09 Jun 2025 06:45:19,400 DEBUG: Resetting Job ID: c2b7a5f2-2765-103e-9c0d-1cc91aa94300
09 Jun 2025 06:45:19,417 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
09 Jun 2025 06:45:19,418 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-09_09-45-17.sky.zip
09 Jun 2025 06:45:19,418 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
09 Jun 2025 06:45:19,639 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
09 Jun 2025 06:45:19,643 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
09 Jun 2025 06:45:19,647 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
09 Jun 2025 06:45:19,647 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
09 Jun 2025 06:45:19,649 INFO : 2% Done
09 Jun 2025 06:45:19,649 INFO : Copying SKYD to temp directory for import purposes
09 Jun 2025 06:45:19,699 INFO : Copying complete
09 Jun 2025 06:45:19,699 DEBUG: Starting to load chromatogram headers
09 Jun 2025 06:45:19,699 DEBUG: Done loading chromatogram headers
09 Jun 2025 06:45:19,883 INFO : Inserting gi|162648|gb|AAA51411.1|
09 Jun 2025 06:45:19,888 INFO : 10% Done
09 Jun 2025 06:45:19,914 INFO : 19% Done
09 Jun 2025 06:45:19,944 INFO : 26% Done
09 Jun 2025 06:45:19,970 INFO : 37% Done
09 Jun 2025 06:45:20,003 INFO : 48% Done
09 Jun 2025 06:45:20,039 INFO : 60% Done
09 Jun 2025 06:45:20,074 DEBUG: Total peptides inserted: 6
09 Jun 2025 06:45:20,074 INFO : Done parsing Skyline document.
09 Jun 2025 06:45:20,109 INFO : No group comparisons found.
09 Jun 2025 06:45:20,109 INFO : Calculating calibration curves
09 Jun 2025 06:45:20,110 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
09 Jun 2025 06:45:20,179 INFO : 68% Done
09 Jun 2025 06:45:20,180 INFO : Done calculating calibration curves.
09 Jun 2025 06:45:20,181 INFO : Updating previously imported data for 28 old sample files.
09 Jun 2025 06:45:20,181 DEBUG: Found data for the following old sample files in the QC folder:
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-01.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250524065009.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-03.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20240126_QC_BSA-003_20250523094527.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001_20250520195858.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-02.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-001.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250520_QC_BSA-002.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-03.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
09 Jun 2025 06:45:20,181 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
09 Jun 2025 06:45:20,182 DEBUG: D:\QC\QC_BSA\20250606_BSA-QC-01.raw
09 Jun 2025 06:45:20,182 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
09 Jun 2025 06:45:20,182 DEBUG: D:\QC\QC_BSA\20250603_BSA-QC-02.raw
09 Jun 2025 06:45:20,182 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
09 Jun 2025 06:45:23,675 INFO : 98% Done
09 Jun 2025 06:45:23,675 INFO : Done updating previously imported sample file data.
09 Jun 2025 06:45:24,242 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-08_11-15-16.sky.zip have been updated with newer data.
09 Jun 2025 06:45:24,242 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-08_11-15-16.sky.zip
09 Jun 2025 06:45:24,242 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-06-08_11-15-16
09 Jun 2025 06:45:24,242 INFO : Creating and populating temp tables for Proportion values
09 Jun 2025 06:45:24,246 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
09 Jun 2025 06:45:24,250 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
09 Jun 2025 06:45:24,253 INFO : Cleaning up temp tables
09 Jun 2025 06:45:24,785 INFO : Deleted temp copy of SKYD file
09 Jun 2025 06:45:24,785 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-09_09-45-17.sky.zip
09 Jun 2025 06:45:24,787 INFO : 100% Done
09 Jun 2025 06:45:25,007 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'