Tulane U Biochem Hu Lab - p24 CFP10 immuno-enrichment MS detection

Sensitive detection of HIV-1 and Mycobacterium tuberculosis peptides in blood for rapid diagnosis of co-infected individuals by immuno-affinity liquid chromatography tandem mass spectrometry
Data License: CC BY 4.0 | ProteomeXchange: PXD043191 | doi: https://doi.org/10.6069/q23b-jg05
  • Organism: Homo sapiens
  • Instrument: TSQ Altis
  • SpikeIn: Yes
  • Keywords: HIV-1; Mycobacterium tuberculosis; p24; CFP10; mass spectrometry
  • Lab head: Tony Hu Submitter: Lin Li
Abstract
We describe a blood-based immuno-affinity liquid chromatography tandem mass spectrometry (ILM) assay that quantifies proteotypic peptides derived from the Mtb virulence factor CFP10 and the HIV-1 capsid protein p24 to simultaneously diagnose HIV-1 infection and TB disease and to monitor their real-time response to treatment.
Experiment Description
An immuno-affinity liquid chromatography tandem mass spectrometry (ILM) assay was developed and validated to quantify single peptides derived from HIV-1 p24 and M. tuberculosis (Mtb) CFP10 proteins in trypsin-digested serum derived from cryopreserved serum archives of cohorts of adults and children with/without HIV and TB.
Sample Description
Cryopreserved plasma samples from adults with active TB disease (AFB-culture and/or GeneXpert confirmed) including individuals with HIV, and their household contacts (asymptomatic without evidence of TB disease) enrolled in the TB Aerobiology, Infectiousness, and Transmission (TBAIT) cohort in Kenya were selected based on sufficient sample volume and different clinical symptoms for inclusion in this pilot evaluation. Cryopreserved serum samples from children TB/HIV-1 participants and their controls were obtained from the sample archive of the IMPAACT P1041 study, a multi-center Phase II-III randomized double-blind placebo-controlled trial that evaluated primary isoniazid (INH) prophylaxis in bacille Calmette-Guérin (BCG) vaccinated, 3- to 4-month-old children with perinatal HIV-1 exposure in southern Africa between 2004 and 2008
Created on 6/21/23, 8:59 PM
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CFP10 longitudinal samples_2023-06-21_08-46-50.sky.zip2023-06-21 20:59:03224281321 
p24 500fM data_2023-06-18_13-13-06.sky.zip2023-06-21 20:59:0322428421 
p24 longitudinal patients_2023-06-15_19-38-46.sky.zip2023-06-21 20:59:03224281327 
commercial HIV-1 samples_2023-06-15_19-37-00.sky.zip2023-06-21 20:59:03224282827p24 longitudinal patients_2023-06-15_19-38-46.sky.zip
TBAIT p24_2023-06-15_19-36-11.sky.zip2023-06-21 20:59:03224283427commercial HIV-1 samples_2023-06-15_19-37-00.sky.zip
TBAIT CFP10_2023-06-15_19-35-32.sky.zip2023-06-21 20:59:03224283427TBAIT p24_2023-06-15_19-36-11.sky.zip
P1041 p24 results_2023-06-15_19-33-02.sky.zip2023-06-21 20:59:03224281727TBAIT CFP10_2023-06-15_19-35-32.sky.zip
P1041 CFP10 results_2023-06-15_19-32-21.sky.zip2023-06-21 20:59:03224281727P1041 p24 results_2023-06-15_19-33-02.sky.zip
CFP10 8fM_2023-06-15_19-30-47.sky.zip2023-06-21 20:59:0322428327P1041 CFP10 results_2023-06-15_19-32-21.sky.zip
p24 cut-off_2023-06-15_19-27-27.sky.zip2023-06-21 20:59:032242812215 
CFP10 cut-off_2023-06-15_19-26-29.sky.zip2023-06-21 20:59:032242812215p24 cut-off_2023-06-15_19-27-27.sky.zip
CFP10 and p24 mAb precipitation rate_2023-06-15_19-25-10.sky.zip2023-06-21 20:59:032242812215CFP10 cut-off_2023-06-15_19-26-29.sky.zip
p24 interference_2023-06-15_19-23-48.sky.zip2023-06-21 20:59:032242815215CFP10 and p24 mAb precipitation rate_2023-06-15_19-25-10.sky.zip
CFP10 interference_2023-06-15_19-22-53.sky.zip2023-06-21 20:59:032242815215p24 interference_2023-06-15_19-23-48.sky.zip
p24 LLMI_2023-06-15_19-21-50.sky.zip2023-06-21 20:59:032242815215CFP10 interference_2023-06-15_19-22-53.sky.zip
CFP10 LLMI_2023-06-15_19-20-40.sky.zip2023-06-21 20:59:032242815215p24 LLMI_2023-06-15_19-21-50.sky.zip
p24 recovery_2023-06-15_19-18-51.sky.zip2023-06-21 20:59:032242812215CFP10 LLMI_2023-06-15_19-20-40.sky.zip
CFP10 recovery_2023-06-15_19-15-41.sky.zip2023-06-21 20:59:032242812215p24 recovery_2023-06-15_19-18-51.sky.zip
p24 carryover_2023-06-15_19-14-38.sky.zip2023-06-21 20:59:03224286215CFP10 recovery_2023-06-15_19-15-41.sky.zip
CFP10 carryover_2023-06-15_19-13-50.sky.zip2023-06-21 20:59:03224286215p24 carryover_2023-06-15_19-14-38.sky.zip
p24 imprecision_2023-06-15_19-12-45.sky.zip2023-06-21 20:59:032242830215CFP10 carryover_2023-06-15_19-13-50.sky.zip
CFP10 imprecision_2023-06-15_19-11-54.sky.zip2023-06-21 20:59:032242830215p24 imprecision_2023-06-15_19-12-45.sky.zip
p24 calibration_2023-06-15_19-11-13.sky.zip2023-06-21 20:59:03224288215CFP10 imprecision_2023-06-15_19-11-54.sky.zip
CFP10 linearity_2023-06-15_19-10-18.sky.zip2023-06-21 20:59:03224288215p24 calibration_2023-06-15_19-11-13.sky.zip