14 Nov 2024 16:06:10,615 DEBUG: Resetting Job ID: 9c193ff7-8512-103d-a53a-8d1d6db29c7c
14 Nov 2024 16:06:10,640 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
14 Nov 2024 16:06:10,641 INFO : Starting to import Skyline document from EVpep_4qisearch_allpep_2024-11-14_16-05-54.sky.zip
14 Nov 2024 16:06:10,641 INFO : Expanding EVpep_4qi.elib
14 Nov 2024 16:06:10,651 INFO : Expanding EVpep_4qisearch_allpep.skyd
14 Nov 2024 16:06:10,722 INFO : Expanding EVpep_4qisearch_allpep.sky.view
14 Nov 2024 16:06:10,722 INFO : Expanding EVpep_4qisearch_allpep.sky
14 Nov 2024 16:06:10,729 INFO : Expanding EVpep_4qisearch_allpep.skyl
14 Nov 2024 16:06:10,731 INFO : Reading Skyline file, EVpep_4qisearch_allpep.sky, to determine if the TransitionChromInfos in the document should be stored...
14 Nov 2024 16:06:10,739 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
14 Nov 2024 16:06:10,739 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
14 Nov 2024 16:06:10,752 DEBUG: Starting to load chromatogram headers
14 Nov 2024 16:06:10,754 DEBUG: Done loading chromatogram headers
14 Nov 2024 16:06:11,052 INFO : 1% Done
14 Nov 2024 16:06:11,052 INFO : Inserting sp|P59190|RAB15_HUMAN
14 Nov 2024 16:06:11,069 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,070 INFO : Inserting sp|Q92928|RAB1C_HUMAN / sp|Q9H0U4|RAB1B_HUMAN / sp|P62820|RAB1A_HUMAN / sp|Q92930|RAB8B_HUMAN / sp|P61006|RAB8A_HUMAN
14 Nov 2024 16:06:11,084 INFO : 2% Done
14 Nov 2024 16:06:11,091 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,091 INFO : Inserting sp|Q8IYT4|KATL2_HUMAN
14 Nov 2024 16:06:11,095 INFO : 3% Done
14 Nov 2024 16:06:11,098 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,098 INFO : Inserting sp|Q9NY65|TBA8_HUMAN
14 Nov 2024 16:06:11,106 INFO : 4% Done
14 Nov 2024 16:06:11,109 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,109 INFO : Inserting sp|P02679|FIBG_HUMAN
14 Nov 2024 16:06:11,115 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,115 INFO : Inserting sp|P20338|RAB4A_HUMAN / sp|Q86YS6|RAB43_HUMAN / sp|Q6IQ22|RAB12_HUMAN / sp|Q96AX2|RAB37_HUMAN / sp|P61106|RAB14_HUMAN / sp|P20337|RAB3B_HUMAN / sp|O95716|RAB3D_HUMAN / sp|Q15771|RAB30_HUMAN / sp|Q96E17|RAB3C_HUMAN / sp|Q96DA2|RB39B_HUMAN / sp|P61018|RAB4B_HUMAN / sp|P20336|RAB3A_HUMAN
14 Nov 2024 16:06:11,143 INFO : 5% Done
14 Nov 2024 16:06:11,145 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,146 INFO : Inserting sp|P05023|AT1A1_HUMAN / sp|P50993|AT1A2_HUMAN / sp|Q13733|AT1A4_HUMAN
14 Nov 2024 16:06:11,153 INFO : 6% Done
14 Nov 2024 16:06:11,157 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,157 INFO : Inserting sp|Q8NHP1|ARK74_HUMAN
14 Nov 2024 16:06:11,166 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,166 INFO : Inserting sp|P17081|RHOQ_HUMAN / sp|Q9H4E5|RHOJ_HUMAN / sp|P84095|RHOG_HUMAN / sp|P60953|CDC42_HUMAN
14 Nov 2024 16:06:11,177 INFO : 7% Done
14 Nov 2024 16:06:11,180 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,180 INFO : Inserting sp|P68366|TBA4A_HUMAN / sp|Q6PEY2|TBA3E_HUMAN / sp|P0DPH7|TBA3C_HUMAN / sp|P68363|TBA1B_HUMAN / sp|Q71U36|TBA1A_HUMAN / sp|P0DPH8|TBA3D_HUMAN
