30 Mar 2023 14:39:53,589 DEBUG: Resetting Job ID: becd70a7-b170-103b-a3e9-fea6ddf59764

30 Mar 2023 14:39:53,606 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

30 Mar 2023 14:39:53,608 INFO : Starting to import Skyline document from METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-43.sky.zip

30 Mar 2023 14:39:53,608 INFO : Expanding METRIC_Exploris_Tox_All_QCs.skyd

30 Mar 2023 14:39:56,997 INFO : Expanding METRIC_Exploris_Tox_All_QCs.sky

30 Mar 2023 14:39:57,013 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13

30 Mar 2023 14:39:57,020 INFO : 2% Done

30 Mar 2023 14:39:57,212 DEBUG: Starting to load chromatogram headers

30 Mar 2023 14:39:57,213 DEBUG: Done loading chromatogram headers

30 Mar 2023 14:39:57,563 INFO : Inserting gi|162648|gb|AAA51411.1|

30 Mar 2023 14:39:57,584 INFO : 9% Done

30 Mar 2023 14:39:57,692 INFO : 19% Done

30 Mar 2023 14:39:57,809 INFO : 26% Done

30 Mar 2023 14:39:57,930 INFO : 37% Done

30 Mar 2023 14:39:58,077 INFO : 49% Done

30 Mar 2023 14:39:58,237 INFO : 60% Done

30 Mar 2023 14:39:58,359 DEBUG: Total peptides inserted: 6

30 Mar 2023 14:39:58,361 INFO : Done parsing Skyline document.

30 Mar 2023 14:39:58,437 INFO : No group comparisons found.

30 Mar 2023 14:39:58,437 INFO : Calculating calibration curves

30 Mar 2023 14:39:58,438 DEBUG: Calculating calibration curve for gi|162648|gb|AAA51411.1|, 1 of 1

30 Mar 2023 14:39:58,628 INFO : 68% Done

30 Mar 2023 14:39:58,629 INFO : Done calculating calibration curves.

30 Mar 2023 14:39:58,636 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_002.raw in QC folder. 1 of 83

30 Mar 2023 14:39:58,642 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220913083429.raw in QC folder. 2 of 83

30 Mar 2023 14:39:58,643 INFO : 69% Done

30 Mar 2023 14:39:58,649 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221214-QC_BSA-001.raw in QC folder. 3 of 83

30 Mar 2023 14:39:58,654 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_003.raw in QC folder. 4 of 83

30 Mar 2023 14:39:58,655 INFO : 70% Done

30 Mar 2023 14:39:58,660 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005.raw in QC folder. 5 of 83

30 Mar 2023 14:39:58,665 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_010.raw in QC folder. 6 of 83

30 Mar 2023 14:39:58,671 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-001.raw in QC folder. 7 of 83

30 Mar 2023 14:39:58,676 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_011.raw in QC folder. 8 of 83

30 Mar 2023 14:39:58,677 INFO : 71% Done

30 Mar 2023 14:39:58,682 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-006.raw in QC folder. 9 of 83

30 Mar 2023 14:39:58,687 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-002.raw in QC folder. 10 of 83

30 Mar 2023 14:39:58,688 INFO : 72% Done

30 Mar 2023 14:39:58,694 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-005.raw in QC folder. 11 of 83

30 Mar 2023 14:39:58,699 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_004.raw in QC folder. 12 of 83

30 Mar 2023 14:39:58,704 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_001.raw in QC folder. 13 of 83

30 Mar 2023 14:39:58,705 INFO : 73% Done

30 Mar 2023 14:39:58,710 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-008.raw in QC folder. 14 of 83

30 Mar 2023 14:39:58,716 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-007.raw in QC folder. 15 of 83

30 Mar 2023 14:39:58,721 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-006.raw in QC folder. 16 of 83

30 Mar 2023 14:39:58,722 INFO : 74% Done

30 Mar 2023 14:39:58,728 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220819-QC_BSA-001.raw in QC folder. 17 of 83

30 Mar 2023 14:39:58,733 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221012-QC_BSA-004.raw in QC folder. 18 of 83

