24 Jun 2025 22:42:24,588 INFO : Validating data for a ProteomeXchange submission.

24 Jun 2025 22:42:24,588 INFO : =======================================

24 Jun 2025 22:42:24,599 DEBUG: Resetting Job ID: eaa4e1b3-33b4-103e-9c0d-1cc91aa94300

24 Jun 2025 22:42:24,616 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'

24 Jun 2025 22:42:24,617 INFO : Validating data for experiment Id: 2077, validation Id: 1643

24 Jun 2025 22:42:24,657 INFO : Validating data for 9 Skyline documents in 1 folders

24 Jun 2025 22:42:24,774 INFO : Sample file validation for Skyline document: LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick_2024-06-02_15-26-11.sky.zip

24 Jun 2025 22:42:24,774 INFO :   Found all sample files.

24 Jun 2025 22:42:24,879 INFO : Sample file validation for Skyline document: OT_GPF_PRM_survey_MMCC_boundaries_opttrans_nochick_2024-06-03_14-36-08.sky.zip

24 Jun 2025 22:42:24,879 INFO :   Found all sample files.

24 Jun 2025 22:42:24,914 INFO : Sample file validation for Skyline document: Exp_CSF_MMCC_quant_all_adjBound_opttrans_nochick_2024-06-03_14-53-02.sky.zip

24 Jun 2025 22:42:24,914 INFO :   Found all sample files.

24 Jun 2025 22:42:24,943 INFO : Sample file validation for Skyline document: CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip

24 Jun 2025 22:42:24,943 INFO :   Found all sample files.

24 Jun 2025 22:42:25,033 INFO : Sample file validation for Skyline document: 230124_p2_neo_30min_3500targets_opt_trans_pepleveldilution_2024-06-04_06-58-16.sky.zip

24 Jun 2025 22:42:25,033 INFO :   Found all sample files.

24 Jun 2025 22:42:25,157 INFO : Sample file validation for Skyline document: 230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip

24 Jun 2025 22:42:25,157 INFO :   Found all sample files.

24 Jun 2025 22:42:25,185 INFO : Sample file validation for Skyline document: 240207_gpf_2024-06-04_10-24-18.sky.zip

24 Jun 2025 22:42:25,185 INFO :   Found all sample files.

24 Jun 2025 22:42:25,207 INFO : Sample file validation for Skyline document: 2024-05 CSF LIT GPF-MSFragger-3.sky.zip

24 Jun 2025 22:42:25,207 INFO :   Found all sample files.

24 Jun 2025 22:42:25,214 INFO : Sample file validation for Skyline document: Exp_CSF_GPF_A_2024-05-06_21-16-47.sky.zip

24 Jun 2025 22:42:25,214 INFO :   Found all sample files.

24 Jun 2025 22:42:25,334 INFO : Modifications validation:

24 Jun 2025 22:42:25,334 INFO : VALID MODIFICATIONS:

24 Jun 2025 22:42:25,334 INFO : 11404: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl

24 Jun 2025 22:42:25,334 INFO :     CSF_neurod105_assay_individuals_manual_2024-06-03_15-26-36.sky.zip

24 Jun 2025 22:42:25,334 INFO :     240207_gpf_2024-06-04_10-24-18.sky.zip

24 Jun 2025 22:42:25,334 INFO :     OT_GPF_PRM_survey_MMCC_boundaries_opttrans_nochick_2024-06-03_14-36-08.sky.zip

24 Jun 2025 22:42:25,334 INFO :     230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip

24 Jun 2025 22:42:25,334 INFO :     2024-05 CSF LIT GPF-MSFragger-3.sky.zip

24 Jun 2025 22:42:25,334 INFO :     Exp_CSF_MMCC_quant_all_adjBound_opttrans_nochick_2024-06-03_14-53-02.sky.zip

24 Jun 2025 22:42:25,334 INFO :     LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick_2024-06-02_15-26-11.sky.zip

24 Jun 2025 22:42:25,334 INFO :     230124_p2_neo_30min_3500targets_opt_trans_pepleveldilution_2024-06-04_06-58-16.sky.zip

24 Jun 2025 22:42:25,334 INFO :     Exp_CSF_GPF_A_2024-05-06_21-16-47.sky.zip

24 Jun 2025 22:42:25,334 INFO : 11405: Oxidation (M): UNIMOD:35 - Oxidation

24 Jun 2025 22:42:25,334 INFO :     230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip

24 Jun 2025 22:42:25,334 INFO :     230124_p2_neo_30min_3500targets_opt_trans_pepleveldilution_2024-06-04_06-58-16.sky.zip

