17 Dec 2024 09:35:09,896 INFO : Copying experiment "A polyketide-based biosynthetic platform for diols, amino alcohols and hydroxyacids" from folder /JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction to /Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction
17 Dec 2024 09:35:09,896 INFO : =======================================
17 Dec 2024 09:35:09,916 DEBUG: Resetting Job ID: 61c84a4a-9eca-103d-b1ba-8d1d6db2ce32
17 Dec 2024 09:35:09,941 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
17 Dec 2024 09:35:09,941 INFO :
17 Dec 2024 09:35:09,941 INFO : Exporting experiment.
17 Dec 2024 09:35:10,531 INFO : Exporting files metadata.
17 Dec 2024 09:35:10,531 DEBUG: [/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction] Writing files metadata to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/export
17 Dec 2024 09:35:10,548 INFO :
17 Dec 2024 09:35:10,548 INFO : Experiment export completed successfully.
17 Dec 2024 09:35:10,548 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
17 Dec 2024 09:35:10,571 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
17 Dec 2024 09:35:10,571 INFO :
17 Dec 2024 09:35:10,571 INFO : Importing experiment.
17 Dec 2024 09:35:10,594 DEBUG: [/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction] Importing folder properties from: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/export
17 Dec 2024 09:35:10,595 INFO : Loading folder properties (folder type, settings and active modules)
17 Dec 2024 09:35:10,596 DEBUG: [/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction] Folder type: Targeted MS
17 Dec 2024 09:35:10,596 DEBUG: [/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction] Active modules: Issues, PanoramaPublic, Experiment, Query, FileContent, Search, Pipeline, Announcements, Assay, Protein, API, Core, Wiki, TargetedMS