30 Mar 2023 14:39:58,734 INFO : 75% Done

30 Mar 2023 14:39:58,739 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-007.raw in QC folder. 19 of 83

30 Mar 2023 14:39:58,744 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-003.raw in QC folder. 20 of 83

30 Mar 2023 14:39:58,750 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-008.raw in QC folder. 21 of 83

30 Mar 2023 14:39:58,751 INFO : 76% Done

30 Mar 2023 14:39:58,756 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_005.raw in QC folder. 22 of 83

30 Mar 2023 14:39:58,761 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-007.raw in QC folder. 23 of 83

30 Mar 2023 14:39:58,766 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-003.raw in QC folder. 24 of 83

30 Mar 2023 14:39:58,767 INFO : 77% Done

30 Mar 2023 14:39:58,772 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_006.raw in QC folder. 25 of 83

30 Mar 2023 14:39:58,777 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-002.raw in QC folder. 26 of 83

30 Mar 2023 14:39:58,782 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001_20220911174000.raw in QC folder. 27 of 83

30 Mar 2023 14:39:58,783 INFO : 78% Done

30 Mar 2023 14:39:58,788 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_004.raw in QC folder. 28 of 83

30 Mar 2023 14:39:58,793 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-003.raw in QC folder. 29 of 83

30 Mar 2023 14:39:58,794 INFO : 79% Done

30 Mar 2023 14:39:58,799 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-002.raw in QC folder. 30 of 83

30 Mar 2023 14:39:58,804 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-006.raw in QC folder. 31 of 83

30 Mar 2023 14:39:58,809 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-009.raw in QC folder. 32 of 83

30 Mar 2023 14:39:58,810 INFO : 80% Done

30 Mar 2023 14:39:58,815 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-008.raw in QC folder. 33 of 83

30 Mar 2023 14:39:58,821 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-004.raw in QC folder. 34 of 83

30 Mar 2023 14:39:58,826 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_001.raw in QC folder. 35 of 83

30 Mar 2023 14:39:58,827 INFO : 81% Done

30 Mar 2023 14:39:58,832 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230217_QC_BSA_002.raw in QC folder. 36 of 83

30 Mar 2023 14:39:58,837 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220929-QC_BSA-001.raw in QC folder. 37 of 83

30 Mar 2023 14:39:58,838 INFO : 82% Done

30 Mar 2023 14:39:58,843 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_003.raw in QC folder. 38 of 83

30 Mar 2023 14:39:58,848 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-001.raw in QC folder. 39 of 83

30 Mar 2023 14:39:58,853 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-004.raw in QC folder. 40 of 83

30 Mar 2023 14:39:58,858 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-001.raw in QC folder. 41 of 83

30 Mar 2023 14:39:58,859 INFO : 83% Done

30 Mar 2023 14:39:58,865 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-001.raw in QC folder. 42 of 83

30 Mar 2023 14:39:58,869 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_007.raw in QC folder. 43 of 83

30 Mar 2023 14:39:58,870 INFO : 84% Done

30 Mar 2023 14:39:58,875 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001_20221103135624.raw in QC folder. 44 of 83

30 Mar 2023 14:39:58,880 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-005.raw in QC folder. 45 of 83

30 Mar 2023 14:39:58,885 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-004.raw in QC folder. 46 of 83

30 Mar 2023 14:39:58,886 INFO : 85% Done

30 Mar 2023 14:39:58,891 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-005.raw in QC folder. 47 of 83

30 Mar 2023 14:39:58,896 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220815-QC_BSA-004.raw in QC folder. 48 of 83

30 Mar 2023 14:39:58,901 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-005.raw in QC folder. 49 of 83

30 Mar 2023 14:39:58,902 INFO : 86% Done

30 Mar 2023 14:39:58,907 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-009.raw in QC folder. 50 of 83

30 Mar 2023 14:39:58,912 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_006.raw in QC folder. 51 of 83

30 Mar 2023 14:39:58,917 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-002.raw in QC folder. 52 of 83

30 Mar 2023 14:39:58,918 INFO : 87% Done

30 Mar 2023 14:39:58,923 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-001.raw in QC folder. 53 of 83

30 Mar 2023 14:39:58,928 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-003.raw in QC folder. 54 of 83

30 Mar 2023 14:39:58,929 INFO : 88% Done

30 Mar 2023 14:39:58,934 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-004.raw in QC folder. 55 of 83

30 Mar 2023 14:39:58,939 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220909-QC_BSA-001.raw in QC folder. 56 of 83

30 Mar 2023 14:39:58,944 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-006.raw in QC folder. 57 of 83

30 Mar 2023 14:39:58,945 INFO : 89% Done

30 Mar 2023 14:39:58,950 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_009.raw in QC folder. 58 of 83

30 Mar 2023 14:39:58,955 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-002.raw in QC folder. 59 of 83

30 Mar 2023 14:39:58,960 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221014-QC_BSA-002.raw in QC folder. 60 of 83

