sp|P04036|DAPB_ECOLI: /JBEI/T.S. Batth et al. Metab. Eng. 2014 - A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins/Individual QconCAT Methods

sp|P04036|DAPB_ECOLI

Individual QconCAT Methods

Protein

File	Qcat4-Ind.sky 158 KB SkyP file (link only, 1KB) Full Skyline file Copy relative URL to clipboard Copy full URL to clipboard
Description	Dihydrodipicolinate reductase OS=Escherichia coli (strain K12) GN=dapB PE=1 SV=1
Decoy	false
Note

Sequence Coverage

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By: Replicate: Modified forms: Combined Stacked

The number displayed on each peptide box is the rank
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M	H	D	A	N	I	R	V	A	I	A	G	A	G	G	R	M	G	R	Q	L	I	Q	A	A	L	A	L	E	G	V	Q	L	G	A	A	L	E	R	E	G	S	S	L	L	G	S	D	A	G	E	L	A	G	A	G	K	T	G	V	T	V	Q	S	S	L	D	A	V	K	D	D	F	D	V	F	I	D	F	T	R	P	E	G	T	L	N	H	L	A	F	C	R	Q	H	G	K	G	M	V
																																							2

101										111										121										131										141										151										161										171										181										191
I	G	T	T	G	F	D	E	A	G	K	Q	A	I	R	D	A	A	A	D	I	A	I	V	F	A	A	N	F	S	V	G	V	N	V	M	L	K	L	L	E	K	A	A	K	V	M	G	D	Y	T	D	I	E	I	I	E	A	H	H	R	H	K	V	D	A	P	S	G	T	A	L	A	M	G	E	A	I	A	H	A	L	D	K	D	L	K	D	C	A	V	Y	S	R	E	G	H	T	G	E


201										211										221										231										241										251										261										271
R	V	P	G	T	I	G	F	A	T	V	R	A	G	D	I	V	G	E	H	T	A	M	F	A	D	I	G	E	R	L	E	I	T	H	K	A	S	S	R	M	T	F	A	N	G	A	V	R	S	A	L	W	L	S	G	K	E	S	G	L	F	D	M	R	D	V	L	D	L	N	N	L
	1

Intensity

(Log 10 base)

Annotations for sp|P04036|DAPB_ECOLI

Description	4-hydroxy-tetrahydrodipicolinate reductase (short name: HTPA reductase)
Gene name	dapB
Organisms	Escherichia coli Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) Escherichia coli (strain K12 / DH10B) Escherichia coli (strain K12 / MC4100 / BW2952) Escherichia coli (strain K12) Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)

Genbank IDs	GIs	Swiss-Prot Accessions	Swiss-Prot Names	Ensembl	IPI Numbers	GO Categories	Biological Processes	Molecular Functions
YP_001729014.1 YP_002925232.1 YP_488337.1 YP_002410810.1 YP_001726565.1 NP_414572.1	none loaded	B1XBF6 C4ZPV7 P04036 B1IRE5 B7N7Q5	DAPB_ECODH DAPB_ECOBW DAPB_ECOLI DAPB_ECOLC DAPB_ECOLU	none loaded	none loaded	GO:0005737 GO:0008839 GO:0009089 GO:0016726 GO:0019877 GO:0051287 GO:0070402 GO:0005829 GO:0042802	Amino-acid biosynthesis Diaminopimelate biosynthesis Lysine biosynthesis	Oxidoreductase

Peptides

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	EGSSLLGSDAGELAGAGK	1617.7845	0	7.8971
	VPGTIGFATVR	1116.6292	0	8.1975

Chromatograms

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Peak Areas

Retention Times