Protein / LabelDescriptionProtein Note/Annotations 
sp|Q5LNP1|ATPB_RUEPO ATP synthase subunit beta OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=atpD PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
AIHQPAPSFDEQSTSSDILVTGIK02540.2758 AIHQPAPSFDEQSTSSDILVTGIKlight3+847.76592540.2758534.4961 
IPSAVGYQPTLATDMGAMQER02235.0664 IPSAVGYQPTLATDMGAMQERlight3+746.02942235.0664530.6301 
AISELGIYPAVDPLDSSSR01989.0055 AISELGIYPAVDPLDSSSRlight3+664.00911989.0055527.5133 
sp|Q5LMR5|EFTU_RUEPO Elongation factor Tu OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=tuf1 PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
GITISTAHVEYETDSR01777.8483 GITISTAHVEYETDSRlight2+889.93141777.8483529.6029 
VDQVDDEELLELVEMEIR02173.0460 VDQVDDEELLELVEMEIRlight3+725.35602173.0460529.8445 
ALMAAVDEYIPTPAR01616.8232 ALMAAVDEYIPTPARlight2+809.41891616.8232527.1876 
sp|Q5LU99|HIS6_RUEPO Imidazole glycerol phosphate synthase subunit HisF OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=hisF PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
AYDAAGADEICFLDIHATHENR02488.1077 AYDAAGADEICFLDIHATHENRlight3+830.37652488.1077533.8353 
VSFNSAAVANPDVIAEAADR02015.9912 VSFNSAAVANPDVIAEAADRlight3+673.00442015.9912527.8552 
KPTGIDAVEFAR01302.6932 KPTGIDAVEFARlight2+652.35391302.6932522.4756 
sp|Q5LSU1|LPXB_RUEPO Lipid-A-disaccharide synthase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=lpxB PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
TELGLGAAPVLLALPGSR01734.0040 TELGLGAAPVLLALPGSRlight2+868.00931734.0040528.9453 
LAPVFGAALR01013.6022 LAPVFGAALRlight2+507.80841013.6022418.1393 
LAAVHADPAAQDAAMR01606.7886 LAAVHADPAAQDAAMRlight2+804.40161606.7886427.0370 
sp|Q5LN23|PNP_RUEPO Polyribonucleotide nucleotidyltransferase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=pnp PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
SMQWGEETLTLESGK01694.7822 SMQWGEETLTLESGKlight2+848.39841694.7822528.3570 
VGYVDGEYVLNPTVDDMQDLR02397.1158 VGYVDGEYVLNPTVDDMQDLRlight3+800.04592397.1158532.6827 
LDLVVAGTK0914.5437 LDLVVAGTKlight2+458.2791914.5437416.6534 
tr|Q5LQQ3|Q5LQQ3_RUEPO Fumarylacetoacetate hydrolase family protein OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO2435 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
DLSAHVPDLSGAAVSIEALDALR02319.2070 DLSAHVPDLSGAAVSIEALDALRlight3+774.07632319.2070531.6959 
AIDPATLPLVADPGR01504.8249 AIDPATLPLVADPGRlight2+753.41971504.8249525.5076 
TTSCLSGPNDPVIIPR01725.8720 TTSCLSGPNDPVIIPRlight2+863.94331725.8720528.8233 
tr|Q5LUX0|Q5LUX0_RUEPO Methylmalonyl-CoA epimerase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO0932 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
LNHVAIAVPDLEAASAQYR02037.0643 LNHVAIAVPDLEAASAQYRlight3+680.02872037.0643528.1221 
VGAPQDEPDHGVTVVFIELPNTK02461.2489 VGAPQDEPDHGVTVVFIELPNTKlight3+821.42362461.2489533.4951 
IELLYPLGENSPIQGFLDK02145.1358 IELLYPLGENSPIQGFLDKlight3+716.05252145.1358529.4910 
tr|Q5LSB9|Q5LSB9_RUEPO Branched-chain amino acid ABC transporter, ATP-binding protein OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO1849 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