30 Mar 2023 14:39:58,961 INFO : 90% Done

30 Mar 2023 14:39:58,966 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_005.raw in QC folder. 61 of 83

30 Mar 2023 14:39:58,971 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-002.raw in QC folder. 62 of 83

30 Mar 2023 14:39:58,972 INFO : 91% Done

30 Mar 2023 14:39:58,977 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-002.raw in QC folder. 63 of 83

30 Mar 2023 14:39:58,982 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-011.raw in QC folder. 64 of 83

30 Mar 2023 14:39:58,987 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-003.raw in QC folder. 65 of 83

30 Mar 2023 14:39:58,992 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-010.raw in QC folder. 66 of 83

30 Mar 2023 14:39:58,993 INFO : 92% Done

30 Mar 2023 14:39:58,998 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_001.raw in QC folder. 67 of 83

30 Mar 2023 14:39:59,003 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005_20221012151604.raw in QC folder. 68 of 83

30 Mar 2023 14:39:59,004 INFO : 93% Done

30 Mar 2023 14:39:59,009 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-003.raw in QC folder. 69 of 83

30 Mar 2023 14:39:59,015 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-002.raw in QC folder. 70 of 83

30 Mar 2023 14:39:59,020 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220829-QC_BSA-001.raw in QC folder. 71 of 83

30 Mar 2023 14:39:59,021 INFO : 94% Done

30 Mar 2023 14:39:59,026 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230327-QC_BSA-001.raw in QC folder. 72 of 83

30 Mar 2023 14:39:59,031 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220908-QC_BSA-002.raw in QC folder. 73 of 83

30 Mar 2023 14:39:59,036 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-010.raw in QC folder. 74 of 83

30 Mar 2023 14:39:59,037 INFO : 95% Done

30 Mar 2023 14:39:59,042 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_008.raw in QC folder. 75 of 83

30 Mar 2023 14:39:59,047 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-001.raw in QC folder. 76 of 83

30 Mar 2023 14:39:59,048 INFO : 96% Done

30 Mar 2023 14:39:59,053 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20230128_QC_BSA_012.raw in QC folder. 77 of 83

30 Mar 2023 14:39:59,058 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221122_QC_BSA_002.raw in QC folder. 78 of 83

30 Mar 2023 14:39:59,063 DEBUG: Updating previously imported data for sample file D:\METRIC\QC\BSA\20221101-QC_BSA-005 - Copy.raw in QC folder. 79 of 83

30 Mar 2023 14:39:59,064 INFO : 97% Done

30 Mar 2023 14:39:59,069 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20221011-QC_BSA-005.raw in QC folder. 80 of 83

30 Mar 2023 14:39:59,074 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220916-QC_BSA-005.raw in QC folder. 81 of 83

30 Mar 2023 14:39:59,079 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220817-QC_BSA-001.raw in QC folder. 82 of 83

30 Mar 2023 14:39:59,080 INFO : 98% Done

30 Mar 2023 14:39:59,085 DEBUG: Updating previously imported data for sample file D:\QC\QC_RAW_Files\20220902-QC_BSA-004.raw in QC folder. 83 of 83

30 Mar 2023 14:39:59,085 INFO : Done updating previously imported sample file data.

30 Mar 2023 14:39:59,632 INFO : All the related sampleFiles for /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-12.sky.zip have been updated with newer data.

30 Mar 2023 14:39:59,632 INFO : Deleting /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-12.sky.zip

30 Mar 2023 14:39:59,632 INFO : Deleting directory /data/labkey/files/NCSU - METRIC/METRIC Internal/METRIC QC/Eclipse_Polk/@files/METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-12

30 Mar 2023 14:39:59,632 INFO : Creating and populating temp tables for Proportion values

30 Mar 2023 14:39:59,692 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

30 Mar 2023 14:39:59,713 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

30 Mar 2023 14:39:59,727 INFO : Cleaning up temp tables

30 Mar 2023 14:39:59,970 INFO : Completed import of Skyline document from METRIC_Exploris_Tox_All_QCs_2023-03-30_17-39-43.sky.zip

30 Mar 2023 14:39:59,972 INFO : 100% Done

30 Mar 2023 14:39:59,995 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'