14 Nov 2024 16:06:11,195 INFO : 8% Done
14 Nov 2024 16:06:11,201 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,201 INFO : Inserting sp|P04003|C4BPA_HUMAN
14 Nov 2024 16:06:11,205 INFO : 9% Done
14 Nov 2024 16:06:11,217 INFO : 10% Done
14 Nov 2024 16:06:11,224 DEBUG: Total peptides inserted: 5
14 Nov 2024 16:06:11,225 INFO : Inserting sp|P62736|ACTA_HUMAN / sp|P68133|ACTS_HUMAN / sp|P63267|ACTH_HUMAN / sp|P68032|ACTC_HUMAN
14 Nov 2024 16:06:11,235 INFO : 11% Done
14 Nov 2024 16:06:11,239 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,239 INFO : Inserting sp|Q14520|HABP2_HUMAN
14 Nov 2024 16:06:11,245 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,247 INFO : 12% Done
14 Nov 2024 16:06:11,247 INFO : Inserting sp|Q6S8J3|POTEE_HUMAN / sp|P63261|ACTG_HUMAN / sp|P60709|ACTB_HUMAN
14 Nov 2024 16:06:11,258 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,258 INFO : Inserting sp|P37802|TAGL2_HUMAN
14 Nov 2024 16:06:11,265 INFO : 13% Done
14 Nov 2024 16:06:11,273 INFO : 14% Done
14 Nov 2024 16:06:11,276 DEBUG: Total peptides inserted: 4
14 Nov 2024 16:06:11,277 INFO : Inserting sp|P63104|1433Z_HUMAN
14 Nov 2024 16:06:11,288 INFO : 15% Done
14 Nov 2024 16:06:11,296 INFO : 16% Done
14 Nov 2024 16:06:11,304 INFO : 17% Done
14 Nov 2024 16:06:11,311 DEBUG: Total peptides inserted: 8
14 Nov 2024 16:06:11,311 INFO : Inserting sp|P55072|TERA_HUMAN
14 Nov 2024 16:06:11,318 INFO : 18% Done
14 Nov 2024 16:06:11,326 INFO : 19% Done
14 Nov 2024 16:06:11,337 INFO : 20% Done
14 Nov 2024 16:06:11,344 INFO : 21% Done
14 Nov 2024 16:06:11,351 INFO : 22% Done
14 Nov 2024 16:06:11,362 INFO : 23% Done
14 Nov 2024 16:06:11,369 INFO : 24% Done
14 Nov 2024 16:06:11,379 INFO : 25% Done
14 Nov 2024 16:06:11,396 INFO : 26% Done
14 Nov 2024 16:06:11,404 INFO : 27% Done
14 Nov 2024 16:06:11,406 DEBUG: Total peptides inserted: 26
14 Nov 2024 16:06:11,407 INFO : Inserting sp|P27797|CALR_HUMAN
14 Nov 2024 16:06:11,414 INFO : 28% Done
14 Nov 2024 16:06:11,423 DEBUG: Total peptides inserted: 4
14 Nov 2024 16:06:11,423 INFO : Inserting tr|A0A1B0GUL7|A0A1B0GUL7_HUMAN
14 Nov 2024 16:06:11,426 INFO : 29% Done
14 Nov 2024 16:06:11,429 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,429 INFO : Inserting sp|P0C0L4|CO4A_HUMAN / sp|P0C0L5|CO4B_HUMAN
14 Nov 2024 16:06:11,438 INFO : 30% Done
14 Nov 2024 16:06:11,446 INFO : 31% Done
14 Nov 2024 16:06:11,457 INFO : 32% Done
14 Nov 2024 16:06:11,460 DEBUG: Total peptides inserted: 7
14 Nov 2024 16:06:11,460 INFO : Inserting sp|P13637|AT1A3_HUMAN
14 Nov 2024 16:06:11,467 INFO : 33% Done
14 Nov 2024 16:06:11,469 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,469 INFO : Inserting sp|P15153|RAC2_HUMAN
14 Nov 2024 16:06:11,476 INFO : 34% Done
14 Nov 2024 16:06:11,487 INFO : 35% Done
14 Nov 2024 16:06:11,493 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:11,493 INFO : Inserting sp|P62873|GBB1_HUMAN
14 Nov 2024 16:06:11,497 INFO : 36% Done
14 Nov 2024 16:06:11,500 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,500 INFO : Inserting sp|P09871|C1S_HUMAN
