04 Apr 2023 14:37:42,572 DEBUG: Resetting Job ID: c316ab52-b55e-103b-a13f-fea6ddf5751c

04 Apr 2023 14:37:42,591 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

04 Apr 2023 14:37:42,592 INFO : Starting to import Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_17-37-37.sky.zip

04 Apr 2023 14:37:42,593 INFO : Expanding METRIC_Exploris_Tox_All_QCs.skyd

04 Apr 2023 14:37:43,199 INFO : Expanding METRIC_Exploris_Tox_All_QCs.sky

04 Apr 2023 14:37:43,356 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13

04 Apr 2023 14:37:43,361 INFO : 2% Done

04 Apr 2023 14:37:43,521 DEBUG: Starting to load chromatogram headers

04 Apr 2023 14:37:43,523 DEBUG: Done loading chromatogram headers

04 Apr 2023 14:37:43,775 INFO : Inserting gi|162648|gb|AAA51411.1|

04 Apr 2023 14:37:43,797 INFO : 10% Done

04 Apr 2023 14:37:43,914 INFO : 19% Done

04 Apr 2023 14:37:44,042 INFO : 26% Done

04 Apr 2023 14:37:44,178 INFO : 37% Done

04 Apr 2023 14:37:44,350 INFO : 49% Done

04 Apr 2023 14:37:44,524 INFO : 60% Done

04 Apr 2023 14:37:44,655 DEBUG: Total peptides inserted: 6

04 Apr 2023 14:37:44,656 INFO : Done parsing Skyline document.

04 Apr 2023 14:37:44,711 INFO : No group comparisons found.

04 Apr 2023 14:37:44,711 INFO : Calculating calibration curves

04 Apr 2023 14:37:44,712 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1

04 Apr 2023 14:37:44,874 INFO : 68% Done

04 Apr 2023 14:37:44,875 INFO : Done calculating calibration curves.

04 Apr 2023 14:37:44,882 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_002.raw in QC folder. 1 of 92

04 Apr 2023 14:37:44,887 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220913083429.raw in QC folder. 2 of 92

04 Apr 2023 14:37:44,889 INFO : 69% Done

04 Apr 2023 14:37:44,894 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221214-QC_BSA-001.raw in QC folder. 3 of 92

04 Apr 2023 14:37:44,899 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_003.raw in QC folder. 4 of 92

04 Apr 2023 14:37:44,905 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005.raw in QC folder. 5 of 92

04 Apr 2023 14:37:44,906 INFO : 70% Done

04 Apr 2023 14:37:44,911 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_010.raw in QC folder. 6 of 92

04 Apr 2023 14:37:44,916 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-001.raw in QC folder. 7 of 92

04 Apr 2023 14:37:44,921 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-009.raw in QC folder. 8 of 92

04 Apr 2023 14:37:44,922 INFO : 71% Done

04 Apr 2023 14:37:44,928 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_011.raw in QC folder. 9 of 92

04 Apr 2023 14:37:44,933 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-006.raw in QC folder. 10 of 92

04 Apr 2023 14:37:44,938 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-002.raw in QC folder. 11 of 92

04 Apr 2023 14:37:44,939 INFO : 72% Done

04 Apr 2023 14:37:44,944 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-005.raw in QC folder. 12 of 92

04 Apr 2023 14:37:44,950 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_004.raw in QC folder. 13 of 92

04 Apr 2023 14:37:44,955 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_001.raw in QC folder. 14 of 92

04 Apr 2023 14:37:44,956 INFO : 73% Done

04 Apr 2023 14:37:44,961 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-008.raw in QC folder. 15 of 92

04 Apr 2023 14:37:44,967 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-007.raw in QC folder. 16 of 92

04 Apr 2023 14:37:44,972 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-006.raw in QC folder. 17 of 92

04 Apr 2023 14:37:44,978 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-001.raw in QC folder. 18 of 92

04 Apr 2023 14:37:44,979 INFO : 74% Done

04 Apr 2023 14:37:44,984 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221012-QC_BSA-004.raw in QC folder. 19 of 92

