20 Jan 2022 06:28:54,300 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
20 Jan 2022 06:28:54,304 INFO : Starting to import Skyline document from Healthy_serum_2022-01-20_15-28-53.sky.zip
20 Jan 2022 06:28:54,304 INFO : Expanding Healthy_serum.skyd
20 Jan 2022 06:28:54,327 INFO : Expanding Healthy_serum.sky.view
20 Jan 2022 06:28:54,329 INFO : Expanding Healthy_serum.sky
20 Jan 2022 06:28:54,334 INFO : Expanding Healthy_serum.skyl
20 Jan 2022 06:28:54,356 WARN : The version of this Skyline document is 21.1. This is newer than the highest supported version 20.22
20 Jan 2022 06:28:54,362 INFO : 2% Done
20 Jan 2022 06:28:54,377 DEBUG: Starting to load chromatogram headers
20 Jan 2022 06:28:54,380 DEBUG: Done loading chromatogram headers
20 Jan 2022 06:28:54,618 INFO : Inserting Citrulline
20 Jan 2022 06:28:54,625 INFO : 5% Done
20 Jan 2022 06:28:54,653 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,654 INFO : Inserting Ornithine
20 Jan 2022 06:28:54,660 INFO : 7% Done
20 Jan 2022 06:28:54,680 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,680 INFO : Inserting Glycine
20 Jan 2022 06:28:54,684 INFO : 10% Done
20 Jan 2022 06:28:54,702 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,702 INFO : Inserting Alanine
20 Jan 2022 06:28:54,707 INFO : 11% Done
20 Jan 2022 06:28:54,728 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,730 INFO : 12% Done
20 Jan 2022 06:28:54,730 INFO : Inserting Serine
20 Jan 2022 06:28:54,735 INFO : 14% Done
20 Jan 2022 06:28:54,756 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,756 INFO : Inserting Valine
20 Jan 2022 06:28:54,761 INFO : 16% Done
20 Jan 2022 06:28:54,780 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,780 INFO : Inserting Threonine
20 Jan 2022 06:28:54,784 INFO : 18% Done
20 Jan 2022 06:28:54,802 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,802 INFO : Inserting Isoleucine
20 Jan 2022 06:28:54,808 INFO : 21% Done
20 Jan 2022 06:28:54,827 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,827 INFO : Inserting Leucine
20 Jan 2022 06:28:54,839 INFO : 22% Done
20 Jan 2022 06:28:54,857 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,857 INFO : Inserting Histidine
20 Jan 2022 06:28:54,861 INFO : 25% Done
20 Jan 2022 06:28:54,878 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,878 INFO : Inserting Phenylalanine
20 Jan 2022 06:28:54,882 INFO : 27% Done
20 Jan 2022 06:28:54,899 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,900 INFO : Inserting Tyrosine
20 Jan 2022 06:28:54,903 INFO : 30% Done
20 Jan 2022 06:28:54,921 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,921 INFO : Inserting Tryptophan
20 Jan 2022 06:28:54,924 INFO : 32% Done
20 Jan 2022 06:28:54,942 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,942 INFO : Inserting SIL Tryptophan
20 Jan 2022 06:28:54,945 INFO : 34% Done
20 Jan 2022 06:28:54,963 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,963 INFO : Inserting Cysteine
20 Jan 2022 06:28:54,967 INFO : 36% Done
20 Jan 2022 06:28:54,984 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:54,984 INFO : Inserting Glutamine
20 Jan 2022 06:28:54,988 INFO : 38% Done
20 Jan 2022 06:28:55,006 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,006 INFO : Inserting Glutamate
20 Jan 2022 06:28:55,009 INFO : 41% Done
20 Jan 2022 06:28:55,027 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,027 INFO : Inserting Methionine
20 Jan 2022 06:28:55,030 INFO : 42% Done
