Main Settings Skyline file: C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky Folder to watch: C:\MassLynx\PeptideMix1-SystemCheck.pro\Data Include subfolders: True Filter Type: All Instrument: Waters Results window: 365 days Acquisition time: 5 minutes Panorama Settings Panorama server URL: https://panoramaweb.org/labkey/project/Waters%20-%20System%20Suitability/TQ-XS%2003/begin.view? Panorama user email: nikunj_tanna@waters.com Panorama folder: /Waters - System Suitability/TQ-XS 03 [1/30/2018 2:28:15 PM] Getting the acquisition date on the newest file imported into the Skyline document. [1/30/2018 2:28:15 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:15 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --report-conflict-resolution=overwrite --report-add="C:\Users\Administrator\AppData\Local\Apps\2.0\HTVZ6ZOT.T3J\MKDXL028.D0Q\auto..tion_e4141a2a22107248_0001.0001_57bf953e1a79aace\FileAcquisitionTime.skyr" --report-name="AcquisitionTimes" --report-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv" [1/30/2018 2:28:20 PM] The name 'AcquisitionTimes' already exists. [1/30/2018 2:28:20 PM] Resolving conflicts by overwriting. [1/30/2018 2:28:21 PM] Success! Imported Reports from FileAcquisitionTime [1/30/2018 2:28:21 PM] Opening file... [1/30/2018 2:28:22 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:22 PM] Exporting report AcquisitionTimes... [1/30/2018 2:28:22 PM] Report AcquisitionTimes exported successfully to C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv. [1/30/2018 2:28:22 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:22 PM] The most recent acquisition date in the Skyline document is 1/8/2018 8:02:52 AM [1/30/2018 2:28:22 PM] Initializing Panorama pinger... [1/30/2018 2:28:22 PM] Starting configuration... [1/30/2018 2:28:22 PM] Importing existing files... [1/30/2018 2:28:22 PM] Existing files found: 122 [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_001.raw was acquired (9/29/2017 9:50:46 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_002.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_003.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_004.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_005.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_006.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_007.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_008.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_009.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_010.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_011.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_012.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_013.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_014.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_015.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_016.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_017.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_018.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_019.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:50:59 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_015.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_016.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_017.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_018.raw was acquired (9/29/2017 9:51:01 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_019.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_020.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_021.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_022.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_023.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_024.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_025.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_026.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_027.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_028.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:51:05 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:51:09 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:51:10 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:51:12 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 01.raw was acquired (9/29/2017 10:55:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 02.raw was acquired (9/29/2017 11:01:35 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 03.raw was acquired (9/29/2017 11:07:19 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 04.raw was acquired (9/29/2017 11:13:05 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 05.raw was acquired (9/29/2017 11:18:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 01.raw was acquired (9/29/2017 11:24:33 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 02.raw was acquired (9/29/2017 11:30:17 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 03.raw was acquired (9/29/2017 11:36:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 04.raw was acquired (9/29/2017 11:41:45 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 05.raw was acquired (9/29/2017 11:47:29 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 06.raw was acquired (9/29/2017 11:53:13 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 06.raw was acquired (9/29/2017 11:58:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 07.raw was acquired (9/29/2017 12:04:43 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 08.raw was acquired (9/29/2017 12:10:28 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 01.raw was acquired (10/3/2017 1:59:52 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 02.raw was acquired (10/3/2017 2:05:38 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 03.raw was acquired (10/3/2017 2:11:22 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 04.raw was acquired (10/3/2017 2:17:05 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 05.raw was acquired (10/3/2017 2:22:49 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 01.raw was acquired (10/3/2017 2:28:33 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 02.raw was acquired (10/3/2017 2:34:16 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 03.raw was acquired (10/3/2017 2:40:00 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 04.raw was acquired (10/3/2017 2:45:44 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 05.raw was acquired (10/3/2017 2:51:29 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 06.raw was acquired (10/3/2017 2:57:13 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 06.raw was acquired (10/3/2017 3:02:56 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 07.raw was acquired (10/3/2017 3:08:40 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 08.raw was acquired (10/3/2017 3:14:25 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\RES CHECK.raw was acquired (1/2/2018 11:17:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_001.raw was acquired (1/3/2018 11:59:15 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_002.raw was acquired (1/3/2018 12:04:59 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_003.raw was acquired (1/3/2018 12:10:42 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_004.raw was acquired (1/3/2018 12:16:25 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_005.raw was acquired (1/3/2018 12:22:08 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_006.raw was acquired (1/3/2018 12:27:51 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_007.raw was acquired (1/3/2018 12:33:33 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_008.raw was acquired (1/3/2018 12:39:17 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_009.raw was acquired (1/3/2018 12:45:01 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_010.raw was acquired (1/3/2018 12:50:43 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_011.raw was acquired (1/3/2018 12:56:27 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_012.raw was acquired (1/3/2018 1:02:10 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/30/2018 2:28:22 PM] 2018-01-08_PeptideMix1_Sol 01.raw is ready [1/30/2018 2:28:22 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:22 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 01.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:23 PM] Opening file... [1/30/2018 2:28:24 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:25 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 01 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:25 PM] Saving file... [1/30/2018 2:28:25 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:25 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:25 PM] 2018-01-08_PeptideMix1_Sol 02.raw is ready [1/30/2018 2:28:25 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:25 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 02.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:26 PM] Opening file... [1/30/2018 2:28:27 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:27 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 02 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:27 PM] Saving file... [1/30/2018 2:28:27 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:27 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:27 PM] 2018-01-08_PeptideMix1_Sol 03.raw is ready [1/30/2018 2:28:27 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:27 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 03.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:28 PM] Opening file... [1/30/2018 2:28:29 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:30 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 03 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:30 PM] Saving file... [1/30/2018 2:28:30 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:30 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:30 PM] 2018-01-08_PeptideMix1_QC_001.raw is ready [1/30/2018 2:28:30 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:30 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_001.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:31 PM] Opening file... [1/30/2018 2:28:32 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:32 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_001 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:32 PM] Saving file... [1/30/2018 2:28:32 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:32 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:32 PM] 2018-01-08_PeptideMix1_QC_002.raw is ready [1/30/2018 2:28:32 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:32 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_002.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:33 PM] Successfully pinged Panorama server. [1/30/2018 2:28:33 PM] Opening file... [1/30/2018 2:28:34 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:34 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_002 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:34 PM] Saving file... [1/30/2018 2:28:35 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:35 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:35 PM] 2018-01-08_PeptideMix1_QC_003.raw is ready [1/30/2018 2:28:35 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:35 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_003.