04 Apr 2023 14:37:44,989 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-007.raw in QC folder. 20 of 92

04 Apr 2023 14:37:44,990 INFO : 75% Done

04 Apr 2023 14:37:44,996 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-003.raw in QC folder. 21 of 92

04 Apr 2023 14:37:45,001 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-008.raw in QC folder. 22 of 92

04 Apr 2023 14:37:45,006 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_005.raw in QC folder. 23 of 92

04 Apr 2023 14:37:45,007 INFO : 76% Done

04 Apr 2023 14:37:45,013 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-007.raw in QC folder. 24 of 92

04 Apr 2023 14:37:45,019 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-003.raw in QC folder. 25 of 92

04 Apr 2023 14:37:45,024 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-011.raw in QC folder. 26 of 92

04 Apr 2023 14:37:45,030 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_006.raw in QC folder. 27 of 92

04 Apr 2023 14:37:45,031 INFO : 77% Done

04 Apr 2023 14:37:45,036 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-002.raw in QC folder. 28 of 92

04 Apr 2023 14:37:45,042 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220911174000.raw in QC folder. 29 of 92

04 Apr 2023 14:37:45,043 INFO : 78% Done

04 Apr 2023 14:37:45,048 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_004.raw in QC folder. 30 of 92

04 Apr 2023 14:37:45,054 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-003.raw in QC folder. 31 of 92

04 Apr 2023 14:37:45,059 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-002.raw in QC folder. 32 of 92

04 Apr 2023 14:37:45,060 INFO : 79% Done

04 Apr 2023 14:37:45,066 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-006.raw in QC folder. 33 of 92

04 Apr 2023 14:37:45,071 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-009.raw in QC folder. 34 of 92

04 Apr 2023 14:37:45,077 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-008.raw in QC folder. 35 of 92

04 Apr 2023 14:37:45,082 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-004.raw in QC folder. 36 of 92

04 Apr 2023 14:37:45,083 INFO : 80% Done

04 Apr 2023 14:37:45,088 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_001.raw in QC folder. 37 of 92

04 Apr 2023 14:37:45,094 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_002.raw in QC folder. 38 of 92

04 Apr 2023 14:37:45,099 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-001.raw in QC folder. 39 of 92

04 Apr 2023 14:37:45,128 INFO : 81% Done

04 Apr 2023 14:37:45,134 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-010.raw in QC folder. 40 of 92

04 Apr 2023 14:37:45,140 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_003.raw in QC folder. 41 of 92

04 Apr 2023 14:37:45,175 INFO : 82% Done

04 Apr 2023 14:37:45,181 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-001.raw in QC folder. 42 of 92

04 Apr 2023 14:37:45,186 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-004.raw in QC folder. 43 of 92

04 Apr 2023 14:37:45,191 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-001.raw in QC folder. 44 of 92

04 Apr 2023 14:37:45,197 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-013.raw in QC folder. 45 of 92

04 Apr 2023 14:37:45,198 INFO : 83% Done

04 Apr 2023 14:37:45,203 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-001.raw in QC folder. 46 of 92

04 Apr 2023 14:37:45,208 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_007.raw in QC folder. 47 of 92

04 Apr 2023 14:37:45,214 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001_20221103135624.raw in QC folder. 48 of 92

04 Apr 2023 14:37:45,215 INFO : 84% Done

04 Apr 2023 14:37:45,220 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-005.raw in QC folder. 49 of 92

04 Apr 2023 14:37:45,225 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-004.raw in QC folder. 50 of 92

04 Apr 2023 14:37:45,230 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-005.raw in QC folder. 51 of 92

04 Apr 2023 14:37:45,231 INFO : 85% Done

04 Apr 2023 14:37:45,236 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220815-QC_BSA-004.raw in QC folder. 52 of 92