20 Jan 2022 06:28:55,048 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,048 INFO : Inserting Proline
20 Jan 2022 06:28:55,052 INFO : 45% Done
20 Jan 2022 06:28:55,070 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,070 INFO : Inserting Aspartate
20 Jan 2022 06:28:55,074 INFO : 47% Done
20 Jan 2022 06:28:55,100 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,100 INFO : Inserting Lysine
20 Jan 2022 06:28:55,103 INFO : 50% Done
20 Jan 2022 06:28:55,130 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,130 INFO : Inserting Arginine
20 Jan 2022 06:28:55,134 INFO : 51% Done
20 Jan 2022 06:28:55,153 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,153 INFO : Inserting Asparagine
20 Jan 2022 06:28:55,157 INFO : 54% Done
20 Jan 2022 06:28:55,175 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,175 INFO : Inserting Methylamine
20 Jan 2022 06:28:55,179 INFO : 56% Done
20 Jan 2022 06:28:55,197 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,197 INFO : Inserting Putrescine
20 Jan 2022 06:28:55,201 INFO : 58% Done
20 Jan 2022 06:28:55,218 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,218 INFO : Inserting Histamine
20 Jan 2022 06:28:55,222 INFO : 61% Done
20 Jan 2022 06:28:55,239 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,239 INFO : Inserting Taurine
20 Jan 2022 06:28:55,243 INFO : 62% Done
20 Jan 2022 06:28:55,259 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,259 INFO : Inserting Tryptamie
20 Jan 2022 06:28:55,263 INFO : 65% Done
20 Jan 2022 06:28:55,281 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,281 INFO : Inserting Serotonin
20 Jan 2022 06:28:55,285 INFO : 67% Done
20 Jan 2022 06:28:55,306 INFO : 70% Done
20 Jan 2022 06:28:55,324 DEBUG: Total molecules inserted: 2
20 Jan 2022 06:28:55,324 INFO : Inserting Tyramine
20 Jan 2022 06:28:55,328 INFO : 71% Done
20 Jan 2022 06:28:55,345 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,345 INFO : Inserting Ethylamine
20 Jan 2022 06:28:55,348 INFO : 74% Done
20 Jan 2022 06:28:55,365 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,365 INFO : Inserting 2-phenethyl amine
20 Jan 2022 06:28:55,369 INFO : 76% Done
20 Jan 2022 06:28:55,386 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,386 INFO : Inserting Cadaverine
20 Jan 2022 06:28:55,390 INFO : 78% Done
20 Jan 2022 06:28:55,407 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,407 INFO : Inserting Ethanolamine
20 Jan 2022 06:28:55,411 INFO : 80% Done
20 Jan 2022 06:28:55,427 DEBUG: Total molecules inserted: 1
20 Jan 2022 06:28:55,428 INFO : Done parsing Skyline document.
20 Jan 2022 06:28:55,432 INFO : No group comparisons found.
20 Jan 2022 06:28:55,432 INFO : Calculating calibration curves
20 Jan 2022 06:28:55,433 DEBUG: Calculating calibration curve for Citrulline, 1 of 34
20 Jan 2022 06:28:55,443 INFO : 81% Done
20 Jan 2022 06:28:55,443 DEBUG: Calculating calibration curve for Ornithine, 2 of 34
20 Jan 2022 06:28:55,450 DEBUG: Calculating calibration curve for Glycine, 3 of 34
20 Jan 2022 06:28:55,458 INFO : 82% Done
20 Jan 2022 06:28:55,458 DEBUG: Calculating calibration curve for Alanine, 4 of 34
20 Jan 2022 06:28:55,465 DEBUG: Calculating calibration curve for Serine, 5 of 34
20 Jan 2022 06:28:55,473 INFO : 83% Done
20 Jan 2022 06:28:55,473 DEBUG: Calculating calibration curve for Valine, 6 of 34
20 Jan 2022 06:28:55,480 DEBUG: Calculating calibration curve for Threonine, 7 of 34
20 Jan 2022 06:28:55,488 INFO : 84% Done