STVFNLISR01035.5713 STVFNLISRlight2+518.79291035.5713418.4688 
TNLFSEIFFTPSAR01628.8199 TNLFSEIFFTPSARlight2+815.41721628.8199427.3675 
VLAMADGAK0874.4582 VLAMADGAKlight2+438.2364874.4582416.0521 
tr|Q5LRJ4|Q5LRJ4_RUEPO Outer membrane protein, putative OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO2133 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
FVMGGELEYDR01314.5914 FVMGGELEYDRlight2+658.30301314.5914522.6541 
VNNDLGAGGGTLDEIGR01656.8067 VNNDLGAGGGTLDEIGRlight2+829.41061656.8067527.7873 
AGYDFGPVLGYGVLGAAR01781.9101 AGYDFGPVLGYGVLGAARlight2+891.96231781.9101529.6639 
tr|Q5LU48|Q5LU48_RUEPO Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO1210 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
MMSFVESLEATDDK01601.6953 MMSFVESLEATDDKlight2+801.85491601.6953526.9606 
VASTPSSEQIADYTGSGPFVFR02315.1070 VASTPSSEQIADYTGSGPFVFRlight3+772.70962315.1070531.6440 
AAMTNNVSGLLQTGAAVFWNLEK02434.2315 AAMTNNVSGLLQTGAAVFWNLEKlight3+812.41782434.2315533.1529 
tr|Q5LX27|Q5LX27_RUEPO Alcohol dehydrogenase, zinc-containing OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO0231 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
ACLDLGAER01003.4757 ACLDLGAERlight2+502.74511003.4757417.9874 
LTLTGSTLRPQSDLAK01699.9468 LTLTGSTLRPQSDLAKlight2+850.98071699.9468528.4344 
IAPVMDSEFDLGDAAAAHAR02055.9684 IAPVMDSEFDLGDAAAAHARlight3+686.33012055.9684528.3615 
tr|Q5LVD5|Q5LVD5_RUEPO Methyltransferase, FkbM family OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO0767 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
SVAAECLGVK01032.5274 SVAAECLGVKlight2+517.27101032.5274418.4231 
YEGQEIAGALHVTGPK01668.8471 YEGQEIAGALHVTGPKlight2+835.43081668.8471527.9679 
GILNAAGFEK01018.5447 GILNAAGFEKlight2+510.27961018.5447518.2134 
tr|Q5LP17|Q5LP17_RUEPO Aspartokinase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO3035 PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
SWQGWQVPLMTNSAHSQAR02183.0331 SWQGWQVPLMTNSAHSQARlight3+728.68502183.0331529.9710 
DAGELEFEDLLVDYDVCK02128.9511 DAGELEFEDLLVDYDVCKlight3+710.65762128.9511529.2860 
YMELAVQALHDAFELDK01991.9663 YMELAVQALHDAFELDKlight3+664.99601991.9663527.5508 
tr|Q5LRU3|Q5LRU3_RUEPO GTP-binding protein TypA OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=typA PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
DGTQIESFR01051.4934 DGTQIESFRlight2+526.75401051.4934418.7076 
GELQMGVLIENMR01488.7429 GELQMGVLIENMRlight2+745.37871488.7429525.2664 
MFIGPQTDVYEGMIIGEHSR02279.0715 MFIGPQTDVYEGMIIGEHSRlight3+760.69782279.0715531.1875 
tr|Q5LQB9|Q5LQB9_RUEPO Bacterial extracellular solute-binding protein, family 7 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO2573 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
TYYTAGFHEPGAGLSVATNR02111.0072 TYYTAGFHEPGAGLSVATNRlight3+704.67632111.0072529.0587 
EVFESLSPAHQK01370.6830 EVFESLSPAHQKlight2+686.34881370.6830523.4955 
ASQDVMAENMGDELFK01783.7757 ASQDVMAENMGDELFKlight2+892.89511783.7757529.6919 