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:36 PM] Opening file... [1/30/2018 2:28:37 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:37 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_003 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:37 PM] Saving file... [1/30/2018 2:28:37 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:37 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:37 PM] 2018-01-08_PeptideMix1_QC_004.raw is ready [1/30/2018 2:28:37 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:37 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_004.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:38 PM] Opening file... [1/30/2018 2:28:39 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:39 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_004 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:39 PM] Saving file... [1/30/2018 2:28:39 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:39 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:39 PM] 2018-01-08_PeptideMix1_QC_005.raw is ready [1/30/2018 2:28:39 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:39 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_005.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:40 PM] Opening file... [1/30/2018 2:28:41 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:41 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_005 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:41 PM] Saving file... [1/30/2018 2:28:42 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:42 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:42 PM] 2018-01-08_PeptideMix1_QC_006.raw is ready [1/30/2018 2:28:42 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:42 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_006.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:43 PM] Opening file... [1/30/2018 2:28:44 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:44 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_006 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:44 PM] Saving file... [1/30/2018 2:28:44 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:44 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:44 PM] 2018-01-08_PeptideMix1_QC_007.raw is ready [1/30/2018 2:28:44 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:44 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_007.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:45 PM] Opening file... [1/30/2018 2:28:46 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:46 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_007 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:46 PM] Saving file... [1/30/2018 2:28:46 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:46 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:46 PM] 2018-01-08_PeptideMix1_QC_008.raw is ready [1/30/2018 2:28:46 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:46 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_008.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:47 PM] Opening file... [1/30/2018 2:28:48 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:49 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_008 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:49 PM] Saving file... [1/30/2018 2:28:49 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:49 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:49 PM] 2018-01-08_PeptideMix1_QC_009.raw is ready [1/30/2018 2:28:49 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:49 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_009.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:50 PM] Opening file... [1/30/2018 2:28:51 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:51 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_009 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:51 PM] Saving file... [1/30/2018 2:28:51 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:51 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:51 PM] 2018-01-08_PeptideMix1_QC_010.raw is ready [1/30/2018 2:28:51 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:51 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_010.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:52 PM] Opening file... [1/30/2018 2:28:53 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:53 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_010 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:53 PM] Saving file... [1/30/2018 2:28:53 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:53 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:54 PM] 2018-01-08_PeptideMix1_QC_011.raw is ready [1/30/2018 2:28:54 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:54 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_011.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:54 PM] Opening file... [1/30/2018 2:28:55 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:56 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_011 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:56 PM] Saving file... [1/30/2018 2:28:56 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:56 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:56 PM] 2018-01-08_PeptideMix1_QC_012.raw is ready [1/30/2018 2:28:56 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:56 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_012.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:57 PM] Opening file... [1/30/2018 2:28:58 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:28:58 PM] Warning: The replicate 2018-01-08_PeptideMix1_QC_012 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:28:58 PM] Saving file... [1/30/2018 2:28:58 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:28:58 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:28:58 PM] 2018-01-08_PeptideMix1_Sol 04.raw is ready [1/30/2018 2:28:58 PM] Running SkylineRunner.exe with args: [1/30/2018 2:28:58 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 04.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:28:59 PM] Opening file... [1/30/2018 2:29:00 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:29:00 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 04 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:29:00 PM] Saving file... [1/30/2018 2:29:00 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:29:00 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:29:00 PM] 2018-01-08_PeptideMix1_Sol 05.raw is ready [1/30/2018 2:29:00 PM] Running SkylineRunner.exe with args: [1/30/2018 2:29:00 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 05.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:29:01 PM] Opening file... [1/30/2018 2:29:02 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:29:02 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 05 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:29:02 PM] Saving file... [1/30/2018 2:29:03 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:29:03 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:29:03 PM] 2018-01-08_PeptideMix1_Sol 06.raw is ready [1/30/2018 2:29:03 PM] Running SkylineRunner.exe with args: [1/30/2018 2:29:03 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 06.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:29:04 PM] Opening file... [1/30/2018 2:29:05 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:29:05 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 06 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:29:05 PM] Saving file... [1/30/2018 2:29:05 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:29:05 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:29:05 PM] 2018-01-08_PeptideMix1_Sol 07.raw is ready [1/30/2018 2:29:05 PM] Running SkylineRunner.exe with args: [1/30/2018 2:29:05 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 07.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/30/2018 2:29:06 PM] Opening file... [1/30/2018 2:29:07 PM] File 24Aug2017_XS02.sky opened. [1/30/2018 2:29:07 PM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 07 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/30/2018 2:29:07 PM] Saving file... [1/30/2018 2:29:07 PM] File 24Aug2017_XS02.sky saved. [1/30/2018 2:29:07 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:29:07 PM] 2018-01-30_PeptideMix1_Sol 01.raw is ready [1/30/2018 2:29:07 PM] Running SkylineRunner.exe with args: [1/30/2018 2:29:07 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/30/2018 2:29:09 PM] The username and password could not be authenticated with the panorama server. [1/30/2018 2:29:09 PM] Exiting... [1/30/2018 2:29:09 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:29:09 PM] Finished importing existing files... [1/30/2018 2:29:09 PM] Importing new files... [1/30/2018 2:29:09 PM] Waiting for files... [1/30/2018 2:30:30 PM] 2018-01-30_PeptideMix1_Sol 01.raw added to directory. [1/30/2018 2:30:34 PM] 2018-01-30_PeptideMix1_Sol 01.raw is being acquired. Waiting... [1/30/2018 2:35:35 PM] 2018-01-30_PeptideMix1_Sol 01.raw is ready [1/30/2018 2:35:35 PM] Running SkylineRunner.exe with args: [1/30/2018 2:35:35 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --remove-before=1/31/2017 --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw" --import-on-or-after=1/31/2017 --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/30/2018 2:35:36 PM] The username and password could not be authenticated with the panorama server. [1/30/2018 2:35:36 PM] Exiting... [1/30/2018 2:35:36 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:35:36 PM] Waiting for files... [1/30/2018 2:36:52 PM] 2018-01-30_PeptideMix1_Sol 02.raw added to directory. [1/30/2018 2:36:56 PM] 2018-01-30_PeptideMix1_Sol 02.raw is being acquired. Waiting... [1/30/2018 2:41:56 PM] 2018-01-30_PeptideMix1_Sol 02.raw is ready [1/30/2018 2:41:56 PM] Running SkylineRunner.exe with args: [1/30/2018 2:41:56 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --remove-before=1/31/2017 --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 02.raw" --import-on-or-after=1/31/2017 --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/30/2018 2:41:58 PM] The username and password could not be authenticated with the panorama server. [1/30/2018 2:41:58 PM] Exiting... [1/30/2018 2:41:58 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:41:58 PM] Waiting for files... [1/30/2018 2:42:36 PM] 2018-01-30_PeptideMix1_Sol 03.raw added to directory. [1/30/2018 2:42:38 PM] 2018-01-30_PeptideMix1_Sol 03.raw is being acquired. Waiting... [1/30/2018 2:47:38 PM] 2018-01-30_PeptideMix1_Sol 03.raw is ready [1/30/2018 2:47:38 PM] Running SkylineRunner.exe with args: [1/30/2018 2:47:38 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --remove-before=1/31/2017 --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 03.raw" --import-on-or-after=1/31/2017 --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/30/2018 2:47:40 PM] The username and password could not be authenticated with the panorama server. [1/30/2018 2:47:40 PM] Exiting... [1/30/2018 2:47:40 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:47:40 PM] Waiting for files... [1/30/2018 2:48:18 PM] 2018-01-30_PeptideMix1_QC_001.raw