17 Dec 2024 09:35:10,629 INFO : Done importing folder properties (folder type, settings and active modules)
17 Dec 2024 09:35:10,630 INFO : Loading container specific module properties
17 Dec 2024 09:35:10,635 INFO : Done importing container specific module properties
17 Dec 2024 09:35:10,637 INFO : Loading queries
17 Dec 2024 09:35:10,640 INFO : 1 query imported
17 Dec 2024 09:35:10,640 INFO : Done importing queries
17 Dec 2024 09:35:10,641 INFO : Loading etl definitions
17 Dec 2024 09:35:10,642 INFO : Loading wikis
17 Dec 2024 09:35:10,644 INFO : 0 wikis imported
17 Dec 2024 09:35:10,644 INFO : Done importing wikis
17 Dec 2024 09:35:10,645 INFO : Starting Data Class Importer
17 Dec 2024 09:35:10,646 INFO : No types XAR file to process.
17 Dec 2024 09:35:10,646 INFO : Finished Data Class Importer
17 Dec 2024 09:35:10,646 INFO : Starting to copy files to @files
17 Dec 2024 09:35:10,646 INFO : Copied 0 files to @files
17 Dec 2024 09:35:10,647 INFO : Starting to copy files to @assayfiles
17 Dec 2024 09:35:10,647 INFO : Copied 0 files to @assayfiles
17 Dec 2024 09:35:10,647 INFO : Ensuring exp.data rows exist for imported files
17 Dec 2024 09:35:10,699 INFO : Starting Sample Type Importer
17 Dec 2024 09:35:10,700 INFO : No types XAR file to process.
17 Dec 2024 09:35:10,700 INFO : Finished Sample Type Importer
17 Dec 2024 09:35:10,700 INFO : Loading xar
17 Dec 2024 09:35:10,780 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip'
17 Dec 2024 09:35:10,781 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip.Core'
17 Dec 2024 09:35:10,783 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip.Output'
17 Dec 2024 09:35:10,783 DEBUG: Protocol import complete
17 Dec 2024 09:35:10,784 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-14352:Polyketide+synthase-based+biosynthesis+of+diols+and+aldehyde+derivatives+via+terminal+thioreduction'
17 Dec 2024 09:35:10,784 DEBUG: Experiment/Run group import complete
17 Dec 2024 09:35:10,789 DEBUG: Protocol action set import complete
17 Dec 2024 09:35:10,795 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip'
17 Dec 2024 09:35:10,802 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14352:d4631af6-9e0b-103d-b7af-8d1d6db23074'
17 Dec 2024 09:35:10,805 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14352:d4631abc-9e0b-103d-b7af-8d1d6db23074'
17 Dec 2024 09:35:10,805 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip.Core'
17 Dec 2024 09:35:10,807 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14352:TargetedMS.ImportSkyZip.Output'
17 Dec 2024 09:35:10,807 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14352:d4631bdb-9e0b-103d-b7af-8d1d6db23074'
17 Dec 2024 09:35:10,812 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/JBEI%20-%20Dan%20et%20al_Polyketide%20synthase-based%20biosynthesis%20of%20diols%20and%20aldehyde%20derivatives%20via%20terminal%20thioreduction/@files/export/xar/experiments_and_runs.xar.exploded/Run238067/PimS0PKS%20Ppant%20ejection%20assay_Report_2024-12-16_10-43-24/PimS0PKS%20Ppant%20ejection%20assay_Report.skyd into the system
17 Dec 2024 09:35:10,812 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/JBEI%20-%20Dan%20et%20al_Polyketide%20synthase-based%20biosynthesis%20of%20diols%20and%20aldehyde%20derivatives%20via%20terminal%20thioreduction/@files/export/xar/experiments_and_runs.xar.exploded/Run238067/PimS0PKS%20Ppant%20ejection%20assay_Report_2024-12-16_10-43-24/PimS0PKS%20Ppant%20ejection%20assay_Report.skyd into the system
17 Dec 2024 09:35:10,812 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/JBEI%20-%20Dan%20et%20al_Polyketide%20synthase-based%20biosynthesis%20of%20diols%20and%20aldehyde%20derivatives%20via%20terminal%20thioreduction/@files/export/xar/experiments_and_runs.xar.exploded/Run238067/PimS0PKS%20Ppant%20ejection%20assay_Report_2024-12-16_10-43-24.sky.zip into the system
17 Dec 2024 09:35:10,813 INFO : Starting import from PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:10,815 INFO : Starting to import Skyline document from PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:10,816 INFO : Expanding PimS0PKS Ppant ejection assay_Report.skyd
17 Dec 2024 09:35:10,849 INFO : Expanding PimS0PKS Ppant ejection assay_Report.sky.view
17 Dec 2024 09:35:10,849 INFO : Expanding PimS0PKS Ppant ejection assay_Report.sky
17 Dec 2024 09:35:10,851 INFO : Expanding PimS0PKS Ppant ejection assay_Report.skyl
17 Dec 2024 09:35:10,852 INFO : Reading Skyline file, PimS0PKS Ppant ejection assay_Report.sky, to determine if the TransitionChromInfos in the document should be stored...
17 Dec 2024 09:35:10,854 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
17 Dec 2024 09:35:10,856 INFO : 6% Done
17 Dec 2024 09:35:10,889 DEBUG: Starting to load chromatogram headers
17 Dec 2024 09:35:10,890 DEBUG: Done loading chromatogram headers
17 Dec 2024 09:35:11,035 INFO : Inserting PimS0_N
17 Dec 2024 09:35:11,041 INFO : 22% Done
17 Dec 2024 09:35:11,061 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,062 INFO : Inserting PimS0_C
17 Dec 2024 09:35:11,067 INFO : 37% Done
17 Dec 2024 09:35:11,085 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,085 INFO : Inserting PimS0_ACP1-Apo
17 Dec 2024 09:35:11,090 INFO : 54% Done
17 Dec 2024 09:35:11,109 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,109 INFO : Inserting PimS0_ACP2-Apo
17 Dec 2024 09:35:11,114 INFO : 70% Done
17 Dec 2024 09:35:11,132 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,132 INFO : Inserting PimS0_ACP1-Holo (IAM)
17 Dec 2024 09:35:11,154 INFO : 74% Done
17 Dec 2024 09:35:11,165 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,165 INFO : Inserting PimS0_ACP2-Holo (IAM)