04 Apr 2023 14:37:45,242 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-005.raw in QC folder. 53 of 92

04 Apr 2023 14:37:45,247 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-004.raw in QC folder. 54 of 92

04 Apr 2023 14:37:45,248 INFO : 86% Done

04 Apr 2023 14:37:45,253 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-009.raw in QC folder. 55 of 92

04 Apr 2023 14:37:45,259 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_006.raw in QC folder. 56 of 92

04 Apr 2023 14:37:45,264 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-002.raw in QC folder. 57 of 92

04 Apr 2023 14:37:45,265 INFO : 87% Done

04 Apr 2023 14:37:45,270 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-001.raw in QC folder. 58 of 92

04 Apr 2023 14:37:45,276 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-003.raw in QC folder. 59 of 92

04 Apr 2023 14:37:45,281 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-004.raw in QC folder. 60 of 92

04 Apr 2023 14:37:45,283 INFO : 88% Done

04 Apr 2023 14:37:45,288 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001.raw in QC folder. 61 of 92

04 Apr 2023 14:37:45,293 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-006.raw in QC folder. 62 of 92

04 Apr 2023 14:37:45,299 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-003.raw in QC folder. 63 of 92

04 Apr 2023 14:37:45,304 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_009.raw in QC folder. 64 of 92

04 Apr 2023 14:37:45,305 INFO : 89% Done

04 Apr 2023 14:37:45,310 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-002.raw in QC folder. 65 of 92

04 Apr 2023 14:37:45,315 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-012.raw in QC folder. 66 of 92

04 Apr 2023 14:37:45,316 INFO : 90% Done

04 Apr 2023 14:37:45,322 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-002.raw in QC folder. 67 of 92

04 Apr 2023 14:37:45,327 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_005.raw in QC folder. 68 of 92

04 Apr 2023 14:37:45,333 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-002.raw in QC folder. 69 of 92

04 Apr 2023 14:37:45,334 INFO : 91% Done

04 Apr 2023 14:37:45,339 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-002.raw in QC folder. 70 of 92

04 Apr 2023 14:37:45,344 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-011.raw in QC folder. 71 of 92

04 Apr 2023 14:37:45,350 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-002.raw in QC folder. 72 of 92

04 Apr 2023 14:37:45,355 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-003.raw in QC folder. 73 of 92

04 Apr 2023 14:37:45,356 INFO : 92% Done

04 Apr 2023 14:37:45,361 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-010.raw in QC folder. 74 of 92

04 Apr 2023 14:37:45,366 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_001.raw in QC folder. 75 of 92

04 Apr 2023 14:37:45,367 INFO : 93% Done

04 Apr 2023 14:37:45,373 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005_20221012151604.raw in QC folder. 76 of 92

04 Apr 2023 14:37:45,378 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-003.raw in QC folder. 77 of 92

04 Apr 2023 14:37:45,383 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-002.raw in QC folder. 78 of 92

04 Apr 2023 14:37:45,384 INFO : 94% Done

04 Apr 2023 14:37:45,390 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-001.raw in QC folder. 79 of 92

04 Apr 2023 14:37:45,395 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-001.raw in QC folder. 80 of 92

04 Apr 2023 14:37:45,400 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-002.raw in QC folder. 81 of 92

04 Apr 2023 14:37:45,406 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-010.raw in QC folder. 82 of 92

04 Apr 2023 14:37:45,407 INFO : 95% Done

04 Apr 2023 14:37:45,412 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_008.raw in QC folder. 83 of 92

04 Apr 2023 14:37:45,417 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001.raw in QC folder. 84 of 92

04 Apr 2023 14:37:45,423 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_012.raw in QC folder. 85 of 92

04 Apr 2023 14:37:45,424 INFO : 96% Done

04 Apr 2023 14:37:45,429 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_002.raw in QC folder. 86 of 92

04 Apr 2023 14:37:45,434 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230404-QC_BSA-001.raw in QC folder. 87 of 92

04 Apr 2023 14:37:45,436 INFO : 97% Done

04 Apr 2023 14:37:45,441 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005 - Copy.raw in QC folder. 88 of 92

04 Apr 2023 14:37:45,446 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005.raw in QC folder. 89 of 92

04 Apr 2023 14:37:45,451 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-005.raw in QC folder. 90 of 92

04 Apr 2023 14:37:45,457 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220817-QC_BSA-001.raw in QC folder. 91 of 92

04 Apr 2023 14:37:45,458 INFO : 98% Done

04 Apr 2023 14:37:45,463 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-004.raw in QC folder. 92 of 92

04 Apr 2023 14:37:45,463 INFO : Done updating previously imported sample file data.

04 Apr 2023 14:37:46,081 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_16-25-08.sky.zip have been updated with newer data.

04 Apr 2023 14:37:46,081 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_16-25-08.sky.zip

04 Apr 2023 14:37:46,081 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-04-04_16-25-08

04 Apr 2023 14:37:46,081 INFO : Creating and populating temp tables for Proportion values

04 Apr 2023 14:37:46,141 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

04 Apr 2023 14:37:46,162 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

04 Apr 2023 14:37:46,177 INFO : Cleaning up temp tables

04 Apr 2023 14:37:46,470 INFO : Completed import of Skyline document from METRIC_Exploris_Tox_All_QCs_2023-04-04_17-37-37.sky.zip

04 Apr 2023 14:37:46,472 INFO : 100% Done

04 Apr 2023 14:37:46,494 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'