added to directory. [1/30/2018 2:48:20 PM] 2018-01-30_PeptideMix1_QC_001.raw is being acquired. Waiting... [1/30/2018 2:53:20 PM] 2018-01-30_PeptideMix1_QC_001.raw is ready [1/30/2018 2:53:20 PM] Running SkylineRunner.exe with args: [1/30/2018 2:53:20 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --remove-before=1/31/2017 --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_001.raw" --import-on-or-after=1/31/2017 --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/30/2018 2:53:22 PM] The username and password could not be authenticated with the panorama server. [1/30/2018 2:53:22 PM] Exiting... [1/30/2018 2:53:22 PM] SkylineRunner.exe exited successfully. [1/30/2018 2:53:22 PM] Waiting for files... [1/31/2018 9:17:33 AM] Logging initialized... Name: TQ-XS 03 Enabled: True Panorama User: nikunj_tanna@waters.com Created: 11/8/20171:02 PM Modified: 1/8/20184:01 PM Main Settings Skyline file: C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky Folder to watch: C:\MassLynx\PeptideMix1-SystemCheck.pro\Data Include subfolders: True Filter Type: All Instrument: Waters Results window: 365 days Acquisition time: 5 minutes Panorama Settings Panorama server URL: https://panoramaweb.org/ Panorama user email: nikunj_tanna@waters.com Panorama folder: /Waters - System Suitability/TQ-XS 03 [1/31/2018 9:17:35 AM] Getting the acquisition date on the newest file imported into the Skyline document. [1/31/2018 9:17:35 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:35 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --report-conflict-resolution=overwrite --report-add="C:\Users\Administrator\AppData\Local\Apps\2.0\HTVZ6ZOT.T3J\MKDXL028.D0Q\auto..tion_e4141a2a22107248_0001.0001_57bf953e1a79aace\FileAcquisitionTime.skyr" --report-name="AcquisitionTimes" --report-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv" [1/31/2018 9:17:40 AM] The name 'AcquisitionTimes' already exists. [1/31/2018 9:17:40 AM] Resolving conflicts by overwriting. [1/31/2018 9:17:40 AM] Success! Imported Reports from FileAcquisitionTime [1/31/2018 9:17:40 AM] Opening file... [1/31/2018 9:17:41 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:41 AM] Exporting report AcquisitionTimes... [1/31/2018 9:17:41 AM] Report AcquisitionTimes exported successfully to C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv. [1/31/2018 9:17:41 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:41 AM] The most recent acquisition date in the Skyline document is 1/8/2018 8:02:52 AM [1/31/2018 9:17:41 AM] Initializing Panorama pinger... [1/31/2018 9:17:41 AM] Starting configuration... [1/31/2018 9:17:42 AM] Importing existing files... [1/31/2018 9:17:42 AM] Existing files found: 134 [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_001.raw was acquired (9/29/2017 9:50:46 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_002.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_003.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_004.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_005.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_006.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_007.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_008.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_009.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_010.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_011.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_012.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_013.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_014.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_015.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_016.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_017.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_018.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_019.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:50:59 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_015.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_016.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_017.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_018.raw was acquired (9/29/2017 9:51:01 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_019.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_020.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_021.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_022.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_023.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_024.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_025.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_026.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_027.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_028.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:51:05 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:51:09 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:51:10 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:51:12 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 01.raw was acquired (9/29/2017 10:55:50 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 02.raw was acquired (9/29/2017 11:01:35 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 03.raw was acquired (9/29/2017 11:07:19 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 04.raw was acquired (9/29/2017 11:13:05 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 05.raw was acquired (9/29/2017 11:18:49 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 01.raw was acquired (9/29/2017 11:24:33 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 02.raw was acquired (9/29/2017 11:30:17 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 03.raw was acquired (9/29/2017 11:36:00 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 04.raw was acquired (9/29/2017 11:41:45 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 05.raw was acquired (9/29/2017 11:47:29 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 06.raw was acquired (9/29/2017 11:53:13 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 06.raw was acquired (9/29/2017 11:58:58 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 07.raw was acquired (9/29/2017 12:04:43 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 08.raw was acquired (9/29/2017 12:10:28 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 01.raw was acquired (10/3/2017 1:59:52 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 02.raw was acquired (10/3/2017 2:05:38 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 03.raw was acquired (10/3/2017 2:11:22 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 04.raw was acquired (10/3/2017 2:17:05 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 05.raw was acquired (10/3/2017 2:22:49 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 01.raw was acquired (10/3/2017 2:28:33 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 02.raw was acquired (10/3/2017 2:34:16 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 03.raw was acquired (10/3/2017 2:40:00 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 04.raw was acquired (10/3/2017 2:45:44 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 05.raw was acquired (10/3/2017 2:51:29 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 06.raw was acquired (10/3/2017 2:57:13 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 06.raw was acquired (10/3/2017 3:02:56 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 07.raw was acquired (10/3/2017 3:08:40 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 08.raw was acquired (10/3/2017 3:14:25 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\RES CHECK.raw was acquired (1/2/2018 11:17:52 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_001.raw was acquired (1/3/2018 11:59:15 AM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_002.raw was acquired (1/3/2018 12:04:59 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_003.raw was acquired (1/3/2018 12:10:42 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_004.raw was acquired (1/3/2018 12:16:25 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_005.raw was acquired (1/3/2018 12:22:08 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_006.raw was acquired (1/3/2018 12:27:51 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_007.raw was acquired (1/3/2018 12:33:33 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_008.raw was acquired (1/3/2018 12:39:17 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_009.raw was acquired (1/3/2018 12:45:01 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_010.raw was acquired (1/3/2018 12:50:43 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_011.raw was acquired (1/3/2018 12:56:27 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_012.raw was acquired (1/3/2018 1:02:10 PM) before the acquisition date (1/8/2018 8:02:52 AM) on the last imported file in the Skyline document. Skipping... [1/31/2018 9:17:42 AM] 2018-01-08_PeptideMix1_Sol 01.raw is ready [1/31/2018 9:17:42 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:42 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 01.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:47 AM] Opening file... [1/31/2018 9:17:47 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:47 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 01 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:17:47 AM] Saving file... [1/31/2018 9:17:47 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:17:47 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:47 AM] 2018-01-08_PeptideMix1_Sol 02.raw is ready [1/31/2018 9:17:48 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:48 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 02.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:49 AM] Opening file... [1/31/2018 9:17:50 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:50 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 02 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:17:50 AM] Saving file... [1/31/2018 9:17:50 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:17:50 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:50 AM] 2018-01-08_PeptideMix1_Sol 03.raw is ready [1/31/2018 9:17:50 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:50 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 03.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:51 AM] Opening file... [1/31/2018 9:17:52 AM] Successfully pinged Panorama server. [1/31/2018 9:17:52 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:52 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 03 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:17:52 AM] Saving file... [1/31/2018 9:17:53 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:17:53 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:53 AM] 2018-01-08_PeptideMix1_QC_001.raw is ready [1/31/2018 9:17:53 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:53 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_001.