Name: JL0005-Plasma-Proteomics_2015-08-07_14-47-08.sky.zip (24 MB)   1 version
 
54 proteins, 142 peptides, 143 precursors, 701 transitions  -  18 replicates  -  Skyline (64-bit) 3.1.0.7382
Protein / LabelDescriptionProtein Annotations 
G3N556 Proteasome subunit alpha type-5 / Macropain zeta
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
ITSPLMEPNSIEK01457.74362ITSPLMEPNSIEKlight1457.7436729.87912+y101157.58711+
ITSPLMEPNSIEK01457.74362ITSPLMEPNSIEKlight1457.7436729.87912+y91060.53431+
ITSPLMEPNSIEK01457.74362ITSPLMEPNSIEKlight1457.7436729.87912+y8947.45031+
ITSPLMEPNSIEK01457.74362ITSPLMEPNSIEKlight1457.7436729.87912+y7816.40981+
ITSPLMEPNSIEK01457.74362ITSPLMEPNSIEKlight1457.7436729.87912+y6687.36721+
AIGSASEGAQSSLQEVYHK01960.94903AIGSASEGAQSSLQEVYHKlight1960.9490654.65703+y91090.55281+
AIGSASEGAQSSLQEVYHK01960.94903AIGSASEGAQSSLQEVYHKlight1960.9490654.65703+y81003.52071+
AIGSASEGAQSSLQEVYHK01960.94903AIGSASEGAQSSLQEVYHKlight1960.9490654.65703+y6803.40461+
AIGSASEGAQSSLQEVYHK01960.94903AIGSASEGAQSSLQEVYHKlight1960.9490654.65703+y3447.23501+
AIGSASEGAQSSLQEVYHK01960.94903AIGSASEGAQSSLQEVYHKlight1960.9490654.65703+y2284.17171+
LNATNIELATVEPGK01568.84101LNATNIELATVEPGKlight1568.8410785.42782+y9943.50951+
LNATNIELATVEPGK01568.84101LNATNIELATVEPGKlight1568.8410785.42782+y7701.38281+
LNATNIELATVEPGK01568.84101LNATNIELATVEPGKlight1568.8410785.42782+y4430.22961+
LNATNIELATVEPGK01568.84101LNATNIELATVEPGKlight1568.8410785.42782+y3301.18701+
G3N8J1 Histone H4
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
ISGLIYEETR01179.61362ISGLIYEETRlight1179.6136590.81412+y91067.53681+
ISGLIYEETR01179.61362ISGLIYEETRlight1179.6136590.81412+y8980.50471+
ISGLIYEETR01179.61362ISGLIYEETRlight1179.6136590.81412+y6810.39921+
ISGLIYEETR01179.61362ISGLIYEETRlight1179.6136590.81412+y5697.31511+
ISGLIYEETR01179.61362ISGLIYEETRlight1179.6136590.81412+y2276.16661+
VFLENVIR0988.57061VFLENVIRlight988.5706495.29262+y7890.50941+
VFLENVIR0988.57061VFLENVIRlight988.5706495.29262+y6743.44101+
VFLENVIR0988.57061VFLENVIRlight988.5706495.29262+y5630.35691+
VFLENVIR0988.57061VFLENVIRlight988.5706495.29262+y4501.31441+
VFLENVIR0988.57061VFLENVIRlight988.5706495.29262+y1175.11901+
DAVTYTEHAK01133.53533DAVTYTEHAKlight1133.5353567.77492+y7849.41011+
DAVTYTEHAK01133.53533DAVTYTEHAKlight1133.5353567.77492+y6748.36241+
DAVTYTEHAK01133.53533DAVTYTEHAKlight1133.5353567.77492+y5585.29911+
DAVTYTEHAK01133.53533DAVTYTEHAKlight1133.5353567.77492+y4484.25141+
DAVTYTEHAK01133.53533DAVTYTEHAKlight1133.5353567.77492+y3355.20881+
G3NCX3 Apolipoprotein A-IV
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
LTNPLWTQVAPLTQELMSK02169.15043LTNPLWTQVAPLTQELMSKlight2169.1504724.05743+y101117.59221+
LTNPLWTQVAPLTQELMSK02169.15043LTNPLWTQVAPLTQELMSKlight2169.1504724.05743+y91046.55511+
LTNPLWTQVAPLTQELMSK02169.15043LTNPLWTQVAPLTQELMSKlight2169.1504724.05743+y8949.50231+