24 Jun 2025 22:42:25,334 INFO : 11406: Label:13C(6)15N(2) (C-term K): 

24 Jun 2025 22:42:25,334 INFO :     230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip

24 Jun 2025 22:42:25,334 INFO : 11407: Label:13C(6)15N(4) (C-term R): 

24 Jun 2025 22:42:25,334 INFO :     230305_ev2_prm_final_inj1_2024-06-04_07-32-10.sky.zip

24 Jun 2025 22:42:25,335 INFO : INVALID MODIFICATIONS (No Unimod ID):

24 Jun 2025 22:42:25,336 INFO : Validating spectral library: 240207_gpf.blib

24 Jun 2025 22:42:25,436 INFO : '240207_gpf' (240207_gpf.blib) library in 1 Skyline documents was built with 8 raw files; 1 peptide Id files. Status: VALID

24 Jun 2025 22:42:25,437 INFO : Validating spectral library: LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick.blib

24 Jun 2025 22:42:25,597 INFO : 'LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick' (LIT_GPF_survey_newAlign_MMCC_boundaries_opttrans_nochick.blib) library in 1 Skyline documents was built with 12 raw files; 6 peptide Id files. Status: VALID

24 Jun 2025 22:42:25,598 INFO : Validating spectral library: Exp_CSF_MMCC_compquant.elib

24 Jun 2025 22:42:25,961 INFO : 'Exp_CSF_MMCC_quant' (Exp_CSF_MMCC_compquant.elib) library in 1 Skyline documents was built with 27 raw files; 0 peptide Id files. Status: VALID

24 Jun 2025 22:42:25,962 INFO : Validating spectral library: ES904_Neo_PRTC.blib

24 Jun 2025 22:42:25,981 INFO : 'ES904 Neo PRTC' (ES904_Neo_PRTC.blib) library in 1 Skyline documents was built with 1 raw files; 0 peptide Id files. Status: Prosit / Koina Library

24 Jun 2025 22:42:25,981 INFO :   MISSING FILES:

24 Jun 2025 22:42:25,981 INFO :     Spectrum File: Prositintensity_prosit_publication_v1

24 Jun 2025 22:42:25,982 INFO : Validating spectral library: 230304_ev2pool_survey_reddb.blib

24 Jun 2025 22:42:26,099 INFO : '230305_ev2_prm' (230304_ev2pool_survey_reddb.blib) library in 1 Skyline documents was built with 6 raw files; 1 peptide Id files. Status: VALID

24 Jun 2025 22:42:26,100 INFO : Validating spectral library: 2024-05 CSF LIT GPF-MSFragger-3.blib

24 Jun 2025 22:42:26,256 INFO : '2024-05 CSF LIT GPF-MSFragger-3' (2024-05 CSF LIT GPF-MSFragger-3.blib) library in 1 Skyline documents was built with 12 raw files; 6 peptide Id files. Status: VALID

24 Jun 2025 22:42:26,257 INFO : Validating spectral library: Exp_CSF_GPF_A.elib

24 Jun 2025 22:42:26,508 INFO : 'Exp_CSF_GPF_A' (Exp_CSF_GPF_A.elib) library in 2 Skyline documents was built with 6 raw files; 0 peptide Id files. Status: VALID

24 Jun 2025 22:42:26,509 INFO : Validating spectral library: 230120_p2_neo_30min_reddb_dia1th_survey.blib

24 Jun 2025 22:42:26,656 INFO : '230120_p2_neo_30min_reddb_dia1th_survey (230124_p2_neo_30min_redb_50human50chicken_check)' (230120_p2_neo_30min_reddb_dia1th_survey.blib) library in 1 Skyline documents was built with 6 raw files; 1 peptide Id files. Status: VALID

24 Jun 2025 22:42:26,657 INFO : Validating spectral library: CSF_neurod105_assay_individuals_manual.blib

24 Jun 2025 22:42:26,706 INFO : 'CSF_neurod105_assay_individuals_manual' (CSF_neurod105_assay_individuals_manual.blib) library in 1 Skyline documents was built with 8 raw files; 1 peptide Id files. Status: VALID

24 Jun 2025 22:42:26,706 INFO : Spectral library validation complete.

24 Jun 2025 22:42:26,706 INFO : Data validation is complete. Status is Complete

24 Jun 2025 22:42:26,706 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'