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:54 AM] Opening file... [1/31/2018 9:17:55 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:55 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_001 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:17:55 AM] Saving file... [1/31/2018 9:17:55 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:17:55 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:55 AM] 2018-01-08_PeptideMix1_QC_002.raw is ready [1/31/2018 9:17:55 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:55 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_002.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:57 AM] Opening file... [1/31/2018 9:17:57 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:17:58 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_002 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:17:58 AM] Saving file... [1/31/2018 9:17:58 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:17:58 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:17:58 AM] 2018-01-08_PeptideMix1_QC_003.raw is ready [1/31/2018 9:17:58 AM] Running SkylineRunner.exe with args: [1/31/2018 9:17:58 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_003.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:17:59 AM] Opening file... [1/31/2018 9:18:00 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:00 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_003 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:00 AM] Saving file... [1/31/2018 9:18:00 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:01 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:01 AM] 2018-01-08_PeptideMix1_QC_004.raw is ready [1/31/2018 9:18:01 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:01 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_004.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:02 AM] Opening file... [1/31/2018 9:18:03 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:03 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_004 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:03 AM] Saving file... [1/31/2018 9:18:03 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:03 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:03 AM] 2018-01-08_PeptideMix1_QC_005.raw is ready [1/31/2018 9:18:03 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:03 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_005.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:04 AM] Opening file... [1/31/2018 9:18:05 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:05 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_005 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:06 AM] Saving file... [1/31/2018 9:18:06 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:06 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:06 AM] 2018-01-08_PeptideMix1_QC_006.raw is ready [1/31/2018 9:18:06 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:06 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_006.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:07 AM] Opening file... [1/31/2018 9:18:08 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:08 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_006 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:08 AM] Saving file... [1/31/2018 9:18:08 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:08 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:08 AM] 2018-01-08_PeptideMix1_QC_007.raw is ready [1/31/2018 9:18:08 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:08 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_007.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:09 AM] Opening file... [1/31/2018 9:18:10 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:11 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_007 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:11 AM] Saving file... [1/31/2018 9:18:11 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:11 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:11 AM] 2018-01-08_PeptideMix1_QC_008.raw is ready [1/31/2018 9:18:11 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:11 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_008.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:12 AM] Opening file... [1/31/2018 9:18:13 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:13 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_008 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:13 AM] Saving file... [1/31/2018 9:18:13 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:13 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:13 AM] 2018-01-08_PeptideMix1_QC_009.raw is ready [1/31/2018 9:18:13 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:13 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_009.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:14 AM] Opening file... [1/31/2018 9:18:15 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:16 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_009 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:16 AM] Saving file... [1/31/2018 9:18:16 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:16 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:16 AM] 2018-01-08_PeptideMix1_QC_010.raw is ready [1/31/2018 9:18:16 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:16 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_010.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:17 AM] Opening file... [1/31/2018 9:18:18 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:18 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_010 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:18 AM] Saving file... [1/31/2018 9:18:18 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:18 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:18 AM] 2018-01-08_PeptideMix1_QC_011.raw is ready [1/31/2018 9:18:18 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:18 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_011.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:19 AM] Opening file... [1/31/2018 9:18:20 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:21 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_011 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:21 AM] Saving file... [1/31/2018 9:18:21 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:21 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:21 AM] 2018-01-08_PeptideMix1_QC_012.raw is ready [1/31/2018 9:18:21 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:21 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_012.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:22 AM] Opening file... [1/31/2018 9:18:23 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:23 AM] Warning: The replicate 2018-01-08_PeptideMix1_QC_012 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:23 AM] Saving file... [1/31/2018 9:18:23 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:23 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:23 AM] 2018-01-08_PeptideMix1_Sol 04.raw is ready [1/31/2018 9:18:23 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:23 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 04.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:24 AM] Opening file... [1/31/2018 9:18:25 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:26 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 04 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:26 AM] Saving file... [1/31/2018 9:18:26 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:26 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:26 AM] 2018-01-08_PeptideMix1_Sol 05.raw is ready [1/31/2018 9:18:26 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:26 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 05.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:27 AM] Opening file... [1/31/2018 9:18:28 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:28 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 05 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:28 AM] Saving file... [1/31/2018 9:18:28 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:28 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:28 AM] 2018-01-08_PeptideMix1_Sol 06.raw is ready [1/31/2018 9:18:28 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:28 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 06.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:29 AM] Opening file... [1/31/2018 9:18:30 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:31 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 06 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:31 AM] Saving file... [1/31/2018 9:18:31 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:31 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:31 AM] 2018-01-08_PeptideMix1_Sol 07.raw is ready [1/31/2018 9:18:31 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:31 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 07.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:32 AM] Opening file... [1/31/2018 9:18:33 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:33 AM] Warning: The replicate 2018-01-08_PeptideMix1_Sol 07 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [1/31/2018 9:18:33 AM] Saving file... [1/31/2018 9:18:33 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:33 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:34 AM] 2018-01-30_PeptideMix1_Sol 01.raw is ready [1/31/2018 9:18:34 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:34 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:35 AM] Opening file... [1/31/2018 9:18:35 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:36 AM] [1/31/2018 9:18:36 AM] Adding results... [1/31/2018 9:18:36 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw [1/31/2018 9:18:36 AM] [1/31/2018 9:18:38 AM] Updating peak statistics [1/31/2018 9:18:39 AM] Joining file C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\2018-01-30_PeptideMix1_Sol 01_1887637636.raw.skyd [1/31/2018 9:18:39 AM] Saving file... [1/31/2018 9:18:39 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:39 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:39 AM] 2018-01-30_PeptideMix1_Sol 02.raw is ready [1/31/2018 9:18:39 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:39 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 02.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:40 AM] Opening file... [1/31/2018 9:18:41 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:41 AM] [1/31/2018 9:18:41 AM] Adding results... [1/31/2018 9:18:41 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 02.raw [1/31/2018 9:18:41 AM] [1/31/2018 9:18:42 AM] Saving file... [1/31/2018 9:18:43 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:43 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:43 AM] 2018-01-30_PeptideMix1_Sol 03.raw is ready [1/31/2018 9:18:43 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:43 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 03.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:44 AM] Opening file... [1/31/2018 9:18:45 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:45 AM] [1/31/2018 9:18:45 AM] Adding results... [1/31/2018 9:18:45 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 03.raw [1/31/2018 9:18:45 AM] [1/31/2018 9:18:46 AM] Saving file... [1/31/2018 9:18:47 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:47 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:47 AM] 2018-01-30_PeptideMix1_QC_002.raw is ready [1/31/2018 9:18:47 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:47 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_002.