LTNPLWTQVAPLTQELMSK02169.15043LTNPLWTQVAPLTQELMSKlight2169.1504724.05743+y7836.41821+
LTNPLWTQVAPLTQELMSK02169.15043LTNPLWTQVAPLTQELMSKlight2169.1504724.05743+y3365.18531+
FTQEAEQLK01092.54511FTQEAEQLKlight1092.5451547.27982+y7845.43631+
FTQEAEQLK01092.54511FTQEAEQLKlight1092.5451547.27982+y6717.37771+
FTQEAEQLK01092.54511FTQEAEQLKlight1092.5451547.27982+y5588.33521+
FTQEAEQLK01092.54511FTQEAEQLKlight1092.5451547.27982+y3388.25541+
FTQEAEQLK01092.54511FTQEAEQLKlight1092.5451547.27982+y2260.19691+
LEIDGQNLK01028.55022LEIDGQNLKlight1028.5502515.28242+y7787.43081+
LEIDGQNLK01028.55022LEIDGQNLKlight1028.5502515.28242+y6674.34681+
LEIDGQNLK01028.55022LEIDGQNLKlight1028.5502515.28242+y5559.31981+
LEIDGQNLK01028.55022LEIDGQNLKlight1028.5502515.28242+y3374.23981+
LEIDGQNLK01028.55022LEIDGQNLKlight1028.5502515.28242+y2260.19691+
G3NGP2 Tumor protein D52
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
VEDEILTLSQVLAAK01627.90331VEDEILTLSQVLAAKlight1627.9033814.95892+y101043.64591+
VEDEILTLSQVLAAK01627.90331VEDEILTLSQVLAAKlight1627.9033814.95892+y9930.56191+
VEDEILTLSQVLAAK01627.90331VEDEILTLSQVLAAKlight1627.9033814.95892+y7716.43011+
VEDEILTLSQVLAAK01627.90331VEDEILTLSQVLAAKlight1627.9033814.95892+y4402.27111+
VEDEILTLSQVLAAK01627.90331VEDEILTLSQVLAAKlight1627.9033814.95892+y3289.18701+
TSETLSQASLK01163.60342TSETLSQASLKlight1163.6034582.80902+y8847.48841+
TSETLSQASLK01163.60342TSETLSQASLKlight1163.6034582.80902+y7746.44071+
TSETLSQASLK01163.60342TSETLSQASLKlight1163.6034582.80902+y6633.35661+
TSETLSQASLK01163.60342TSETLSQASLKlight1163.6034582.80902+y4418.26601+
TSETLSQASLK01163.60342TSETLSQASLKlight1163.6034582.80902+y2260.19691+
ATAAFSNVGSAITR01364.70483ATAAFSNVGSAITRlight1364.7048683.35972+y101051.55311+
ATAAFSNVGSAITR01364.70483ATAAFSNVGSAITRlight1364.7048683.35972+y9904.48471+
ATAAFSNVGSAITR01364.70483ATAAFSNVGSAITRlight1364.7048683.35972+y8817.45261+
ATAAFSNVGSAITR01364.70483ATAAFSNVGSAITRlight1364.7048683.35972+y7703.40971+
ATAAFSNVGSAITR01364.70483ATAAFSNVGSAITRlight1364.7048683.35972+y6604.34131+
G3NNC7 Porphobilinogen deaminase
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
TLETLPESSVIGTSSLR01788.94691TLETLPESSVIGTSSLRlight1788.9469895.48072+y121232.64811+
TLETLPESSVIGTSSLR01788.94691TLETLPESSVIGTSSLRlight1788.9469895.48072+y101006.55271+
TLETLPESSVIGTSSLR01788.94691TLETLPESSVIGTSSLRlight1788.9469895.48072+y7733.42031+
TLETLPESSVIGTSSLR01788.94691TLETLPESSVIGTSSLRlight1788.9469895.48072+y6620.33621+
DDYAAIVLAAAGLR01417.75653DDYAAIVLAAAGLRlight1417.7565709.88552+y10954.60951+
DDYAAIVLAAAGLR01417.75653DDYAAIVLAAAGLRlight1417.7565709.88552+y9883.57241+
DDYAAIVLAAAGLR01417.75653DDYAAIVLAAAGLRlight1417.7565709.88552+y8770.48831+
DDYAAIVLAAAGLR01417.75653DDYAAIVLAAAGLRlight1417.7565709.88552+y7671.41991+
DDYAAIVLAAAGLR01417.75653DDYAAIVLAAAGLRlight1417.7565709.88552+y6558.33581+