20 Jan 2022 06:28:55,488 DEBUG: Calculating calibration curve for Isoleucine, 8 of 34
20 Jan 2022 06:28:55,495 DEBUG: Calculating calibration curve for Leucine, 9 of 34
20 Jan 2022 06:28:55,503 INFO : 85% Done
20 Jan 2022 06:28:55,503 DEBUG: Calculating calibration curve for Histidine, 10 of 34
20 Jan 2022 06:28:55,510 DEBUG: Calculating calibration curve for Phenylalanine, 11 of 34
20 Jan 2022 06:28:55,518 INFO : 86% Done
20 Jan 2022 06:28:55,518 DEBUG: Calculating calibration curve for Tyrosine, 12 of 34
20 Jan 2022 06:28:55,525 DEBUG: Calculating calibration curve for Tryptophan, 13 of 34
20 Jan 2022 06:28:55,532 INFO : 87% Done
20 Jan 2022 06:28:55,533 DEBUG: Calculating calibration curve for SIL Tryptophan, 14 of 34
20 Jan 2022 06:28:55,539 DEBUG: Calculating calibration curve for Cysteine, 15 of 34
20 Jan 2022 06:28:55,551 INFO : 88% Done
20 Jan 2022 06:28:55,551 DEBUG: Calculating calibration curve for Glutamine, 16 of 34
20 Jan 2022 06:28:55,558 DEBUG: Calculating calibration curve for Glutamate, 17 of 34
20 Jan 2022 06:28:55,566 INFO : 89% Done
20 Jan 2022 06:28:55,566 DEBUG: Calculating calibration curve for Methionine, 18 of 34
20 Jan 2022 06:28:55,575 INFO : 90% Done
20 Jan 2022 06:28:55,575 DEBUG: Calculating calibration curve for Proline, 19 of 34
20 Jan 2022 06:28:55,581 DEBUG: Calculating calibration curve for Aspartate, 20 of 34
20 Jan 2022 06:28:55,590 INFO : 91% Done
20 Jan 2022 06:28:55,590 DEBUG: Calculating calibration curve for Lysine, 21 of 34
20 Jan 2022 06:28:55,597 DEBUG: Calculating calibration curve for Arginine, 22 of 34
20 Jan 2022 06:28:55,605 INFO : 92% Done
20 Jan 2022 06:28:55,605 DEBUG: Calculating calibration curve for Asparagine, 23 of 34
20 Jan 2022 06:28:55,612 DEBUG: Calculating calibration curve for Methylamine, 24 of 34
20 Jan 2022 06:28:55,620 INFO : 93% Done
20 Jan 2022 06:28:55,620 DEBUG: Calculating calibration curve for Putrescine, 25 of 34
20 Jan 2022 06:28:55,627 DEBUG: Calculating calibration curve for Histamine, 26 of 34
20 Jan 2022 06:28:55,636 INFO : 94% Done
20 Jan 2022 06:28:55,636 DEBUG: Calculating calibration curve for Taurine, 27 of 34
20 Jan 2022 06:28:55,643 DEBUG: Calculating calibration curve for Tryptamie, 28 of 34
20 Jan 2022 06:28:55,651 INFO : 95% Done
20 Jan 2022 06:28:55,651 DEBUG: Calculating calibration curve for Serotonin, 29 of 34
20 Jan 2022 06:28:55,664 DEBUG: Calculating calibration curve for Tyramine, 30 of 34
20 Jan 2022 06:28:55,672 INFO : 96% Done
20 Jan 2022 06:28:55,672 DEBUG: Calculating calibration curve for Ethylamine, 31 of 34
20 Jan 2022 06:28:55,679 DEBUG: Calculating calibration curve for 2-phenethyl amine, 32 of 34
20 Jan 2022 06:28:55,687 INFO : 97% Done
20 Jan 2022 06:28:55,687 DEBUG: Calculating calibration curve for Cadaverine, 33 of 34
20 Jan 2022 06:28:55,694 DEBUG: Calculating calibration curve for Ethanolamine, 34 of 34
20 Jan 2022 06:28:55,702 INFO : 98% Done
20 Jan 2022 06:28:55,709 INFO : Done calculating calibration curves.
20 Jan 2022 06:28:56,466 INFO : Creating and populating temp tables for Proportion values
20 Jan 2022 06:28:56,494 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jan 2022 06:28:56,549 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jan 2022 06:28:56,591 INFO : Cleaning up temp tables
20 Jan 2022 06:28:56,780 INFO : Completed import of Skyline document from Healthy_serum_2022-01-20_15-28-53.sky.zip
20 Jan 2022 06:28:56,784 INFO : 100% Done
20 Jan 2022 06:28:56,823 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'