17 Dec 2024 09:35:11,168 INFO : 79% Done
17 Dec 2024 09:35:11,175 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,175 INFO : Inserting PimS0_Acetyl_ACP1
17 Dec 2024 09:35:11,177 INFO : 84% Done
17 Dec 2024 09:35:11,185 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,185 INFO : Inserting PimS0_Acetyl_ACP2
17 Dec 2024 09:35:11,187 INFO : 88% Done
17 Dec 2024 09:35:11,196 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,198 INFO : 90% Done
17 Dec 2024 09:35:11,198 INFO : Inserting PimS0_Malonyl_ACP1
17 Dec 2024 09:35:11,200 INFO : 94% Done
17 Dec 2024 09:35:11,209 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,209 INFO : Inserting PimS0_Malonyl_ACP2
17 Dec 2024 09:35:11,211 INFO : 98% Done
17 Dec 2024 09:35:11,220 DEBUG: Total peptides inserted: 1
17 Dec 2024 09:35:11,220 INFO : Done parsing Skyline document.
17 Dec 2024 09:35:11,247 INFO : Creating and populating temp tables for Proportion values
17 Dec 2024 09:35:11,252 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
17 Dec 2024 09:35:11,267 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
17 Dec 2024 09:35:11,272 INFO : Cleaning up temp tables
17 Dec 2024 09:35:11,509 INFO : Completed import of Skyline document from PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:11,511 INFO : 100% Done
17 Dec 2024 09:35:11,515 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/JBEI%20-%20Dan%20et%20al_Polyketide%20synthase-based%20biosynthesis%20of%20diols%20and%20aldehyde%20derivatives%20via%20terminal%20thioreduction/@files/export/xar/experiments_and_runs.xar.exploded/Run238067/PimS0PKS%20Ppant%20ejection%20assay_Report_2024-12-16_10-43-24.sky.zip into the system
17 Dec 2024 09:35:11,763 INFO : Done importing xar
17 Dec 2024 09:35:11,764 INFO : Loading pages and webpart properties
17 Dec 2024 09:35:11,808 INFO : Done importing 3 page(s) with 5 webpart(s)
17 Dec 2024 09:35:11,808 INFO : Loading File Browser config
17 Dec 2024 09:35:11,808 INFO : Done importing File Browser config
17 Dec 2024 09:35:11,809 INFO : Starting Sample Status Data import
17 Dec 2024 09:35:11,809 INFO : No sample types XAR file to process.
17 Dec 2024 09:35:11,809 INFO : Finished importing Sample Status Data
17 Dec 2024 09:35:11,813 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
17 Dec 2024 09:35:11,817 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
17 Dec 2024 09:35:11,817 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
17 Dec 2024 09:35:11,817 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
17 Dec 2024 09:35:11,817 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
17 Dec 2024 09:35:11,818 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
17 Dec 2024 09:35:11,820 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
17 Dec 2024 09:35:11,825 INFO : Moving files to folder /Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction and creating symlinks
17 Dec 2024 09:35:11,826 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip
17 Dec 2024 09:35:11,827 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip
17 Dec 2024 09:35:11,834 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip
17 Dec 2024 09:35:11,835 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41.sky.zip
17 Dec 2024 09:35:11,835 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24
17 Dec 2024 09:35:11,836 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky.view to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky.view
17 Dec 2024 09:35:11,837 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky.view targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky.view
17 Dec 2024 09:35:11,838 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky
17 Dec 2024 09:35:11,839 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.sky
17 Dec 2024 09:35:11,840 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyd to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyd
17 Dec 2024 09:35:11,840 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyd targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyd
17 Dec 2024 09:35:11,841 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyl to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyl
17 Dec 2024 09:35:11,842 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyl targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyl
17 Dec 2024 09:35:11,843 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles
17 Dec 2024 09:35:11,843 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_1hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_1hr.d.zip
17 Dec 2024 09:35:11,844 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_1hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_1hr.d.zip
17 Dec 2024 09:35:11,845 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,845 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,849 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,850 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,851 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_1hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_1hr.d.zip
17 Dec 2024 09:35:11,852 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_1hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_1hr.d.zip
17 Dec 2024 09:35:11,852 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_24hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_24hr.d.zip
17 Dec 2024 09:35:11,853 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_24hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_24hr.d.zip