LGEDLANLLLSK01284.72892LGEDLANLLLSKlight1284.7289643.37172+y111172.65211+
LGEDLANLLLSK01284.72892LGEDLANLLLSKlight1284.7289643.37172+y7758.47711+
LGEDLANLLLSK01284.72892LGEDLANLLLSKlight1284.7289643.37172+y4460.31301+
LGEDLANLLLSK01284.72892LGEDLANLLLSKlight1284.7289643.37172+y3347.22891+
LGEDLANLLLSK01284.72892LGEDLANLLLSKlight1284.7289643.37172+y2234.14481+
G3NX24 MARCKS-like protein 1
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
EGENGTGDAIEPAPAAEGEAATPEGAK02538.13581EGENGTGDAIEPAPAAEGEAATPEGAKlight2538.1358847.05253+y141298.62231+
EGENGTGDAIEPAPAAEGEAATPEGAK02538.13581EGENGTGDAIEPAPAAEGEAATPEGAKlight2538.1358847.05253+y10930.45271+
EGENGTGDAIEPAPAAEGEAATPEGAK02538.13581EGENGTGDAIEPAPAAEGEAATPEGAKlight2538.1358847.05253+y8744.38861+
EGENGTGDAIEPAPAAEGEAATPEGAK02538.13581EGENGTGDAIEPAPAAEGEAATPEGAKlight2538.1358847.05253+y6602.31441+
EGENGTGDAIEPAPAAEGEAATPEGAK02538.13581EGENGTGDAIEPAPAAEGEAATPEGAKlight2538.1358847.05253+y5501.26671+
G3NC06 Proteasome activator complex subunit 1 / Proteasome activator 28 alpha
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
IEELQVLLK01083.65402IEELQVLLKlight1083.6540542.83432+y7842.53461+
IEELQVLLK01083.65402IEELQVLLKlight1083.6540542.83432+y6713.49201+
IEELQVLLK01083.65402IEELQVLLKlight1083.6540542.83432+y4472.34931+
IEELQVLLK01083.65402IEELQVLLKlight1083.6540542.83432+y3373.28091+
IEELQVLLK01083.65402IEELQVLLKlight1083.6540542.83432+y2260.19691+
TSFSCDNLASLK01341.62351TSFSCDNLASLKlight1341.6235671.81902+y91007.48261+
TSFSCDNLASLK01341.62351TSFSCDNLASLKlight1341.6235671.81902+y8920.45061+
TSFSCDNLASLK01341.62351TSFSCDNLASLKlight1341.6235671.81902+y7760.41991+
TSFSCDNLASLK01341.62351TSFSCDNLASLKlight1341.6235671.81902+y4418.26601+
TSFSCDNLASLK01341.62351TSFSCDNLASLKlight1341.6235671.81902+y3347.22891+
IEGFQTQISK01149.60303IEGFQTQISKlight1149.6030575.80882+y91037.52621+
IEGFQTQISK01149.60303IEGFQTQISKlight1149.6030575.80882+y8908.48361+
IEGFQTQISK01149.60303IEGFQTQISKlight1149.6030575.80882+y6704.39371+
IEGFQTQISK01149.60303IEGFQTQISKlight1149.6030575.80882+y5576.33521+
IEGFQTQISK01149.60303IEGFQTQISKlight1149.6030575.80882+y2234.14481+
G3NCV4 Cholesteryl ester transfer protein
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
LTYPAAVVLNEK01316.73403LTYPAAVVLNEKlight1316.7340659.37432+y9940.54621+
LTYPAAVVLNEK01316.73403LTYPAAVVLNEKlight1316.7340659.37432+y8843.49341+
LTYPAAVVLNEK01316.73403LTYPAAVVLNEKlight1316.7340659.37432+y7772.45631+
LTYPAAVVLNEK01316.73403LTYPAAVVLNEKlight1316.7340659.37432+y5602.35081+
LTYPAAVVLNEK01316.73403LTYPAAVVLNEKlight1316.7340659.37432+y4503.28241+
VANILADFIQDR01373.73031VANILADFIQDRlight1373.7303687.87242+y8977.50511+
VANILADFIQDR01373.73031VANILADFIQDRlight1373.7303687.87242+y7864.42101+
VANILADFIQDR01373.73031VANILADFIQDRlight1373.7303687.87242+y6793.38391+
VANILADFIQDR01373.73031VANILADFIQDRlight1373.7303687.87242+y5678.35691+