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:48 AM] Opening file... [1/31/2018 9:18:49 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:49 AM] [1/31/2018 9:18:49 AM] Adding results... [1/31/2018 9:18:49 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_002.raw [1/31/2018 9:18:49 AM] [1/31/2018 9:18:50 AM] Saving file... [1/31/2018 9:18:50 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:51 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:51 AM] 2018-01-30_PeptideMix1_QC_003.raw is ready [1/31/2018 9:18:51 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:51 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_003.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:52 AM] Opening file... [1/31/2018 9:18:53 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:53 AM] [1/31/2018 9:18:53 AM] Adding results... [1/31/2018 9:18:53 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_003.raw [1/31/2018 9:18:53 AM] [1/31/2018 9:18:56 AM] Updating peak statistics [1/31/2018 9:18:56 AM] Joining file C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\2018-01-30_PeptideMix1_QC_003_1887637636.raw.skyd [1/31/2018 9:18:56 AM] Saving file... [1/31/2018 9:18:56 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:18:56 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:18:56 AM] 2018-01-30_PeptideMix1_QC_004.raw is ready [1/31/2018 9:18:56 AM] Running SkylineRunner.exe with args: [1/31/2018 9:18:56 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_004.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:18:57 AM] Opening file... [1/31/2018 9:18:58 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:18:58 AM] [1/31/2018 9:18:58 AM] Adding results... [1/31/2018 9:18:58 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_004.raw [1/31/2018 9:18:58 AM] [1/31/2018 9:19:00 AM] Saving file... [1/31/2018 9:19:00 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:00 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:00 AM] 2018-01-30_PeptideMix1_QC_005.raw is ready [1/31/2018 9:19:00 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:00 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_005.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:01 AM] Opening file... [1/31/2018 9:19:02 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:02 AM] [1/31/2018 9:19:02 AM] Adding results... [1/31/2018 9:19:02 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_005.raw [1/31/2018 9:19:02 AM] [1/31/2018 9:19:04 AM] Saving file... [1/31/2018 9:19:04 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:04 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:04 AM] 2018-01-30_PeptideMix1_QC_006.raw is ready [1/31/2018 9:19:04 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:04 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_006.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:05 AM] Opening file... [1/31/2018 9:19:06 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:06 AM] [1/31/2018 9:19:06 AM] Adding results... [1/31/2018 9:19:06 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_006.raw [1/31/2018 9:19:06 AM] [1/31/2018 9:19:07 AM] Saving file... [1/31/2018 9:19:08 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:08 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:08 AM] 2018-01-30_PeptideMix1_Sol 04.raw is ready [1/31/2018 9:19:08 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:08 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 04.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:09 AM] Opening file... [1/31/2018 9:19:10 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:10 AM] [1/31/2018 9:19:10 AM] Adding results... [1/31/2018 9:19:10 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 04.raw [1/31/2018 9:19:10 AM] [1/31/2018 9:19:11 AM] Saving file... [1/31/2018 9:19:11 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:11 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:12 AM] 2018-01-30_PeptideMix1_Sol 05.raw is ready [1/31/2018 9:19:12 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:12 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 05.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:13 AM] Opening file... [1/31/2018 9:19:14 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:14 AM] [1/31/2018 9:19:14 AM] Adding results... [1/31/2018 9:19:14 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 05.raw [1/31/2018 9:19:14 AM] [1/31/2018 9:19:15 AM] Saving file... [1/31/2018 9:19:15 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:15 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:15 AM] 2018-01-30_PeptideMix1_Sol 06.raw is ready [1/31/2018 9:19:16 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:16 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 06.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:17 AM] Opening file... [1/31/2018 9:19:17 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:18 AM] [1/31/2018 9:19:18 AM] Adding results... [1/31/2018 9:19:18 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 06.raw [1/31/2018 9:19:18 AM] [1/31/2018 9:19:19 AM] Saving file... [1/31/2018 9:19:20 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:20 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:20 AM] 2018-01-30_PeptideMix1_Sol 07.raw is ready [1/31/2018 9:19:20 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:20 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 07.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save [1/31/2018 9:19:21 AM] Opening file... [1/31/2018 9:19:22 AM] File 24Aug2017_XS02.sky opened. [1/31/2018 9:19:22 AM] [1/31/2018 9:19:22 AM] Adding results... [1/31/2018 9:19:22 AM] 1. C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 07.raw [1/31/2018 9:19:22 AM] [1/31/2018 9:19:23 AM] Saving file... [1/31/2018 9:19:23 AM] File 24Aug2017_XS02.sky saved. [1/31/2018 9:19:23 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:23 AM] 2018-01-30_PeptideMix1_QC_001.raw is ready [1/31/2018 9:19:24 AM] Running SkylineRunner.exe with args: [1/31/2018 9:19:24 AM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_001.raw" --import-on-or-after=1/8/2018 8:02:52 AM --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [1/31/2018 9:19:25 AM] The username and password could not be authenticated with the panorama server. [1/31/2018 9:19:26 AM] Exiting... [1/31/2018 9:19:26 AM] SkylineRunner.exe exited successfully. [1/31/2018 9:19:26 AM] Finished importing existing files... [1/31/2018 9:19:26 AM] Importing new files... [1/31/2018 9:19:26 AM] Waiting for files... [2/16/2018 12:48:54 PM] Logging initialized... Name: TQ-XS 03 Enabled: True Panorama User: nikunj_tanna@waters.com Created: 11/8/20171:02 PM Modified: 1/8/20184:01 PM Main Settings Skyline file: C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky Folder to watch: C:\MassLynx\PeptideMix1-SystemCheck.pro\Data Include subfolders: True Filter Type: All Instrument: Waters Results window: 365 days Acquisition time: 5 minutes Panorama Settings Panorama server URL: https://panoramaweb.org/ Panorama user email: nikunj_tanna@waters.com Panorama folder: /Waters - System Suitability/TQ-XS 03 [2/16/2018 12:48:57 PM] Getting the acquisition date on the newest file imported into the Skyline document. [2/16/2018 12:48:57 PM] Running SkylineRunner.exe with args: [2/16/2018 12:48:57 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --report-conflict-resolution=overwrite --report-add="C:\Users\Administrator\AppData\Local\Apps\2.0\HTVZ6ZOT.T3J\MKDXL028.D0Q\auto..tion_e4141a2a22107248_0001.0001_57bf953e1a79aace\FileAcquisitionTime.skyr" --report-name="AcquisitionTimes" --report-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv" [2/16/2018 12:49:06 PM] The name 'AcquisitionTimes' already exists. [2/16/2018 12:49:06 PM] Resolving conflicts by overwriting. [2/16/2018 12:49:06 PM] Success! Imported Reports from FileAcquisitionTime [2/16/2018 12:49:06 PM] Opening file... [2/16/2018 12:49:07 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:08 PM] Exporting report AcquisitionTimes... [2/16/2018 12:49:08 PM] Report AcquisitionTimes exported successfully to C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv. [2/16/2018 12:49:09 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:09 PM] The most recent acquisition date in the Skyline document is 1/30/2018 12:00:34 PM [2/16/2018 12:49:09 PM] Initializing Panorama pinger... [2/16/2018 12:49:09 PM] Starting configuration... [2/16/2018 12:49:09 PM] Importing existing files... [2/16/2018 12:49:09 PM] Existing files found: 134 [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_001.raw was acquired (9/29/2017 9:50:46 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_002.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_003.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_004.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_005.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_006.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_007.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_008.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_009.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_010.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_011.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_012.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_013.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_014.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_015.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_016.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_017.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_018.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_019.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:50:59 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_015.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_016.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_017.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_018.raw was acquired (9/29/2017 9:51:01 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_019.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_020.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_021.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_022.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_023.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_024.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_025.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_026.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_027.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_028.