14 Nov 2024 16:06:11,507 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,507 INFO : Inserting sp|P19823|ITIH2_HUMAN
14 Nov 2024 16:06:11,511 INFO : 37% Done
14 Nov 2024 16:06:11,518 INFO : 38% Done
14 Nov 2024 16:06:11,528 INFO : 39% Done
14 Nov 2024 16:06:11,531 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:11,531 INFO : Inserting sp|P53618|COPB_HUMAN
14 Nov 2024 16:06:11,539 INFO : 40% Done
14 Nov 2024 16:06:11,546 INFO : 41% Done
14 Nov 2024 16:06:11,552 DEBUG: Total peptides inserted: 5
14 Nov 2024 16:06:11,552 INFO : Inserting sp|O00154|BACH_HUMAN
14 Nov 2024 16:06:11,558 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,559 INFO : 42% Done
14 Nov 2024 16:06:11,559 INFO : Inserting sp|A4D1S5|RAB19_HUMAN
14 Nov 2024 16:06:11,565 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,565 INFO : Inserting sp|Q02750|MP2K1_HUMAN
14 Nov 2024 16:06:11,572 INFO : 43% Done
14 Nov 2024 16:06:11,575 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,575 INFO : Inserting sp|Q08380|LG3BP_HUMAN
14 Nov 2024 16:06:11,581 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,582 INFO : Inserting sp|Q15286|RAB35_HUMAN
14 Nov 2024 16:06:11,585 INFO : 44% Done
14 Nov 2024 16:06:11,592 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,592 INFO : Inserting sp|P16671|CD36_HUMAN
14 Nov 2024 16:06:11,599 INFO : 45% Done
14 Nov 2024 16:06:11,602 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,602 INFO : Inserting sp|P02768|ALBU_HUMAN
14 Nov 2024 16:06:11,608 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,608 INFO : Inserting sp|P60763|RAC3_HUMAN
14 Nov 2024 16:06:11,611 INFO : 46% Done
14 Nov 2024 16:06:11,618 INFO : 47% Done
14 Nov 2024 16:06:11,624 DEBUG: Total peptides inserted: 4
14 Nov 2024 16:06:11,624 INFO : Inserting sp|O95154|ARK73_HUMAN
14 Nov 2024 16:06:11,630 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,631 INFO : 48% Done
14 Nov 2024 16:06:11,631 INFO : Inserting sp|P00734|THRB_HUMAN
14 Nov 2024 16:06:11,641 INFO : 49% Done
14 Nov 2024 16:06:11,649 INFO : 50% Done
14 Nov 2024 16:06:11,656 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:11,656 INFO : Inserting sp|P31946|1433B_HUMAN
14 Nov 2024 16:06:11,662 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,663 INFO : 51% Done
14 Nov 2024 16:06:11,663 INFO : Inserting sp|Q8WXH0|SYNE2_HUMAN
14 Nov 2024 16:06:11,670 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,670 INFO : Inserting sp|Q14190|SIM2_HUMAN
14 Nov 2024 16:06:11,674 INFO : 52% Done
14 Nov 2024 16:06:11,677 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,677 INFO : Inserting sp|P51153|RAB13_HUMAN
14 Nov 2024 16:06:11,683 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,683 INFO : Inserting sp|Q9BQE3|TBA1C_HUMAN
14 Nov 2024 16:06:11,687 INFO : 53% Done
14 Nov 2024 16:06:11,690 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,690 INFO : Inserting sp|O60518|RNBP6_HUMAN
14 Nov 2024 16:06:11,697 INFO : 54% Done
14 Nov 2024 16:06:11,700 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,700 INFO : Inserting sp|Q04917|1433F_HUMAN
