tr|Q5LXC5|Q5LXC5_RUEPO: /Panorama Public/2016/Nunn - Detection of Low Abundance Ocean Bacteria Peptides

tr|Q5LXC5|Q5LXC5_RUEPO

Nunn - Detection of Low Abundance Ocean Bacteria Peptides

Protein

File	Detection of Low Abundance Ocean Bacteria Peptides DIA_2016-08-08_14-19-56.sky.zip 23 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=sucD PE=3 SV=1
Decoy	false
Accession	Q5LXC5
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
1										11										21										31										41										51										61										71										81										91
M	A	V	L	I	D	E	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	K	G	G	M	E	H	L	G	L	P	V	F	N	S	V	H	E	A	K	H	V	T	E	A	N	A	T	V	I	Y	V	P	P	P	F	A	A	D	S	I	L	E	A	I	D	A	Q	M	E	V	I	V	C	I	T	E	G	I


101										111										121										131										141										151										161										171										181										191
P	V	L	D	M	M	K	V	K	R	A	L	E	G	S	S	S	R	L	I	G	P	N	C	P	G	V	I	T	P	D	A	C	K	I	G	I	M	P	G	H	I	H	K	R	G	S	V	G	V	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	S	D	I	G	L	G	Q	S	T	A	V	G	I	G	G	D	P	I	K	G	T	E	H	I	D	V	L	E	W	F	L	A	D	D	E
																		1																																													2

201										211										221										231										241										251										261										271										281										291
T	E	S	I	I	M	I	G	E	I	G	G	S	A	E	E	E	A	A	Q	F	L	K	D	E	A	K	K	G	R	K	K	P	V	A	G	F	I	A	G	R	T	A	P	P	G	R	R	M	G	H	A	G	A	I	V	A	G	G	K	G	G	A	E	D	K	I	E	A	M	R	S	A	G	I	V	V	A	D	S	P	A	T	L	G	E	A	V	L	E	A	I	G	K
																															3

Intensity

(Log 10 base)

Features

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Active site

Binding site

Domain

Annotations for tr|Q5LXC5|Q5LXC5_RUEPO

Description	Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=sucD PE=3 SV=1
Gene name	sucD
Organism	Unknown unknown

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories
none loaded	none loaded	Q5LXC5	Q5LXC5_RUEPO	none loaded	none loaded	none loaded

Peptides

Select All Select None Show Selected Show Unselected Show All	Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Avg. Measured RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Predicted RT Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	RT Score Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
	LIGPNCPGVITPDACK	1710.8433	0	39.8206
	QTSDIGLGQSTAVGIGGDPIK	2013.0378	0	44.0482
	KPVAGFIAGR	1014.5974	0	32.0874

Chromatograms

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Summary Charts

Peak Areas

Retention Times