GO_Broad_Targets_HighCurve_Final_050612_v2_2015-04-09_15-13-58.sky.zip

ResponseCurve
Name: GO_Broad_Targets_HighCurve_Final_050612_v2_2015-04-09_15-13-58.sky.zip (22 MB)   1 version
 
79 proteins, 153 peptides, 306 precursors, 918 transitions  -  27 replicates  -  Skyline-daily (64-bit) 3.1.1.7317
Protein / LabelDescriptionProtein Note/Annotations 
ABCF1.IPI00013495 IPI:IPI00013495.1|SWISS-PROT:Q8NE71-2|TREMBL:Q2L6I2|ENSEMBL:ENSP00000365728;ENSP00000373081;ENSP00000389472;ENSP00000391102;ENSP00000393143;ENSP00000403526;ENSP00000404726|REFSEQ:NP_001081|VEGA:OTTHUMP00000014745;OTTHUMP00000029110;OTTHUMP00000029519;OTTHUMP00000164006;OTTHUMP00000193394;OTTHUMP00000193846;OTTHUMP00000194223 Tax_Id=9606 Gene_Symbol=ABCF1 Isoform 2 of ATP-binding cassette sub-family F member 1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
STLLLLLTGK01057.6747 STLLLLLTGKlight2+529.84461057.6747325.7972100.0000
STLLLLLTGK01057.6747 STLLLLLTGKheavy2+533.85171065.6889325.7972100.0000
IGFFNQQYAEQLR01612.7998 IGFFNQQYAEQLRlight2+807.40721612.7998340.4525100.0000
IGFFNQQYAEQLR01612.7998 IGFFNQQYAEQLRheavy2+812.41131622.8081340.4525100.0000
ACOT7.IPI00010415 IPI:IPI00010415.2|SWISS-PROT:O00154-1|ENSEMBL:ENSP00000367086|REFSEQ:NP_863654|VEGA:OTTHUMP00000001410 Tax_Id=9606 Gene_Symbol=ACOT7 Isoform 1 of Cytosolic acyl coenzyme A thioester hydrolase
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
VLEVPPVVYSR01256.7129 VLEVPPVVYSRlight2+629.36371256.7129331.0518100.0000
VLEVPPVVYSR01256.7129 VLEVPPVVYSRheavy2+634.36781266.7211331.0518100.0000
AASAFFTYVSLSQEGR01732.8420 AASAFFTYVSLSQEGRlight2+867.42831732.8420343.6216100.0000
AASAFFTYVSLSQEGR01732.8420 AASAFFTYVSLSQEGRheavy2+872.43241742.8503343.6216100.0000
ACSL1.IPI00012728 IPI:IPI00012728.1|SWISS-PROT:P33121-1|TREMBL:A8K9T3;B7Z452|ENSEMBL:ENSP00000281455|REFSEQ:NP_001986|H-INV:HIT000053393 Tax_Id=9606 Gene_Symbol=ACSL1 Isoform 1 of Long-chain-fatty-acid--CoA ligase 1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
IGFFQGDIR01051.5451 IGFFQGDIRlight2+526.77981051.5451325.6354100.0000
IGFFQGDIR01051.5451 IGFFQGDIRheavy2+531.78401061.5533325.6354100.0000
VLQPTVFPVVPR01350.8024 VLQPTVFPVVPRlight2+676.40851350.8024333.5358100.0000
VLQPTVFPVVPR01350.8024 VLQPTVFPVVPRheavy2+681.41261360.8106333.5358100.0000
AIP.IPI00925804 IPI:IPI00925804.1|TREMBL:A5JGZ4 Tax_Id=9606 Gene_Symbol=AIP Non-functional aryl hydrocarbon receptor interacting protein (Fragment)
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
YYDAIACLK01115.5321 YYDAIACLKlight2+558.77331115.5321327.3246100.0000
YYDAIACLK01115.5321 YYDAIACLKheavy2+562.78041123.5463327.3246100.0000
VLELDPALAPVVSR01477.8504 VLELDPALAPVVSRlight2+739.93251477.8504336.8898100.0000
VLELDPALAPVVSR01477.8504 VLELDPALAPVVSRheavy2+744.93661487.8587336.8898100.0000
ALDH9A1.IPI00479877 IPI:IPI00479877.4|SWISS-PROT:P49189|TREMBL:B4DE91;B4DX14;B4DXY7;B4DYY1;B9EKV4|ENSEMBL:ENSP00000346827|REFSEQ:NP_000687|H-INV:HIT000304494|VEGA:OTTHUMP00000032604 Tax_Id=9606 Gene_Symbol=ALDH9A1 aldehyde dehydrogenase 9A1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
IGDPLLEDTR01127.5823 IGDPLLEDTRlight2+564.79841127.5823327.6428100.0000
IGDPLLEDTR01127.5823 IGDPLLEDTRheavy2+569.80251137.5905327.6428100.0000
