 2020 20:23:59,588 INFO : Inserting MAP3K7_CL30
23 Dec 2020 20:23:59,602 INFO : 45% Done
23 Dec 2020 20:24:01,009 INFO : Inserting KIAA0722_CL31
23 Dec 2020 20:24:01,019 INFO : 46% Done
23 Dec 2020 20:24:01,960 INFO : Inserting PAK2_CL31
23 Dec 2020 20:24:03,368 INFO : Inserting LAP2_CL32
23 Dec 2020 20:24:03,379 INFO : 47% Done
23 Dec 2020 20:24:05,041 INFO : Inserting BAT2_CL33
23 Dec 2020 20:24:05,052 INFO : 48% Done
23 Dec 2020 20:24:06,498 INFO : Inserting My038_CL33
23 Dec 2020 20:24:06,509 INFO : 50% Done
23 Dec 2020 20:24:08,082 INFO : Inserting EMK1_CL34
23 Dec 2020 20:24:09,402 INFO : Inserting WDR20_CL34
23 Dec 2020 20:24:09,412 INFO : 51% Done
23 Dec 2020 20:24:10,725 INFO : Inserting THRAP3_CL35
23 Dec 2020 20:24:10,734 INFO : 52% Done
23 Dec 2020 20:24:11,687 INFO : Inserting CAIN_CL35
23 Dec 2020 20:24:11,697 INFO : 53% Done
23 Dec 2020 20:24:12,899 INFO : Inserting GPATC8_CL37
23 Dec 2020 20:24:12,907 INFO : 54% Done
23 Dec 2020 20:24:13,618 INFO : Inserting RP11-373M8.1-002_CL37
23 Dec 2020 20:24:13,763 INFO : Inserting KIAA1734_CL38
23 Dec 2020 20:24:13,965 INFO : Inserting MAP4_CL38
23 Dec 2020 20:24:13,975 INFO : 55% Done
23 Dec 2020 20:24:14,183 INFO : Inserting KIAA0217_CL39
23 Dec 2020 20:24:14,192 INFO : 56% Done
23 Dec 2020 20:24:14,388 INFO : Inserting CTG26_CL40
23 Dec 2020 20:24:14,397 INFO : 57% Done
23 Dec 2020 20:24:14,587 INFO : Inserting KIAA1991_CL40
23 Dec 2020 20:24:14,597 INFO : 58% Done
23 Dec 2020 20:24:14,790 INFO : Inserting DBP2_CL41
23 Dec 2020 20:24:14,992 INFO : Inserting ARS2_CL42
23 Dec 2020 20:24:15,002 INFO : 60% Done
23 Dec 2020 20:24:15,167 INFO : Inserting KIAA1321_CL42
23 Dec 2020 20:24:15,195 INFO : 61% Done
23 Dec 2020 20:24:15,370 INFO : Inserting MAPKAPK1A_CL43
23 Dec 2020 20:24:15,380 INFO : 62% Done
23 Dec 2020 20:24:15,743 INFO : Inserting C22orf9_CL43
23 Dec 2020 20:24:15,753 INFO : 63% Done
23 Dec 2020 20:24:15,949 INFO : Inserting KIAA1844_CL44
23 Dec 2020 20:24:15,959 INFO : 64% Done
23 Dec 2020 20:24:16,157 INFO : Inserting CCNYL1_CL45
23 Dec 2020 20:24:16,168 INFO : 65% Done
23 Dec 2020 20:24:16,352 INFO : Inserting OK/SW-cl.2_CL46
23 Dec 2020 20:24:16,360 INFO : 66% Done
23 Dec 2020 20:24:16,537 INFO : Inserting PDK1_CL46
23 Dec 2020 20:24:16,741 INFO : Inserting PLEC1_CL47
23 Dec 2020 20:24:16,751 INFO : 67% Done
23 Dec 2020 20:24:16,971 INFO : 68% Done
23 Dec 2020 20:24:17,172 INFO : Inserting CASC3_CL48
23 Dec 2020 20:24:17,185 INFO : 69% Done
23 Dec 2020 20:24:17,404 INFO : Inserting BAT2D1_CL48
23 Dec 2020 20:24:17,594 INFO : Inserting LAP2_CL49
23 Dec 2020 20:24:17,604 INFO : 70% Done
23 Dec 2020 20:24:17,803 INFO : Inserting TB7_CL49
23 Dec 2020 20:24:17,814 INFO : 71% Done
23 Dec 2020 20:24:18,035 INFO : Inserting IQGAP3_CL50
