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Validating data for experiment Id: 1976, validation Id: 1336

MacCoss - DIA to SRM Assays

Job Status

Created: 2025-01-10 11:16:01
Modified: 2025-01-10 11:16:01
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1976, validation Id: 1336
File Path: /data/labkey/files/Panorama Public/2025/MacCoss - DIA to SRM Assays/@files/Experiment_Validation_2067_2025-01-10_11-16.log
Files: Experiment_Validation_2067_2025-01-10_11-16.log
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Log File


10 Jan 2025 11:16:01,784 INFO : Validating data for a ProteomeXchange submission.
10 Jan 2025 11:16:01,785 INFO : =======================================
10 Jan 2025 11:16:01,811 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
10 Jan 2025 11:16:01,812 INFO : Validating data for experiment Id: 1976, validation Id: 1336
10 Jan 2025 11:16:01,827 INFO : Validating data for 5 Skyline documents in 1 folders
10 Jan 2025 11:16:01,837 INFO : Sample file validation for Skyline document: DIA_targets_AD_2025-01-03_15-13-47.sky.zip
10 Jan 2025 11:16:01,837 INFO :   Found all sample files.
10 Jan 2025 11:16:01,842 INFO : Sample file validation for Skyline document: pain_target_SRM_2025-01-03_16-06-30.sky.zip
10 Jan 2025 11:16:01,842 INFO :   Found all sample files.
10 Jan 2025 11:16:01,850 INFO : Sample file validation for Skyline document: pain_target_peptides_DIA_2025-01-03_16-09-15.sky.zip
10 Jan 2025 11:16:01,850 INFO :   Found all sample files.
10 Jan 2025 11:16:01,859 INFO : Sample file validation for Skyline document: 20180527_SRM_results_2025-01-03_16-10-45.sky.zip
10 Jan 2025 11:16:01,859 INFO :   Found all sample files.
10 Jan 2025 11:16:01,866 INFO : Sample file validation for Skyline document: DIA_CSF_CombinedLibs_quant_2025-01-08_14-02-02.sky.zip
10 Jan 2025 11:16:01,866 INFO :   Found all sample files.
10 Jan 2025 11:16:01,938 INFO : Modifications validation:
10 Jan 2025 11:16:01,938 INFO : VALID MODIFICATIONS:
10 Jan 2025 11:16:01,938 INFO : 10012: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
10 Jan 2025 11:16:01,938 INFO :     pain_target_peptides_DIA_2025-01-03_16-09-15.sky.zip
10 Jan 2025 11:16:01,938 INFO :     pain_target_SRM_2025-01-03_16-06-30.sky.zip
10 Jan 2025 11:16:01,938 INFO :     DIA_targets_AD_2025-01-03_15-13-47.sky.zip
10 Jan 2025 11:16:01,938 INFO :     DIA_CSF_CombinedLibs_quant_2025-01-08_14-02-02.sky.zip
10 Jan 2025 11:16:01,938 INFO :     20180527_SRM_results_2025-01-03_16-10-45.sky.zip
10 Jan 2025 11:16:01,938 INFO : 10013: Label:13C(6)15N(2) (C-term K): 
10 Jan 2025 11:16:01,938 INFO :     pain_target_peptides_DIA_2025-01-03_16-09-15.sky.zip
10 Jan 2025 11:16:01,938 INFO :     pain_target_SRM_2025-01-03_16-06-30.sky.zip
10 Jan 2025 11:16:01,938 INFO :     20180527_SRM_results_2025-01-03_16-10-45.sky.zip
10 Jan 2025 11:16:01,938 INFO : 10014: Label:13C(6)15N(4) (C-term R): 
10 Jan 2025 11:16:01,938 INFO :     pain_target_peptides_DIA_2025-01-03_16-09-15.sky.zip
10 Jan 2025 11:16:01,938 INFO :     pain_target_SRM_2025-01-03_16-06-30.sky.zip
10 Jan 2025 11:16:01,938 INFO :     20180527_SRM_results_2025-01-03_16-10-45.sky.zip
10 Jan 2025 11:16:01,938 INFO : 10015: Label:15N: 
10 Jan 2025 11:16:01,938 INFO :     pain_target_peptides_DIA_2025-01-03_16-09-15.sky.zip
10 Jan 2025 11:16:01,938 INFO :     pain_target_SRM_2025-01-03_16-06-30.sky.zip
10 Jan 2025 11:16:01,938 INFO :     DIA_targets_AD_2025-01-03_15-13-47.sky.zip
10 Jan 2025 11:16:01,938 INFO :     20180527_SRM_results_2025-01-03_16-10-45.sky.zip
10 Jan 2025 11:16:01,938 INFO : INVALID MODIFICATIONS (No Unimod ID):
10 Jan 2025 11:16:01,939 INFO : Validating spectral library: B_ChromLib_quant.elib
10 Jan 2025 11:16:01,957 INFO : 'CSF_B' (B_ChromLib_quant.elib) library in 3 Skyline documents was built with 6 raw files; 0 peptide Id files. Status: VALID
10 Jan 2025 11:16:01,957 INFO : Validating spectral library: ABC_ChromLib_quant.elib
10 Jan 2025 11:16:01,980 INFO : 'DTS_DIALib_combined' (ABC_ChromLib_quant.elib) library in 1 Skyline documents was built with 18 raw files; 0 peptide Id files. Status: VALID
10 Jan 2025 11:16:01,981 INFO : Validating spectral library: B_chromLib.elib
10 Jan 2025 11:16:01,988 INFO : 'CSF_B' (B_chromLib.elib) library in 1 Skyline documents was built with 6 raw files; 0 peptide Id files. Status: VALID
10 Jan 2025 11:16:01,988 INFO : Spectral library validation complete.
10 Jan 2025 11:16:01,989 INFO : Data validation is complete. Status is Complete
10 Jan 2025 11:16:01,989 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'