12 Dec 2017 11:26:03,702 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
12 Dec 2017 11:26:03,706 INFO : Starting to import Skyline document from 20170215_Exp2B6.5_Chromatogram_2.5x_2017-12-12_11-26-00.sky.zip
12 Dec 2017 11:26:03,707 INFO : Expanding 20170215_Exp2B6.5_Chromatogram_2.5x.skyd
12 Dec 2017 11:26:03,712 INFO : Expanding 20170215_Exp2B6.5_Chromatogram_2.5x.sky.view
12 Dec 2017 11:26:03,712 INFO : Expanding 20170215_Exp2B6.5_Chromatogram_2.5x.sky
12 Dec 2017 11:26:03,719 WARN : The version of this Skyline document is 3.73. This is newer than the highest supported version 3.62
12 Dec 2017 11:26:03,893 INFO : Inserting sp|Q6GQT1|A2MG_MOUSE
12 Dec 2017 11:26:04,128 INFO : Inserting sp|Q9WTQ5|AKA12_MOUSE
12 Dec 2017 11:26:04,247 INFO : Inserting sp|Q923X1|AGRL4_MOUSE
12 Dec 2017 11:26:04,312 INFO : Inserting sp|P07356|ANXA2_MOUSE
12 Dec 2017 11:26:04,384 INFO : Inserting sp|Q9CPY7|AMPL_MOUSE
12 Dec 2017 11:26:04,510 INFO : Inserting sp|Q03157|APLP1_MOUSE
12 Dec 2017 11:26:04,594 INFO : Inserting sp|P82198|BGH3_MOUSE
12 Dec 2017 11:26:04,675 INFO : Inserting sp|Q9DCX2|ATP5H_MOUSE
12 Dec 2017 11:26:04,838 INFO : Inserting sp|P16015|CAH3_MOUSE
12 Dec 2017 11:26:04,919 INFO : Inserting sp|P18242|CATD_MOUSE
12 Dec 2017 11:26:04,994 INFO : Inserting sp|Q9JHH6|CBPB2_MOUSE
12 Dec 2017 11:26:05,054 INFO : Inserting sp|Q61490|CD166_MOUSE
12 Dec 2017 11:26:05,191 INFO : Inserting sp|P03953|CFAD_MOUSE
12 Dec 2017 11:26:05,280 INFO : Inserting sp|P12960|CNTN1_MOUSE
12 Dec 2017 11:26:05,329 INFO : Inserting sp|Q8CG14|CS1A_MOUSE
12 Dec 2017 11:26:05,410 INFO : Inserting sp|P56395|CYB5_MOUSE
12 Dec 2017 11:26:05,477 INFO : Inserting sp|P07141|CSF1_MOUSE
12 Dec 2017 11:26:05,543 INFO : Inserting sp|P21460|CYTC_MOUSE
12 Dec 2017 11:26:05,595 INFO : Inserting sp|P11404|FABPH_MOUSE
12 Dec 2017 11:26:05,663 INFO : Inserting sp|Q9QVP9|FAK2_MOUSE
12 Dec 2017 11:26:05,735 INFO : Inserting sp|Q05816|FABP5_MOUSE
12 Dec 2017 11:26:05,815 INFO : Inserting sp|Q71KU9|FGL1_MOUSE
12 Dec 2017 11:26:05,885 INFO : Inserting sp|Q9DCZ1|GMPR1_MOUSE
12 Dec 2017 11:26:05,978 INFO : Inserting sp|Q9D6R2|IDH3A_MOUSE
12 Dec 2017 11:26:06,058 INFO : Inserting sp|Q61316|HSP74_MOUSE
12 Dec 2017 11:26:06,126 INFO : Inserting sp|O88844|IDHC_MOUSE
12 Dec 2017 11:26:06,192 INFO : Inserting sp|P05017|IGF1_MOUSE
12 Dec 2017 11:26:06,272 INFO : Inserting sp|P01631|KV2A7_MOUSE
12 Dec 2017 11:26:06,370 INFO : Inserting sp|Q60675|LAMA2_MOUSE
12 Dec 2017 11:26:06,457 INFO : Inserting sp|P16125|LDHB_MOUSE
