sp|P76008|LDCA_ECOLI: /JBEI/T.S. Batth et al. Metab. Eng. 2014 - A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins/Methods Development - 5500Q-trap data

sp|P76008|LDCA_ECOLI

Methods Development - 5500Q-trap data

Protein

File	Serine Protease.zip 1 MB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Murein tetrapeptide carboxypeptidase OS=Escherichia coli (strain K12) GN=ldcA PE=1 SV=1
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
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M	S	L	F	H	L	I	A	P	S	G	Y	C	I	K	Q	H	A	A	L	R	G	I	Q	R	L	T	D	A	G	H	Q	V	N	N	V	E	V	I	A	R	R	C	E	R	F	A	G	T	E	T	E	R	L	E	D	L	N	S	L	A	R	L	T	T	P	N	T	I	V	L	A	V	R	G	G	Y	G	A	S	R	L	L	A	D	I	D	W	Q	A	L	V	A	R	Q	Q	H	D	P	L

101										111										121										131										141										151										161										171										181										191
L	I	C	G	H	S	D	F	T	A	I	Q	C	G	L	L	A	H	G	N	V	I	T	F	S	G	P	M	L	V	A	N	F	G	A	D	E	L	N	A	F	T	E	H	H	F	W	L	A	L	R	N	E	T	F	T	I	E	W	Q	G	E	G	P	T	C	R	A	E	G	T	L	W	G	G	N	L	A	M	L	I	S	L	I	G	T	P	W	M	P	K	I	E	N	G	I	L	V	L	E

201										211										221										231										241										251										261										271										281										291
D	I	N	E	H	P	F	R	V	E	R	M	L	L	Q	L	Y	H	A	G	I	L	P	R	Q	K	A	I	I	L	G	S	F	S	G	S	T	P	N	D	Y	D	A	G	Y	N	L	E	S	V	Y	A	F	L	R	S	R	L	S	I	P	L	I	T	G	L	D	F	G	H	E	Q	R	T	V	T	L	P	L	G	A	H	A	I	L	N	N	T	R	E	G	T	Q	L	T	I	S	G	H	P

301
V	L	K	M

Annotations for sp|P76008|LDCA_ECOLI

Description	Murein tetrapeptide carboxypeptidase
Gene name	ldcA
Organisms	Escherichia coli Escherichia coli (strain K12)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Molecular Functions	Biological Processes
YP_489459.1 NP_415710.1	none loaded	O87499 P76008	LDCA_ECOLI	none loaded	none loaded	GO:0004180 GO:0005829 GO:0006508 GO:0008236 GO:0008360 GO:0009050 GO:0009252 GO:0009254	Carboxypeptidase Hydrolase Protease Serine protease	Cell shape Cell wall biogenesis/degradation Peptidoglycan synthesis

Peptides

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	LTTPNTIVLAVR	1296.7765	0	7.5621
	LLADIDWQALVAR	1482.8195	0	9.4929

Chromatograms

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Peak Areas

Retention Times