ECLLESGSPQLR01387.67662ECLLESGSPQLRlight1387.6766694.84562+y9986.52651+
ECLLESGSPQLR01387.67662ECLLESGSPQLRlight1387.6766694.84562+y8873.44251+
ECLLESGSPQLR01387.67662ECLLESGSPQLRlight1387.6766694.84562+y7744.39991+
ECLLESGSPQLR01387.67662ECLLESGSPQLRlight1387.6766694.84562+y6657.36781+
ECLLESGSPQLR01387.67662ECLLESGSPQLRlight1387.6766694.84562+y4513.31441+
G3NF68 Complement C1q-like protein 4
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
TTTGSMDLIYK01228.60091TTTGSMDLIYKlight1228.6009615.30772+y91027.51291+
TTTGSMDLIYK01228.60091TTTGSMDLIYKlight1228.6009615.30772+y8926.46521+
TTTGSMDLIYK01228.60091TTTGSMDLIYKlight1228.6009615.30772+y5651.37121+
TTTGSMDLIYK01228.60091TTTGSMDLIYKlight1228.6009615.30772+y3423.26021+
TTTGSMDLIYK01228.60091TTTGSMDLIYKlight1228.6009615.30772+y2310.17611+
FTANAPTNFPMSAVLYK01870.92883FTANAPTNFPMSAVLYKlight1870.9288624.65023+y8908.49101+
FTANAPTNFPMSAVLYK01870.92883FTANAPTNFPMSAVLYKlight1870.9288624.65023+y7811.43821+
FTANAPTNFPMSAVLYK01870.92883FTANAPTNFPMSAVLYKlight1870.9288624.65023+y6680.39781+
FTANAPTNFPMSAVLYK01870.92883FTANAPTNFPMSAVLYKlight1870.9288624.65023+y3423.26021+
FTANAPTNFPMSAVLYK01870.92883FTANAPTNFPMSAVLYKlight1870.9288624.65023+y2310.17611+
NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLK13588.80202NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLKlight3588.8020898.20784+y9985.60411+
NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLK13588.80202NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLKlight3588.8020898.20784+y8872.52001+
NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLK13588.80202NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLKlight3588.8020898.20784+y7759.43591+
NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLK13588.80202NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLKlight3588.8020898.20784+y6631.37741+
NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLK13588.80202NGAEVQLIAHEQPSGEGSDTASNGAALLLQAGDKLKlight3588.8020898.20784+y5560.34021+
G3NGU5 40S ribosomal protein S19
PeptidePeptide AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor AnnotationsLabelPrecursor Neutral MassQ1 m/zQ1 ZFragmentQ3 m/zQ3 Z
VPDWVDLVK01069.58082VPDWVDLVKlight1069.5808535.79772+y7874.46691+
VPDWVDLVK01069.58082VPDWVDLVKlight1069.5808535.79772+y6759.44001+
VPDWVDLVK01069.58082VPDWVDLVKlight1069.5808535.79772+y4474.29221+
VPDWVDLVK01069.58082VPDWVDLVKlight1069.5808535.79772+y2246.18121+
VPDWVDLVK01069.58082VPDWVDLVKlight1069.5808535.79772+y1147.11281+
VLQALELLK01025.64851VLQALELLKlight1025.6485513.83152+y7814.50331+
VLQALELLK01025.64851VLQALELLKlight1025.6485513.83152+y6686.44471+
VLQALELLK01025.64851VLQALELLKlight1025.6485513.83152+y4502.32351+
VLQALELLK01025.64851VLQALELLKlight1025.6485513.83152+y3373.28091+
VLQALELLK01025.64851VLQALELLKlight1025.6485513.83152+y2260.19691+