12 Dec 2017 11:26:06,539 INFO : Inserting sp|P98064|MASP1_MOUSE
12 Dec 2017 11:26:06,641 INFO : Inserting sp|P06801|MAOX_MOUSE
12 Dec 2017 11:26:06,699 INFO : Inserting sp|P08249|MDHM_MOUSE
12 Dec 2017 11:26:06,751 INFO : Inserting sp|Q8VI63|MOB2_MOUSE
12 Dec 2017 11:26:06,812 INFO : Inserting sp|Q5FW60|MUP20_MOUSE
12 Dec 2017 11:26:06,904 INFO : Inserting sp|Q9JKF6|NECT1_MOUSE
12 Dec 2017 11:26:06,950 INFO : Inserting sp|P70195|PSB7_MOUSE
12 Dec 2017 11:26:07,015 INFO : Inserting sp|P54726|RD23A_MOUSE
12 Dec 2017 11:26:07,063 INFO : Inserting sp|Q62009|POSTN_MOUSE
12 Dec 2017 11:26:07,139 INFO : Inserting sp|P99027|RLA2_MOUSE
12 Dec 2017 11:26:07,193 INFO : Inserting sp|P12246|SAMP_MOUSE
12 Dec 2017 11:26:07,264 INFO : Inserting sp|Q5I2A0|SPA3G_MOUSE
12 Dec 2017 11:26:07,352 INFO : Inserting sp|O70492|SNX3_MOUSE
12 Dec 2017 11:26:07,424 INFO : Inserting sp|P84104|SRSF3_MOUSE
12 Dec 2017 11:26:07,539 INFO : Inserting sp|P26039|TLN1_MOUSE
12 Dec 2017 11:26:07,629 INFO : Inserting sp|P35917|VGFR3_MOUSE
12 Dec 2017 11:26:07,719 INFO : Inserting sp|O88342|WDR1_MOUSE
12 Dec 2017 11:26:07,819 INFO : Inserting sp|Q64727|VINC_MOUSE
12 Dec 2017 11:26:07,875 INFO : Inserting sp|P16882-2|GHR_MOUSE
12 Dec 2017 11:26:40,183 INFO : Completed import of Skyline document from 20170215_Exp2B6.5_Chromatogram_2.5x_2017-12-12_11-26-00.sky.zip
12 Dec 2017 11:27:11,359 INFO : Failed to complete task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'
12 Dec 2017 11:27:11,361 ERROR: Uncaught exception in PipelineJob: (DONE) Skyline document import - 20170215_Exp2B6.5_Chromatogram_2.5x_2017-12-12_11-26-00.sky.zip
java.sql.SQLException: Optimistic concurrency exception: Row deleted
at org.labkey.api.exceptions.OptimisticConflictException.<init>(OptimisticConflictException.java:30)
at org.labkey.api.exceptions.OptimisticConflictException.create(OptimisticConflictException.java:44)
at org.labkey.api.data.Table.update(Table.java:934)
at org.labkey.api.data.Table.update(Table.java:795)
at org.labkey.experiment.api.ExpIdentifiableBaseImpl.save(ExpIdentifiableBaseImpl.java:97)
at org.labkey.experiment.api.ExpRunImpl.save(ExpRunImpl.java:223)
at org.labkey.targetedms.TargetedMSManager.wrapRun(TargetedMSManager.java:621)
at org.labkey.targetedms.TargetedMSManager.ensureWrapped(TargetedMSManager.java:561)
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:63)
at org.labkey.api.pipeline.PipelineJob.runActiveTask(PipelineJob.java:714)
at org.labkey.api.pipeline.PipelineJob.run(PipelineJob.java:945)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)