23 Dec 2020 20:24:18,046 INFO : 72% Done
23 Dec 2020 20:24:18,272 INFO : Inserting NFATC2IP_CL50
23 Dec 2020 20:24:18,283 INFO : 73% Done
23 Dec 2020 20:24:18,480 INFO : Inserting BAF45D_CL51
23 Dec 2020 20:24:18,491 INFO : 74% Done
23 Dec 2020 20:24:18,667 INFO : Inserting PP8000_CL51
23 Dec 2020 20:24:18,857 INFO : Inserting HSPC075_CL52
23 Dec 2020 20:24:18,866 INFO : 75% Done
23 Dec 2020 20:24:19,051 INFO : Inserting C13orf8_CL52
23 Dec 2020 20:24:19,062 INFO : 76% Done
23 Dec 2020 20:24:19,255 INFO : Inserting JUND_CL53
23 Dec 2020 20:24:19,265 INFO : 77% Done
23 Dec 2020 20:24:19,453 INFO : Inserting CLTA_CL53
23 Dec 2020 20:24:19,463 INFO : 78% Done
23 Dec 2020 20:24:19,665 INFO : Inserting KIAA0035_CL54
23 Dec 2020 20:24:19,947 INFO : Inserting AP1GBP1_CL55
23 Dec 2020 20:24:19,957 INFO : 79% Done
23 Dec 2020 20:24:20,148 INFO : Inserting CIN85_CL55
23 Dec 2020 20:24:20,159 INFO : 80% Done
23 Dec 2020 20:24:20,353 INFO : None of the 147648 TransitionChromInfos in the file were imported because they exceed the limit of 100000
23 Dec 2020 20:45:32,908 INFO : Updated 18432 PrecursorChromInfos with transition chromatogram index information
23 Dec 2020 20:45:32,956 INFO : Done parsing Skyline document.
23 Dec 2020 20:45:32,978 INFO : No group comparisons found.
23 Dec 2020 20:45:32,979 INFO : Calculating calibration curves
23 Dec 2020 20:45:33,054 INFO : 81% Done
23 Dec 2020 20:45:33,171 INFO : 82% Done
23 Dec 2020 20:45:33,327 INFO : 83% Done
23 Dec 2020 20:45:33,454 INFO : 84% Done
23 Dec 2020 20:45:33,600 INFO : 85% Done
23 Dec 2020 20:45:33,720 INFO : 86% Done
23 Dec 2020 20:45:33,833 INFO : 87% Done
23 Dec 2020 20:45:33,986 INFO : 88% Done
23 Dec 2020 20:45:34,144 INFO : 89% Done
23 Dec 2020 20:45:34,288 INFO : 90% Done
23 Dec 2020 20:45:34,404 INFO : 91% Done
23 Dec 2020 20:45:34,538 INFO : 92% Done
23 Dec 2020 20:45:34,703 INFO : 93% Done
23 Dec 2020 20:45:34,907 INFO : 94% Done
23 Dec 2020 20:45:35,151 INFO : 95% Done
23 Dec 2020 20:45:35,409 INFO : 96% Done
23 Dec 2020 20:45:35,594 INFO : 97% Done
23 Dec 2020 20:45:35,866 INFO : 98% Done
23 Dec 2020 20:45:36,012 INFO : Done calculating calibration curves.
23 Dec 2020 20:45:36,015 INFO : Creating and populating temp tables for Proportion values
23 Dec 2020 20:45:36,647 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Dec 2020 20:45:40,685 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Dec 2020 20:45:41,886 INFO : Cleaning up temp tables
23 Dec 2020 20:45:42,163 INFO : Completed import of Skyline document from LINCS_P100_PRM_Plate18_annotated_minimized_2020-01-08_17-11-19.sky.zip
23 Dec 2020 20:45:42,168 INFO : 100% Done
23 Dec 2020 20:45:42,214 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'