11 Sep 2025 13:36:41,413 DEBUG: Resetting Job ID: eabb8123-717c-103e-8e6e-1cc91aa98000

11 Sep 2025 13:36:41,427 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

11 Sep 2025 13:36:41,428 INFO : Starting to import Skyline document from IAA_peptides_2025-09-11_13-36-33.sky.zip

11 Sep 2025 13:36:41,428 INFO : Expanding IAA_peptides.skyd

11 Sep 2025 13:36:41,442 INFO : Expanding IAA_peptides.sky.view

11 Sep 2025 13:36:41,443 INFO : Expanding IAA_peptides.sky

11 Sep 2025 13:36:41,446 INFO : Reading Skyline file, IAA_peptides.sky, to determine if the TransitionChromInfos in the document should be stored...

11 Sep 2025 13:36:41,450 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored

11 Sep 2025 13:36:41,450 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1

11 Sep 2025 13:36:41,453 INFO : 6% Done

11 Sep 2025 13:36:41,453 INFO : Copying SKYD to temp directory for import purposes

11 Sep 2025 13:36:41,457 INFO : Copying complete

11 Sep 2025 13:36:41,458 DEBUG: Starting to load chromatogram headers

11 Sep 2025 13:36:41,458 DEBUG: Done loading chromatogram headers

11 Sep 2025 13:36:41,632 INFO : Inserting ProINS

11 Sep 2025 13:36:41,635 INFO : 12% Done

11 Sep 2025 13:36:41,656 INFO : 18% Done

11 Sep 2025 13:36:41,676 INFO : 24% Done

11 Sep 2025 13:36:41,698 INFO : 34% Done

11 Sep 2025 13:36:41,724 DEBUG: Total molecules inserted: 4

11 Sep 2025 13:36:41,724 INFO : Inserting ProINS Heavy

11 Sep 2025 13:36:41,726 INFO : 39% Done

11 Sep 2025 13:36:41,747 INFO : 46% Done

11 Sep 2025 13:36:41,766 INFO : 55% Done

11 Sep 2025 13:36:41,795 DEBUG: Total molecules inserted: 3

11 Sep 2025 13:36:41,795 INFO : Inserting ProINS

11 Sep 2025 13:36:41,798 INFO : 62% Done

11 Sep 2025 13:36:41,836 INFO : 70% Done

11 Sep 2025 13:36:41,872 DEBUG: Total peptides inserted: 2

11 Sep 2025 13:36:41,872 INFO : Inserting babyRGF

11 Sep 2025 13:36:41,875 INFO : 80% Done

11 Sep 2025 13:36:41,903 DEBUG: Total peptides inserted: 1

11 Sep 2025 13:36:41,903 INFO : Done parsing Skyline document.

11 Sep 2025 13:36:41,964 INFO : No group comparisons found.

11 Sep 2025 13:36:41,964 INFO : Calculating calibration curves

11 Sep 2025 13:36:41,964 DEBUG: Calculating calibration curve for ProINS, 1 of 4

11 Sep 2025 13:36:41,988 INFO : 85% Done

11 Sep 2025 13:36:41,988 DEBUG: Calculating calibration curve for ProINS Heavy, 2 of 4

11 Sep 2025 13:36:42,005 INFO : 89% Done

11 Sep 2025 13:36:42,005 DEBUG: Calculating calibration curve for ProINS, 3 of 4

11 Sep 2025 13:36:42,023 INFO : 94% Done

11 Sep 2025 13:36:42,023 DEBUG: Calculating calibration curve for babyRGF, 4 of 4

11 Sep 2025 13:36:42,031 INFO : 98% Done

11 Sep 2025 13:36:42,033 INFO : Done calculating calibration curves.

11 Sep 2025 13:36:42,033 INFO : Creating and populating temp tables for Proportion values

11 Sep 2025 13:36:42,037 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

11 Sep 2025 13:36:42,053 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

11 Sep 2025 13:36:42,062 INFO : Cleaning up temp tables

11 Sep 2025 13:36:42,306 INFO : Deleted temp copy of SKYD file

11 Sep 2025 13:36:42,306 INFO : Completed import of Skyline document from IAA_peptides_2025-09-11_13-36-33.sky.zip

11 Sep 2025 13:36:42,308 INFO : 100% Done

11 Sep 2025 13:36:42,533 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'