06 Jun 2025 08:51:10,632 DEBUG: Resetting Job ID: ac35daff-251b-103e-9c0d-1cc91aa94300
06 Jun 2025 08:51:10,647 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
06 Jun 2025 08:51:10,648 INFO : Starting to import Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-06_11-51-07.sky.zip
06 Jun 2025 08:51:10,648 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.skyd
06 Jun 2025 08:51:10,806 INFO : Expanding METRIC_Eclipse_PSB_All_QCs.sky
06 Jun 2025 08:51:10,810 INFO : Reading Skyline file, METRIC_Eclipse_PSB_All_QCs.sky, to determine if the TransitionChromInfos in the document should be stored...
06 Jun 2025 08:51:10,813 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
06 Jun 2025 08:51:10,813 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
06 Jun 2025 08:51:10,814 INFO : 2% Done
06 Jun 2025 08:51:10,814 INFO : Copying SKYD to temp directory for import purposes
06 Jun 2025 08:51:10,853 INFO : Copying complete
06 Jun 2025 08:51:10,853 DEBUG: Starting to load chromatogram headers
06 Jun 2025 08:51:10,854 DEBUG: Done loading chromatogram headers
06 Jun 2025 08:51:10,941 INFO : 3% Done
06 Jun 2025 08:51:10,941 INFO : Inserting gi|162648|gb|AAA51411.1|
06 Jun 2025 08:51:10,946 INFO : 10% Done
06 Jun 2025 08:51:10,970 INFO : 19% Done
06 Jun 2025 08:51:10,997 INFO : 26% Done
06 Jun 2025 08:51:11,021 INFO : 37% Done
06 Jun 2025 08:51:11,051 INFO : 49% Done
06 Jun 2025 08:51:11,082 INFO : 60% Done
06 Jun 2025 08:51:11,115 DEBUG: Total peptides inserted: 6
06 Jun 2025 08:51:11,115 INFO : Done parsing Skyline document.
06 Jun 2025 08:51:11,209 INFO : No group comparisons found.
06 Jun 2025 08:51:11,209 INFO : Calculating calibration curves
06 Jun 2025 08:51:11,209 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1
06 Jun 2025 08:51:11,264 INFO : 68% Done
06 Jun 2025 08:51:11,266 INFO : Done calculating calibration curves.
06 Jun 2025 08:51:11,266 INFO : Updating previously imported data for 17 old sample files.
06 Jun 2025 08:51:11,266 DEBUG: Found data for the following old sample files in the QC folder:
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01_20241021152050.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_004.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_002.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_001.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20220410_QC_BSA-001.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021-Blank_08.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-02.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-04.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002_20250414080941.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_003.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_005.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021-Kritika-AmylinLiverCD11c-DDA_004.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-01.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250214_BSA-QC_006.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20250410_QC_BSA-002.raw
06 Jun 2025 08:51:11,266 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-05.raw
06 Jun 2025 08:51:11,267 DEBUG: D:\QC\QC_BSA\20241021_BSA-QC-03.raw
06 Jun 2025 08:51:13,443 INFO : 98% Done
06 Jun 2025 08:51:13,443 INFO : Done updating previously imported sample file data.
06 Jun 2025 08:51:14,098 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-04-14_09-25-23.sky.zip have been updated with newer data.
06 Jun 2025 08:51:14,098 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-04-14_09-25-23.sky.zip
06 Jun 2025 08:51:14,099 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC Proteomics QC/Eclipse_PSB/@files/METRIC_Eclipse_PSB_All_QCs_2025-04-14_09-25-23
06 Jun 2025 08:51:14,099 INFO : Creating and populating temp tables for Proportion values
06 Jun 2025 08:51:14,103 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
06 Jun 2025 08:51:14,107 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
06 Jun 2025 08:51:14,109 INFO : Cleaning up temp tables
06 Jun 2025 08:51:14,588 INFO : Deleted temp copy of SKYD file
06 Jun 2025 08:51:14,588 INFO : Completed import of Skyline document from METRIC_Eclipse_PSB_All_QCs_2025-06-06_11-51-07.sky.zip
06 Jun 2025 08:51:14,590 INFO : 100% Done
06 Jun 2025 08:51:14,811 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'