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:51:05 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:51:09 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:51:10 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:51:12 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 01.raw was acquired (9/29/2017 10:55:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 02.raw was acquired (9/29/2017 11:01:35 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 03.raw was acquired (9/29/2017 11:07:19 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 04.raw was acquired (9/29/2017 11:13:05 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 05.raw was acquired (9/29/2017 11:18:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 01.raw was acquired (9/29/2017 11:24:33 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 02.raw was acquired (9/29/2017 11:30:17 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 03.raw was acquired (9/29/2017 11:36:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 04.raw was acquired (9/29/2017 11:41:45 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 05.raw was acquired (9/29/2017 11:47:29 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 06.raw was acquired (9/29/2017 11:53:13 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 06.raw was acquired (9/29/2017 11:58:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 07.raw was acquired (9/29/2017 12:04:43 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 08.raw was acquired (9/29/2017 12:10:28 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 01.raw was acquired (10/3/2017 1:59:52 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 02.raw was acquired (10/3/2017 2:05:38 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 03.raw was acquired (10/3/2017 2:11:22 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 04.raw was acquired (10/3/2017 2:17:05 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 05.raw was acquired (10/3/2017 2:22:49 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 01.raw was acquired (10/3/2017 2:28:33 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 02.raw was acquired (10/3/2017 2:34:16 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 03.raw was acquired (10/3/2017 2:40:00 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 04.raw was acquired (10/3/2017 2:45:44 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 05.raw was acquired (10/3/2017 2:51:29 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 06.raw was acquired (10/3/2017 2:57:13 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 06.raw was acquired (10/3/2017 3:02:56 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 07.raw was acquired (10/3/2017 3:08:40 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 08.raw was acquired (10/3/2017 3:14:25 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\RES CHECK.raw was acquired (1/2/2018 11:17:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_001.raw was acquired (1/3/2018 11:59:15 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_002.raw was acquired (1/3/2018 12:04:59 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_003.raw was acquired (1/3/2018 12:10:42 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_004.raw was acquired (1/3/2018 12:16:25 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_005.raw was acquired (1/3/2018 12:22:08 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_006.raw was acquired (1/3/2018 12:27:51 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_007.raw was acquired (1/3/2018 12:33:33 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_008.raw was acquired (1/3/2018 12:39:17 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_009.raw was acquired (1/3/2018 12:45:01 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_010.raw was acquired (1/3/2018 12:50:43 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_011.raw was acquired (1/3/2018 12:56:27 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_012.raw was acquired (1/3/2018 1:02:10 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 01.raw was acquired (1/8/2018 11:25:38 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 02.raw was acquired (1/8/2018 11:31:21 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 03.raw was acquired (1/8/2018 11:37:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_001.raw was acquired (1/8/2018 11:42:46 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_002.raw was acquired (1/8/2018 11:48:29 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_003.raw was acquired (1/8/2018 11:54:12 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_004.raw was acquired (1/8/2018 11:59:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_005.raw was acquired (1/8/2018 12:05:37 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_006.raw was acquired (1/8/2018 12:11:20 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_007.raw was acquired (1/8/2018 12:17:03 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_008.raw was acquired (1/8/2018 12:22:45 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_009.raw was acquired (1/8/2018 12:28:28 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_010.raw was acquired (1/8/2018 12:34:10 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_011.raw was acquired (1/8/2018 12:39:53 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_012.raw was acquired (1/8/2018 12:45:35 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 04.raw was acquired (1/8/2018 12:51:17 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 05.raw was acquired (1/8/2018 12:56:59 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 06.raw was acquired (1/8/2018 1:02:41 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 07.raw was acquired (1/8/2018 1:08:24 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [2/16/2018 12:49:09 PM] 2018-01-30_PeptideMix1_Sol 01.raw is ready [2/16/2018 12:49:09 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:09 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:10 PM] Opening file... [2/16/2018 12:49:11 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:12 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 01 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:12 PM] Saving file... [2/16/2018 12:49:12 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:12 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:12 PM] 2018-01-30_PeptideMix1_Sol 02.raw is ready [2/16/2018 12:49:12 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:12 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 02.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:13 PM] Opening file... [2/16/2018 12:49:14 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:14 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 02 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:14 PM] Saving file... [2/16/2018 12:49:14 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:15 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:15 PM] 2018-01-30_PeptideMix1_Sol 03.raw is ready [2/16/2018 12:49:15 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:15 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 03.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:16 PM] Opening file... [2/16/2018 12:49:17 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:17 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 03 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:17 PM] Saving file... [2/16/2018 12:49:17 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:17 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:17 PM] 2018-01-30_PeptideMix1_QC_002.raw is ready [2/16/2018 12:49:17 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:17 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_002.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:22 PM] Opening file... [2/16/2018 12:49:22 PM] Successfully pinged Panorama server. [2/16/2018 12:49:23 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:23 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_002 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:23 PM] Saving file... [2/16/2018 12:49:23 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:23 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:23 PM] 2018-01-30_PeptideMix1_QC_003.raw is ready [2/16/2018 12:49:23 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:23 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_003.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:24 PM] Opening file... [2/16/2018 12:49:25 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:25 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_003 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:25 PM] Saving file... [2/16/2018 12:49:25 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:25 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:26 PM] 2018-01-30_PeptideMix1_QC_004.raw is ready [2/16/2018 12:49:26 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:26 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_004.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:27 PM] Opening file... [2/16/2018 12:49:28 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:28 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_004 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:28 PM] Saving file... [2/16/2018 12:49:28 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:28 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:28 PM] 2018-01-30_PeptideMix1_QC_005.raw is ready [2/16/2018 12:49:28 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:28 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_005.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:29 PM] Opening file... [2/16/2018 12:49:30 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:31 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_005 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:31 PM] Saving file... [2/16/2018 12:49:31 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:31 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:31 PM] 2018-01-30_PeptideMix1_QC_006.raw is ready [2/16/2018 12:49:31 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:31 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_006.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:32 PM] Opening file... [2/16/2018 12:49:33 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:33 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_006 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:33 PM] Saving file... [2/16/2018 12:49:34 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:34 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:34 PM] 2018-01-30_PeptideMix1_Sol 04.raw is ready [2/16/2018 12:49:34 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:34 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 04.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:35 PM] Opening file... [2/16/2018 12:49:36 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:36 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 04 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:36 PM] Saving file... [2/16/2018 12:49:36 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:36 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:36 PM] 2018-01-30_PeptideMix1_Sol 05.raw is ready [2/16/2018 12:49:36 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:37 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 05.