17 Dec 2024 09:35:11,854 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,854 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,858 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,859 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_4hr-IAA.d.zip
17 Dec 2024 09:35:11,860 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_4hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_4hr.d.zip
17 Dec 2024 09:35:11,860 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_4hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_4hr.d.zip
17 Dec 2024 09:35:11,861 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr2-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr2-IAA.d.zip
17 Dec 2024 09:35:11,862 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr2-IAA.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr2-IAA.d.zip
17 Dec 2024 09:35:11,863 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_10min-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_10min-IAA.d.zip
17 Dec 2024 09:35:11,864 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_10min-IAA.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_10min-IAA.d.zip
17 Dec 2024 09:35:11,864 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,865 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,868 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,870 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,870 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_24hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_24hr.d.zip
17 Dec 2024 09:35:11,871 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_24hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_24hr.d.zip
17 Dec 2024 09:35:11,871 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,872 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,876 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,877 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_1hr-IAA.d.zip
17 Dec 2024 09:35:11,877 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_24hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_24hr.d.zip
17 Dec 2024 09:35:11,878 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_24hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_24hr.d.zip
17 Dec 2024 09:35:11,879 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_4hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_4hr.d.zip
17 Dec 2024 09:35:11,880 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_4hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_4hr.d.zip
17 Dec 2024 09:35:11,881 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_0hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_0hr.d.zip
17 Dec 2024 09:35:11,882 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_0hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_CoA_0hr.d.zip
17 Dec 2024 09:35:11,882 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_0hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_0hr.d.zip
17 Dec 2024 09:35:11,883 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_0hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_0hr.d.zip
17 Dec 2024 09:35:11,884 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr1-IAA.d.zip
17 Dec 2024 09:35:11,884 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_Ctr1-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr1-IAA.d.zip
17 Dec 2024 09:35:11,888 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr1-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_Ctr1-IAA.d.zip
17 Dec 2024 09:35:11,889 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_Ctr1-IAA.d.zip
17 Dec 2024 09:35:11,890 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_MalonylCoA_10min-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_MalonylCoA_10min-IAA.d.zip
17 Dec 2024 09:35:11,891 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_MalonylCoA_10min-IAA.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_MalonylCoA_10min-IAA.d.zip
17 Dec 2024 09:35:11,891 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,892 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,896 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,897 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_AcetylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,897 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_1hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_1hr.d.zip
17 Dec 2024 09:35:11,898 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_1hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_malonate_1hr.d.zip
17 Dec 2024 09:35:11,899 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_4hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_4hr.d.zip
17 Dec 2024 09:35:11,900 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_4hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_4hr.d.zip
17 Dec 2024 09:35:11,900 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,901 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,905 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,906 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/RawFiles/PimS0_malonylCoA_24hr-IAA.d.zip
17 Dec 2024 09:35:11,906 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_0hr.d.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_0hr.d.zip
17 Dec 2024 09:35:11,907 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_0hr.d.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/RawFiles/PimS0_WT_acetate_0hr.d.zip
17 Dec 2024 09:35:11,908 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41