tr|Q5LPJ5|Q5LPJ5_RUEPO Cobalt chelatase, CobS subunit OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO2853 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
QVTEFHEGILPWALR01794.9417 QVTEFHEGILPWALRlight2+898.47811794.9417529.8593 
QVSQMVTVADLTR01446.7501 QVSQMVTVADLTRlight2+724.38231446.7501524.6365 
TVINWAQNAEIFR01560.8049 TVINWAQNAEIFRlight2+781.40971560.8049526.3473 
tr|Q5LXC5|Q5LXC5_RUEPO Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=sucD PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
LIGPNCPGVITPDACK01710.8433 LIGPNCPGVITPDACKlight2+856.42891710.8433528.5979 
QTSDIGLGQSTAVGIGGDPIK02013.0378 QTSDIGLGQSTAVGIGGDPIKlight3+672.01992013.0378527.8178 
KPVAGFIAGR01014.5974 KPVAGFIAGRlight2+508.30601014.5974518.1542 
tr|Q5LR88|Q5LR88_RUEPO Pyruvate dehydrogenase complex, E1 component, beta subunit OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=pdhB PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
ISQGMLDEFGSK01310.6177 ISQGMLDEFGSKlight2+656.31611310.6177522.5945 
SFDVPQIDDLAIPFGK01760.8985 SFDVPQIDDLAIPFGKlight2+881.45651760.8985529.3487 
LATDGISAEVIDLR01471.7882 LATDGISAEVIDLRlight2+736.90141471.7882525.0120 
tr|Q5LKD7|Q5LKD7_RUEPO Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=fabA PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
GELFGPGNAQLPAPPMLMMDR02241.0745 GELFGPGNAQLPAPPMLMMDRlight3+748.03212241.0745530.7062 
ITEVSADGGAHGK01240.6048 ITEVSADGGAHGKlight3+414.54221240.6048518.0336 
GYALGVGEVK0991.5338 GYALGVGEVKlight2+496.7742991.5338517.8082 
tr|Q5LSK5|Q5LSK5_RUEPO 6,7-dimethyl-8-ribityllumazine synthase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=ribH-2 PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
QSNFDGYVALGCVIR01697.8195 QSNFDGYVALGCVIRlight2+849.91701697.8195528.4025 
GETTHYDTVCNDSSR01740.7009 GETTHYDTVCNDSSRlight2+871.35771740.7009529.0457 
GGGAAAAALHLIALGR01417.8154 GGGAAAAALHLIALGRlight2+709.91501417.8154524.2024 
tr|Q5LV09|Q5LV09_RUEPO N5-carboxyaminoimidazole ribonucleotide mutase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=purE PE=3 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
VGIIMGSQSDWPTMK01648.7953 VGIIMGSQSDWPTMKlight2+825.40491648.7953527.6671 
GLQVIIAGAGGAAHLPGMMASK02049.0863 GLQVIIAGAGGAAHLPGMMASKlight3+684.03612049.0863528.2744 
ALSGVDSLYSIVQMPK01706.8913 ALSGVDSLYSIVQMPKlight2+854.45291706.8913528.5386 
tr|Q5LTN8|Q5LTN8_RUEPO Transcriptional regulator, GntR family OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO1375 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
LVESELAER01044.5451 LVESELAERlight2+523.27981044.5451418.6034 
YLVQQLDLVHR01382.7670 YLVQQLDLVHRlight2+692.39081382.7670523.6767 
GIVEAIAAR0898.5236 GIVEAIAARlight2+450.2691898.5236416.4131 
tr|Q5LPY0|Q5LPY0_RUEPO Type I secretion target repeat protein OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=SPO2716 PE=4 SV=1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
ALADVDGATITGGDK01402.6940 ALADVDGATITGGDKlight2+702.35431402.6940523.9756 
LTNLSNYDLVVNR01519.7995 LTNLSNYDLVVNRlight2+760.90701519.7995525.7322 
ILNTGGDILTEGAVIR01640.9097 ILNTGGDILTEGAVIRlight2+821.46211640.9097527.5489