14 Nov 2024 16:06:11,706 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,706 INFO : Inserting sp|A5A3E0|POTEF_HUMAN
14 Nov 2024 16:06:11,710 INFO : 55% Done
14 Nov 2024 16:06:11,713 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,713 INFO : Inserting sp|P04406|G3P_HUMAN
14 Nov 2024 16:06:11,724 INFO : 56% Done
14 Nov 2024 16:06:11,731 INFO : 57% Done
14 Nov 2024 16:06:11,734 DEBUG: Total peptides inserted: 5
14 Nov 2024 16:06:11,734 INFO : Inserting sp|P38646|GRP75_HUMAN
14 Nov 2024 16:06:11,741 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,741 INFO : Inserting sp|Q9H082|RB33B_HUMAN
14 Nov 2024 16:06:11,747 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,747 INFO : Inserting sp|P0CG38|POTEI_HUMAN
14 Nov 2024 16:06:11,751 INFO : 58% Done
14 Nov 2024 16:06:11,754 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,754 INFO : Inserting sp|P61026|RAB10_HUMAN
14 Nov 2024 16:06:11,761 INFO : 59% Done
14 Nov 2024 16:06:11,769 INFO : 60% Done
14 Nov 2024 16:06:11,775 DEBUG: Total peptides inserted: 5
14 Nov 2024 16:06:11,775 INFO : Inserting sp|P21333|FLNA_HUMAN
14 Nov 2024 16:06:11,779 INFO : 61% Done
14 Nov 2024 16:06:11,782 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,782 INFO : Inserting sp|Q15582|BGH3_HUMAN
14 Nov 2024 16:06:11,789 INFO : 62% Done
14 Nov 2024 16:06:11,801 INFO : 63% Done
14 Nov 2024 16:06:11,808 INFO : 64% Done
14 Nov 2024 16:06:11,811 DEBUG: Total peptides inserted: 7
14 Nov 2024 16:06:11,811 INFO : Inserting sp|P61981|1433G_HUMAN
14 Nov 2024 16:06:11,818 INFO : 65% Done
14 Nov 2024 16:06:11,827 DEBUG: Total peptides inserted: 4
14 Nov 2024 16:06:11,827 INFO : Inserting sp|P21796|VDAC1_HUMAN
14 Nov 2024 16:06:11,831 INFO : 66% Done
14 Nov 2024 16:06:11,834 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,834 INFO : Inserting sp|O14672|ADA10_HUMAN
14 Nov 2024 16:06:11,841 INFO : 67% Done
14 Nov 2024 16:06:11,849 INFO : 68% Done
14 Nov 2024 16:06:11,856 DEBUG: Total peptides inserted: 5
14 Nov 2024 16:06:11,856 INFO : Inserting sp|P48735|IDHP_HUMAN
14 Nov 2024 16:06:11,863 INFO : 69% Done
14 Nov 2024 16:06:11,871 INFO : 70% Done
14 Nov 2024 16:06:11,881 INFO : 71% Done
14 Nov 2024 16:06:11,888 INFO : 72% Done
14 Nov 2024 16:06:11,895 INFO : 73% Done
14 Nov 2024 16:06:11,898 DEBUG: Total peptides inserted: 11
14 Nov 2024 16:06:11,898 INFO : Inserting sp|O43488|ARK72_HUMAN
14 Nov 2024 16:06:11,909 INFO : 74% Done
14 Nov 2024 16:06:11,915 DEBUG: Total peptides inserted: 4
14 Nov 2024 16:06:11,915 INFO : Inserting sp|P36507|MP2K2_HUMAN
14 Nov 2024 16:06:11,925 INFO : 75% Done
14 Nov 2024 16:06:11,928 DEBUG: Total peptides inserted: 3
14 Nov 2024 16:06:11,928 INFO : Inserting sp|P13645|K1C10_HUMAN
14 Nov 2024 16:06:11,933 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,933 INFO : Inserting sp|Q8WWB5|PIHD2_HUMAN
14 Nov 2024 16:06:11,939 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,939 INFO : Inserting sp|O75874|IDHC_HUMAN
14 Nov 2024 16:06:11,943 INFO : 76% Done
14 Nov 2024 16:06:11,949 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,949 INFO : Inserting sp|P00742|FA10_HUMAN