17 Dec 2024 09:35:11,908 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd
17 Dec 2024 09:35:11,909 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd
17 Dec 2024 09:35:11,913 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd
17 Dec 2024 09:35:11,913 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyd
17 Dec 2024 09:35:11,913 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view
17 Dec 2024 09:35:11,914 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view
17 Dec 2024 09:35:11,918 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view
17 Dec 2024 09:35:11,919 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky.view
17 Dec 2024 09:35:11,919 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl
17 Dec 2024 09:35:11,919 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl
17 Dec 2024 09:35:11,923 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl
17 Dec 2024 09:35:11,924 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.skyl
17 Dec 2024 09:35:11,924 DEBUG: Source file is a symlink: /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky
17 Dec 2024 09:35:11,925 DEBUG: Moved symlink target /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky
17 Dec 2024 09:35:11,929 INFO : Target for symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky updated to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky
17 Dec 2024 09:35:11,930 DEBUG: Replaced old target with symlink: /data/labkey/files/Panorama Public/2023/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction V.1/@files/PimS0 substrates loading assay_2023-11-16_16-45-41/PimS0 substrates loading assay.sky
17 Dec 2024 09:35:11,930 DEBUG: Moved file /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip to /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:11,931 DEBUG: Created symlink /data/labkey/files/JBEI/On-going work/Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip targeting /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:11,931 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/assaydata
17 Dec 2024 09:35:11,931 INFO : Aligning data files urls in folder: /Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction
17 Dec 2024 09:35:11,933 DEBUG: Setting filePathRoot on copied run: PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip to: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files
17 Dec 2024 09:35:11,936 DEBUG: Setting dataFileUri on copied data: PimS0PKS Ppant ejection assay_Report.skyd to: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24/PimS0PKS Ppant ejection assay_Report.skyd
17 Dec 2024 09:35:11,937 DEBUG: Setting dataFileUri on copied data: PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip to: /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/PimS0PKS Ppant ejection assay_Report_2024-12-16_10-43-24.sky.zip
17 Dec 2024 09:35:11,938 INFO : Importing files metadata.
17 Dec 2024 09:35:11,938 DEBUG: [/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction] Reading files metadata from /data/labkey/files/Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction/@files/export
17 Dec 2024 09:35:11,939 INFO :
17 Dec 2024 09:35:11,939 INFO : Experiment import completed successfully.
17 Dec 2024 09:35:11,939 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
17 Dec 2024 09:35:11,964 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
17 Dec 2024 09:35:11,964 INFO :
17 Dec 2024 09:35:11,964 INFO : Checking for library folders.
17 Dec 2024 09:35:11,966 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
17 Dec 2024 09:35:11,986 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
17 Dec 2024 09:35:11,986 INFO :
17 Dec 2024 09:35:11,986 INFO : Finishing up experiment copy.
17 Dec 2024 09:35:11,990 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2024/JBEI - Dan et al_Polyketide synthase-based biosynthesis of diols and aldehyde derivatives via terminal thioreduction
17 Dec 2024 09:35:11,991 INFO : Setting version on new experiment to 2
17 Dec 2024 09:35:11,992 INFO : Updating permanent link to point to the new copy of the data.
17 Dec 2024 09:35:11,996 INFO : Removing copy permissions given to Panorama Public
17 Dec 2024 09:35:11,999 INFO : Adding read permissions to all users that are folder admins in the source folder.
17 Dec 2024 09:35:11,999 INFO : Adding read permissions to all users that had read access to previous copy.
17 Dec 2024 09:35:12,000 INFO : Assigning ReaderRole to panorama+reviewer229@proteinms.net
17 Dec 2024 09:35:12,000 INFO : Assigning ReaderRole to cjpetzold@lbl.gov
17 Dec 2024 09:35:12,000 INFO : Assigning PanoramaPublicSubmitterRole to cjpetzold@lbl.gov
17 Dec 2024 09:35:12,006 INFO : User cjpetzold@lbl.gov is already a member of group Panorama Public Submitters
17 Dec 2024 09:35:12,006 INFO : Updating the 'Raw Data' tab configuration
17 Dec 2024 09:35:12,007 INFO : Hiding the Data Pipeline tab.
17 Dec 2024 09:35:12,010 INFO : Creating a new versioned URL for the previous copy of the data: pks_diol_production_Dan_et_al_v1
17 Dec 2024 09:35:12,047 INFO : Setting the permanent link on the previous copy to pks_diol_production_Dan_et_al_v1
17 Dec 2024 09:35:12,049 INFO : Updating Submission. Setting copiedExperimentId to 1962
17 Dec 2024 09:35:13,583 INFO : Copying ProteomeXchange ID from the previous copy of the data.
17 Dec 2024 09:35:13,583 INFO : Copying DOI from the previous copy of the data.
17 Dec 2024 09:35:13,583 INFO : Removing DOI from the previous copy
17 Dec 2024 09:35:13,614 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'