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:38 PM] Opening file... [2/16/2018 12:49:38 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:39 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 05 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:39 PM] Saving file... [2/16/2018 12:49:39 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:39 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:39 PM] 2018-01-30_PeptideMix1_Sol 06.raw is ready [2/16/2018 12:49:39 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:39 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 06.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:40 PM] Opening file... [2/16/2018 12:49:41 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:41 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 06 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:41 PM] Saving file... [2/16/2018 12:49:42 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:42 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:42 PM] 2018-01-30_PeptideMix1_Sol 07.raw is ready [2/16/2018 12:49:42 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:42 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 07.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [2/16/2018 12:49:43 PM] Opening file... [2/16/2018 12:49:44 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:44 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 07 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [2/16/2018 12:49:44 PM] Saving file... [2/16/2018 12:49:44 PM] File 24Aug2017_XS02.sky saved. [2/16/2018 12:49:44 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:44 PM] 2018-01-30_PeptideMix1_QC_001.raw is ready [2/16/2018 12:49:45 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:45 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_001.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [2/16/2018 12:49:47 PM] The username and password could not be authenticated with the panorama server. [2/16/2018 12:49:47 PM] Exiting... [2/16/2018 12:49:47 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:47 PM] Running SkylineRunner.exe with args: [2/16/2018 12:49:47 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --share-zip=24Aug2017_XS02_2018_01.sky.zip [2/16/2018 12:49:48 PM] Opening file... [2/16/2018 12:49:49 PM] File 24Aug2017_XS02.sky opened. [2/16/2018 12:49:50 PM] SkylineRunner.exe exited successfully. [2/16/2018 12:49:50 PM] Finished importing existing files... [2/16/2018 12:49:50 PM] Importing new files... [2/16/2018 12:49:50 PM] Waiting for files... [4/3/2018 2:49:58 PM] Logging initialized... Name: TQ-XS 03 Enabled: True Panorama User: nikunj_tanna@waters.com Created: 11/8/20171:02 PM Modified: 1/8/20184:01 PM Main Settings Skyline file: C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky Folder to watch: C:\MassLynx\PeptideMix1-SystemCheck.pro\Data Include subfolders: True Filter Type: All Instrument: Waters Results window: 365 days Acquisition time: 5 minutes Panorama Settings Panorama server URL: https://panoramaweb.org/ Panorama user email: nikunj_tanna@waters.com Panorama folder: /Waters - System Suitability/TQ-XS 03 [4/3/2018 2:50:02 PM] Getting the acquisition date on the newest file imported into the Skyline document. [4/3/2018 2:50:02 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:02 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --report-conflict-resolution=overwrite --report-add="C:\Users\Administrator\AppData\Local\Apps\2.0\HTVZ6ZOT.T3J\MKDXL028.D0Q\auto..tion_e4141a2a22107248_0001.0001_57bf953e1a79aace\FileAcquisitionTime.skyr" --report-name="AcquisitionTimes" --report-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv" [4/3/2018 2:50:08 PM] The name 'AcquisitionTimes' already exists. [4/3/2018 2:50:08 PM] Resolving conflicts by overwriting. [4/3/2018 2:50:09 PM] Success! Imported Reports from FileAcquisitionTime [4/3/2018 2:50:09 PM] Opening file... [4/3/2018 2:50:09 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:10 PM] Exporting report AcquisitionTimes... [4/3/2018 2:50:10 PM] Report AcquisitionTimes exported successfully to C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\AcquisitionTimes.csv. [4/3/2018 2:50:10 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:10 PM] The most recent acquisition date in the Skyline document is 1/30/2018 12:00:34 PM [4/3/2018 2:50:10 PM] Initializing Panorama pinger... [4/3/2018 2:50:10 PM] Starting configuration... [4/3/2018 2:50:10 PM] Importing existing files... [4/3/2018 2:50:10 PM] Existing files found: 134 [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_001.raw was acquired (9/29/2017 9:50:46 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_002.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_003.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_004.raw was acquired (9/29/2017 9:50:47 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_005.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_006.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_007.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_008.raw was acquired (9/29/2017 9:50:48 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_009.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_010.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_011.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_012.raw was acquired (9/29/2017 9:50:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_013.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_014.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_015.raw was acquired (9/29/2017 9:50:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_016.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_017.raw was acquired (9/29/2017 9:50:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_018.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\23Aug2017_PeptideMix1_019.raw was acquired (9/29/2017 9:50:53 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:50:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:50:55 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:50:56 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:50:57 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:50:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:50:59 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_015.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_016.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_017.raw was acquired (9/29/2017 9:51:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_018.raw was acquired (9/29/2017 9:51:01 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_019.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_020.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_021.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_022.raw was acquired (9/29/2017 9:51:02 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_023.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_024.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_025.raw was acquired (9/29/2017 9:51:03 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_026.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_027.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Aug2017_PeptideMix1_S02_028.raw was acquired (9/29/2017 9:51:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_001.raw was acquired (9/29/2017 9:51:05 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_002.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_003.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_004.raw was acquired (9/29/2017 9:51:06 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_005.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_006.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_007.raw was acquired (9/29/2017 9:51:07 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_008.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_009.raw was acquired (9/29/2017 9:51:08 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_010.raw was acquired (9/29/2017 9:51:09 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_011.raw was acquired (9/29/2017 9:51:10 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_012.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_013.raw was acquired (9/29/2017 9:51:11 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\25Sep2017_PeptideMix1_S02_014.raw was acquired (9/29/2017 9:51:12 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 01.raw was acquired (9/29/2017 10:55:50 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 02.raw was acquired (9/29/2017 11:01:35 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 03.raw was acquired (9/29/2017 11:07:19 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 04.raw was acquired (9/29/2017 11:13:05 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 05.raw was acquired (9/29/2017 11:18:49 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 01.raw was acquired (9/29/2017 11:24:33 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 02.raw was acquired (9/29/2017 11:30:17 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 03.raw was acquired (9/29/2017 11:36:00 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 04.raw was acquired (9/29/2017 11:41:45 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 05.raw was acquired (9/29/2017 11:47:29 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Inj 06.raw was acquired (9/29/2017 11:53:13 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 06.raw was acquired (9/29/2017 11:58:58 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 07.raw was acquired (9/29/2017 12:04:43 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-09-29_PeptideMix1_Sol 08.raw was acquired (9/29/2017 12:10:28 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 01.raw was acquired (10/3/2017 1:59:52 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 02.raw was acquired (10/3/2017 2:05:38 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 03.raw was acquired (10/3/2017 2:11:22 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 04.raw was acquired (10/3/2017 2:17:05 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 05.raw was acquired (10/3/2017 2:22:49 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 01.raw was acquired (10/3/2017 2:28:33 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 02.raw was acquired (10/3/2017 2:34:16 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 03.raw was acquired (10/3/2017 2:40:00 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 04.raw was acquired (10/3/2017 2:45:44 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 05.raw was acquired (10/3/2017 2:51:29 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Inj 06.raw was acquired (10/3/2017 2:57:13 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 06.raw was acquired (10/3/2017 3:02:56 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 07.raw was acquired (10/3/2017 3:08:40 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2017-10-03_PeptideMix1_Sol 08.raw was acquired (10/3/2017 3:14:25 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\RES CHECK.raw was acquired (1/2/2018 11:17:52 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_001.raw was acquired (1/3/2018 11:59:15 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_002.raw was acquired (1/3/2018 12:04:59 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_003.raw