VLCGGDIYVPEDPK01560.7494 VLCGGDIYVPEDPKlight2+781.38201560.7494339.0784100.0000
VLCGGDIYVPEDPK01560.7494 VLCGGDIYVPEDPKheavy2+785.38911568.7636339.0784100.0000
ANXA1.IPI00218918 IPI:IPI00218918.5|SWISS-PROT:P04083|TREMBL:B5BU38;Q05BR2;Q5TZZ9|ENSEMBL:ENSP00000257497;ENSP00000366109|REFSEQ:NP_000691|H-INV:HIT000280183|VEGA:OTTHUMP00000021474;OTTHUMP00000021475 Tax_Id=9606 Gene_Symbol=ANXA1 Annexin A1
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
TPAQFDADELR01261.5939 TPAQFDADELRlight2+631.80421261.5939331.1807100.0000
TPAQFDADELR01261.5939 TPAQFDADELRheavy2+636.80841271.6021331.1807100.0000
GTDVNVFNTILTTR01549.8100 GTDVNVFNTILTTRlight2+775.91231549.8100338.7896100.0000
GTDVNVFNTILTTR01549.8100 GTDVNVFNTILTTRheavy2+780.91641559.8183338.7896100.0000
ANXA6.IPI00002459 IPI:IPI00002459.4|TREMBL:A6NN80|ENSEMBL:ENSP00000348889|REFSEQ:NP_004024 Tax_Id=9606 Gene_Symbol=ANXA6 annexin VI isoform 2
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
EAILDIITSR01129.6343 EAILDIITSRlight2+565.82441129.6343327.6969100.0000
EAILDIITSR01129.6343 EAILDIITSRheavy2+570.82861139.6426327.6969100.0000
WGTDEAQFIYILGNRmissed half of peptide in half of samples.01781.8737 WGTDEAQFIYILGNRlight2+891.94411781.8737344.9160100.0000
WGTDEAQFIYILGNRmissed half of peptide in half of samples.01781.8737 WGTDEAQFIYILGNRheavy2+896.94831791.8820344.9160100.0000
ATP5B.IPI00303476 IPI:IPI00303476.1|SWISS-PROT:P06576|TREMBL:Q0QEN7|ENSEMBL:ENSP00000262030|REFSEQ:NP_001677|H-INV:HIT000279396|VEGA:OTTHUMP00000168049 Tax_Id=9606 Gene_Symbol=ATP5B ATP synthase subunit beta, mitochondrial
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
VALTGLTVAEYFR01438.7820 VALTGLTVAEYFRlight2+720.39831438.7820335.8584100.0000
VALTGLTVAEYFR01438.7820 VALTGLTVAEYFRheavy2+725.40241448.7903335.8584100.0000
FTQAGSEVSALLGR01434.7467 FTQAGSEVSALLGRlight2+718.38061434.7467335.7519100.0000
FTQAGSEVSALLGR01434.7467 FTQAGSEVSALLGRheavy2+723.38481444.7550335.7519100.0000
BAG3.IPI00641582 IPI:IPI00641582.1|SWISS-PROT:O95817|TREMBL:Q53GY1|ENSEMBL:ENSP00000358081|REFSEQ:NP_004272|H-INV:HIT000032821|VEGA:OTTHUMP00000020599 Tax_Id=9606 Gene_Symbol=BAG3 BAG family molecular chaperone regulator 3
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
AAPSTAPAEATPPKPGEAEAPPK02184.1063 AAPSTAPAEATPPKPGEAEAPPKlight3+729.04272184.1063331.3767100.0000
AAPSTAPAEATPPKPGEAEAPPK02184.1063 AAPSTAPAEATPPKPGEAEAPPKheavy3+731.71412192.1205331.3767100.0000
ELLALDSVDPEGR01412.7147 ELLALDSVDPEGRlight2+707.36461412.7147335.1703100.0000
ELLALDSVDPEGR01412.7147 ELLALDSVDPEGRheavy2+712.36881422.7230335.1703100.0000
BSG.IPI00019906 IPI:IPI00019906.1|SWISS-PROT:P35613-2|TREMBL:B4DY23;Q54A51|ENSEMBL:ENSP00000343809|REFSEQ:NP_940991|H-INV:HIT000272095|VEGA:OTTHUMP00000076161 Tax_Id=9606 Gene_Symbol=BSG Isoform 2 of Basigin
PeptidePeptide Note/AnnotationsMissed CleavagesPeptide Neutral MassRankPrecursorPrecursor Note/AnnotationsLabelQ1 ZQ1 m/zPrecursor Neutral MassTransition CountCEDP
SESVPPVTDWAWYK01663.7882 SESVPPVTDWAWYKlight2+832.90141663.7882341.7986100.0000
SESVPPVTDWAWYK01663.7882 SESVPPVTDWAWYKheavy2+836.90851671.8024341.7986100.0000
FFVSSSQGR01013.4930 FFVSSSQGRlight2+507.75381013.4930324.6308100.0000
FFVSSSQGR01013.4930 FFVSSSQGRheavy2+512.75791023.5013324.6308100.0000