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Targeted MS Runs
LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
LINCS PCCSE GCP 2020
Document Summary
LINCS_GCP_Plate30_annotated_minimized_2018-05-07_16-32-39.sky.zip
115 MB
SkyP file (link only, 1KB)
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1 version
60 proteins
,
60 peptides
,
120 precursors
,
506 transitions
-
96 replicates
,
60 calibration curves
- Skyline-daily (64-bit) 4.1.1.18118
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H3K4me0 - BI10003
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T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10003
pr_gcp_histone_mark: H3K4me0
pr_gcp_modified_peptide_code: T[+56]K[+56]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10003
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
815.4501
T
K
QTAR
light
2+
408.7323
815.4501
3
19.0327
T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10003
pr_gcp_histone_mark: H3K4me0
pr_gcp_modified_peptide_code: T[+56]K[+56]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10003
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
815.4501
T
K
QTA
R
heavy
2+
413.7365
825.4584
3
19.0327
H3K4me1 - BI10004
Peptide
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T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10004
pr_gcp_histone_mark: H3K4me1
pr_gcp_modified_peptide_code: T[+56]K[+70]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10004
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
829.4658
T
K
QTAR
light
2+
415.7402
829.4658
3
19.4322
T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10004
pr_gcp_histone_mark: H3K4me1
pr_gcp_modified_peptide_code: T[+56]K[+70]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10004
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
829.4658
T
K
QTA
R
heavy
2+
420.7443
839.4740
3
19.4322
H3K4me2 - BI10005
Peptide
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T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10005
pr_gcp_histone_mark: H3K4me2
pr_gcp_modified_peptide_code: T[+56]K[+28]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10005
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
787.4552
T
K
QTAR
light
2+
394.7349
787.4552
6
18.2349
T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10005
pr_gcp_histone_mark: H3K4me2
pr_gcp_modified_peptide_code: T[+56]K[+28]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10005
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
787.4552
T
K
QTA
R
heavy
2+
399.7390
797.4635
6
18.2349
H3K4me3 - BI10006
Peptide
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T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10006
pr_gcp_histone_mark: H3K4me3
pr_gcp_modified_peptide_code: T[+56]K[+42]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10006
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
801.4709
T
K
QTAR
light
2+
401.7427
801.4709
10
18.6343
T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10006
pr_gcp_histone_mark: H3K4me3
pr_gcp_modified_peptide_code: T[+56]K[+42]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10006
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
801.4709
T
K
QTA
R
heavy
2+
406.7468
811.4791
10
18.6343
H3K4ac1 - BI10007
Peptide
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T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10007
pr_gcp_histone_mark: H3K4ac1
pr_gcp_modified_peptide_code: T[+56]K[+42]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10007
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
801.4345
T
K
QTAR
light
2+
401.7245
801.4345
3
18.6333
T
K
QTAR
pr_gcp_base_peptide: TKQTAR
pr_gcp_BI_number: BI10007
pr_gcp_histone_mark: H3K4ac1
pr_gcp_modified_peptide_code: T[+56]K[+42]QTAR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10007
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
801.4345
T
K
QTA
R
heavy
2+
406.7286
811.4427
3
18.6333
H3K9me0K14ac0 - BI10008
Peptide
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K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10008
pr_gcp_histone_mark: H3K9me0K14ac0
pr_gcp_modified_peptide_code: K[+112.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10008
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1068.5928
K
STGG
K
APR
light
2+
535.3037
1068.5928
4
26.2473
K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10008
pr_gcp_histone_mark: H3K9me0K14ac0
pr_gcp_modified_peptide_code: K[+112.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10008
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1068.5928
K
STGG
K
AP
R
heavy
2+
540.3078
1078.6010
4
26.2473
H3K9me1K14ac0 - BI10009
Peptide
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K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10009
pr_gcp_histone_mark: H3K9me1K14ac0
pr_gcp_modified_peptide_code: K[+126.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10009
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1082.6084
K
STGG
K
APR
light
2+
542.3115
1082.6084
4
26.6468
K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10009
pr_gcp_histone_mark: H3K9me1K14ac0
pr_gcp_modified_peptide_code: K[+126.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10009
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1082.6084
K
STGG
K
AP
R
heavy
2+
547.3156
1092.6167
4
26.6468
H3K9me2K14ac0 - BI10010
Peptide
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CE
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K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10010
pr_gcp_histone_mark: H3K9me2K14ac0
pr_gcp_modified_peptide_code: K[+84.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10010
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1040.5978
K
STGG
K
APR
light
2+
521.3062
1040.5978
4
25.4495
K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10010
pr_gcp_histone_mark: H3K9me2K14ac0
pr_gcp_modified_peptide_code: K[+84.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10010
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1040.5978
K
STGG
K
AP
R
heavy
2+
526.3103
1050.6061
4
25.4495
H3K9me3K14ac0 - BI10011
Peptide
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Rank
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Precursor
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CE
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K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10011
pr_gcp_histone_mark: H3K9me3K14ac0
pr_gcp_modified_peptide_code: K[+98.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10011
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1054.6135
K
STGG
K
APR
light
2+
528.3140
1054.6135
4
25.8489
K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10011
pr_gcp_histone_mark: H3K9me3K14ac0
pr_gcp_modified_peptide_code: K[+98.1]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10011
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1054.6135
K
STGG
K
AP
R
heavy
2+
533.3182
1064.6218
4
25.8489
H3K9ac1K14ac0 - BI10012
Peptide
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CE
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K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10012
pr_gcp_histone_mark: H3K9ac1K14ac0
pr_gcp_modified_peptide_code: K[+98]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10012
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1054.5771
K
STGG
K
APR
light
2+
528.2958
1054.5771
4
25.8479
K
STGG
K
APR
pr_gcp_base_peptide: KSTGGKAPR
pr_gcp_BI_number: BI10012
pr_gcp_histone_mark: H3K9ac1K14ac0
pr_gcp_modified_peptide_code: K[+98]STGGK[+56]APR
pr_gene_id: 8350
pr_gene_symbol: HIST1H3A
pr_id: BI10012
pr_probe_normalization_group: 1
pr_probe_suitability_manual: TRUE
pr_uniprot_id: P68431
0
1054.5771
K
STGG
K
AP
R
heavy
2+
533.3000
1064.5854
4
25.8479