was acquired (1/3/2018 12:10:42 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_004.raw was acquired (1/3/2018 12:16:25 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_005.raw was acquired (1/3/2018 12:22:08 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_006.raw was acquired (1/3/2018 12:27:51 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_007.raw was acquired (1/3/2018 12:33:33 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_008.raw was acquired (1/3/2018 12:39:17 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_009.raw was acquired (1/3/2018 12:45:01 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_010.raw was acquired (1/3/2018 12:50:43 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_011.raw was acquired (1/3/2018 12:56:27 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\03Jan2018_PeptideMix1_QC_012.raw was acquired (1/3/2018 1:02:10 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 01.raw was acquired (1/8/2018 11:25:38 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 02.raw was acquired (1/8/2018 11:31:21 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 03.raw was acquired (1/8/2018 11:37:04 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_001.raw was acquired (1/8/2018 11:42:46 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_002.raw was acquired (1/8/2018 11:48:29 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_003.raw was acquired (1/8/2018 11:54:12 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_004.raw was acquired (1/8/2018 11:59:54 AM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_005.raw was acquired (1/8/2018 12:05:37 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_006.raw was acquired (1/8/2018 12:11:20 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_007.raw was acquired (1/8/2018 12:17:03 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_008.raw was acquired (1/8/2018 12:22:45 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_009.raw was acquired (1/8/2018 12:28:28 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_010.raw was acquired (1/8/2018 12:34:10 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_011.raw was acquired (1/8/2018 12:39:53 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_QC_012.raw was acquired (1/8/2018 12:45:35 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 04.raw was acquired (1/8/2018 12:51:17 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 05.raw was acquired (1/8/2018 12:56:59 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 06.raw was acquired (1/8/2018 1:02:41 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-08_PeptideMix1_Sol 07.raw was acquired (1/8/2018 1:08:24 PM) before the acquisition date (1/30/2018 12:00:34 PM) on the last imported file in the Skyline document. Skipping... [4/3/2018 2:50:10 PM] 2018-01-30_PeptideMix1_Sol 01.raw is ready [4/3/2018 2:50:10 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:10 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 01.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:12 PM] Opening file... [4/3/2018 2:50:13 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:14 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 01 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:14 PM] Saving file... [4/3/2018 2:50:14 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:14 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:14 PM] 2018-01-30_PeptideMix1_Sol 02.raw is ready [4/3/2018 2:50:14 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:14 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 02.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:15 PM] Opening file... [4/3/2018 2:50:16 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:16 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 02 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:16 PM] Saving file... [4/3/2018 2:50:16 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:17 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:17 PM] 2018-01-30_PeptideMix1_Sol 03.raw is ready [4/3/2018 2:50:17 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:17 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 03.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:18 PM] Opening file... [4/3/2018 2:50:19 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:19 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 03 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:19 PM] Saving file... [4/3/2018 2:50:19 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:19 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:19 PM] 2018-01-30_PeptideMix1_QC_002.raw is ready [4/3/2018 2:50:19 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:19 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_002.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:20 PM] Opening file... [4/3/2018 2:50:21 PM] Successfully pinged Panorama server. [4/3/2018 2:50:21 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:21 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_002 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:21 PM] Saving file... [4/3/2018 2:50:22 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:22 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:22 PM] 2018-01-30_PeptideMix1_QC_003.raw is ready [4/3/2018 2:50:22 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:22 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_003.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:23 PM] Opening file... [4/3/2018 2:50:24 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:24 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_003 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:24 PM] Saving file... [4/3/2018 2:50:24 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:24 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:24 PM] 2018-01-30_PeptideMix1_QC_004.raw is ready [4/3/2018 2:50:24 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:24 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_004.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:25 PM] Opening file... [4/3/2018 2:50:26 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:27 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_004 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:27 PM] Saving file... [4/3/2018 2:50:27 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:27 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:27 PM] 2018-01-30_PeptideMix1_QC_005.raw is ready [4/3/2018 2:50:27 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:27 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_005.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:28 PM] Opening file... [4/3/2018 2:50:29 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:29 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_005 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:29 PM] Saving file... [4/3/2018 2:50:29 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:29 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:30 PM] 2018-01-30_PeptideMix1_QC_006.raw is ready [4/3/2018 2:50:30 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:30 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_006.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:31 PM] Opening file... [4/3/2018 2:50:32 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:32 PM] Warning: The replicate 2018-01-30_PeptideMix1_QC_006 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:32 PM] Saving file... [4/3/2018 2:50:32 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:32 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:32 PM] 2018-01-30_PeptideMix1_Sol 04.raw is ready [4/3/2018 2:50:32 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:32 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 04.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:33 PM] Opening file... [4/3/2018 2:50:34 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:34 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 04 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:34 PM] Saving file... [4/3/2018 2:50:35 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:35 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:35 PM] 2018-01-30_PeptideMix1_Sol 05.raw is ready [4/3/2018 2:50:35 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:35 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 05.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:41 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 05 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:41 PM] Saving file... [4/3/2018 2:50:41 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:41 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:42 PM] 2018-01-30_PeptideMix1_Sol 06.raw is ready [4/3/2018 2:50:42 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:42 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 06.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:43 PM] Opening file... [4/3/2018 2:50:44 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:44 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 06 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:44 PM] Saving file... [4/3/2018 2:50:44 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:44 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:44 PM] 2018-01-30_PeptideMix1_Sol 07.raw is ready [4/3/2018 2:50:44 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:44 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_Sol 07.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save [4/3/2018 2:50:45 PM] Opening file... [4/3/2018 2:50:46 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:47 PM] Warning: The replicate 2018-01-30_PeptideMix1_Sol 07 already exists in the given document and the --import-append option is not specified. The replicate will not be added to the document. [4/3/2018 2:50:47 PM] Saving file... [4/3/2018 2:50:47 PM] File 24Aug2017_XS02.sky saved. [4/3/2018 2:50:47 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:47 PM] 2018-01-30_PeptideMix1_QC_001.raw is ready [4/3/2018 2:50:47 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:47 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --import-file="C:\MassLynx\PeptideMix1-SystemCheck.pro\Data\2018-01-30_PeptideMix1_QC_001.raw" --import-on-or-after=1/30/2018 12:00:34 PM --save --panorama-server="https://panoramaweb.org/" --panorama-folder="/Waters - System Suitability/TQ-XS 03" --panorama-username="nikunj_tanna@waters.com" [4/3/2018 2:50:51 PM] The username and password could not be authenticated with the panorama server. [4/3/2018 2:50:51 PM] Exiting... [4/3/2018 2:50:51 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:51 PM] Running SkylineRunner.exe with args: [4/3/2018 2:50:52 PM] --in="C:\MassLynx\PeptideMix1-SystemCheck.pro\Skyline Files\24Aug2017_XS02.sky" --share-zip=24Aug2017_XS02_2018_03.sky.zip [4/3/2018 2:50:53 PM] Opening file... [4/3/2018 2:50:53 PM] File 24Aug2017_XS02.sky opened. [4/3/2018 2:50:54 PM] SkylineRunner.exe exited successfully. [4/3/2018 2:50:54 PM] Finished importing existing files... [4/3/2018 2:50:54 PM] Importing new files... [4/3/2018 2:50:54 PM] Waiting for files...