14 Nov 2024 16:06:11,953 INFO : 77% Done
14 Nov 2024 16:06:11,956 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,956 INFO : Inserting sp|P27348|1433T_HUMAN
14 Nov 2024 16:06:11,965 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,966 INFO : 78% Done
14 Nov 2024 16:06:11,966 INFO : Inserting sp|P02760|AMBP_HUMAN
14 Nov 2024 16:06:11,975 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:11,976 INFO : Inserting sp|P22891|PROZ_HUMAN
14 Nov 2024 16:06:11,979 INFO : 79% Done
14 Nov 2024 16:06:11,983 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:11,983 INFO : Inserting sp|P62258|1433E_HUMAN
14 Nov 2024 16:06:11,990 INFO : 80% Done
14 Nov 2024 16:06:12,001 INFO : 81% Done
14 Nov 2024 16:06:12,008 INFO : 82% Done
14 Nov 2024 16:06:12,017 DEBUG: Total peptides inserted: 9
14 Nov 2024 16:06:12,018 INFO : 83% Done
14 Nov 2024 16:06:12,018 INFO : Inserting sp|Q06033|ITIH3_HUMAN
14 Nov 2024 16:06:12,024 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:12,024 INFO : Inserting sp|P07225|PROS_HUMAN
14 Nov 2024 16:06:12,032 INFO : 84% Done
14 Nov 2024 16:06:12,035 DEBUG: Total peptides inserted: 2
14 Nov 2024 16:06:12,035 INFO : Inserting sp|P19827|ITIH1_HUMAN
14 Nov 2024 16:06:12,042 INFO : 85% Done
14 Nov 2024 16:06:12,050 INFO : 86% Done
14 Nov 2024 16:06:12,062 INFO : 87% Done
14 Nov 2024 16:06:12,069 INFO : 88% Done
14 Nov 2024 16:06:12,080 INFO : 89% Done
14 Nov 2024 16:06:12,083 DEBUG: Total peptides inserted: 12
14 Nov 2024 16:06:12,083 INFO : Inserting sp|Q92777|SYN2_HUMAN
14 Nov 2024 16:06:12,089 DEBUG: Total peptides inserted: 1
14 Nov 2024 16:06:12,089 INFO : Inserting sp|P19367|HXK1_HUMAN
14 Nov 2024 16:06:12,093 INFO : 90% Done
14 Nov 2024 16:06:12,104 INFO : 91% Done
14 Nov 2024 16:06:12,111 INFO : 92% Done
14 Nov 2024 16:06:12,114 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:12,114 INFO : Inserting sp|O00410|IPO5_HUMAN
14 Nov 2024 16:06:12,121 INFO : 93% Done
14 Nov 2024 16:06:12,132 INFO : 94% Done
14 Nov 2024 16:06:12,138 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:12,138 INFO : Inserting sp|P63000|RAC1_HUMAN
14 Nov 2024 16:06:12,142 INFO : 95% Done
14 Nov 2024 16:06:12,149 INFO : 96% Done
14 Nov 2024 16:06:12,159 INFO : 97% Done
14 Nov 2024 16:06:12,162 DEBUG: Total peptides inserted: 6
14 Nov 2024 16:06:12,162 INFO : Inserting sp|P00924|ENO1_YEAST
14 Nov 2024 16:06:12,170 INFO : 98% Done
14 Nov 2024 16:06:12,176 DEBUG: Total peptides inserted: 3
14 Nov 2024 16:06:12,176 INFO : Done parsing Skyline document.
14 Nov 2024 16:06:12,346 INFO : Creating and populating temp tables for Proportion values
14 Nov 2024 16:06:12,352 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
14 Nov 2024 16:06:12,369 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
14 Nov 2024 16:06:12,381 INFO : Cleaning up temp tables
14 Nov 2024 16:06:12,807 INFO : Completed import of Skyline document from EVpep_4qisearch_allpep_2024-11-14_16-05-54.sky.zip
14 Nov 2024 16:06:12,810 INFO : 100% Done
14 Nov 2024 16:06:13,043 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'