27 Feb 2023 14:32:10,487 INFO : Validating data for a ProteomeXchange submission.
27 Feb 2023 14:32:10,488 INFO : =======================================
27 Feb 2023 14:32:10,498 DEBUG: Resetting Job ID: 7aca70c3-991c-103b-b327-fea6ddf5f3bc
27 Feb 2023 14:32:10,519 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
27 Feb 2023 14:32:10,520 INFO : Validating data for experiment Id: 1552, validation Id: 357
27 Feb 2023 14:32:10,707 INFO : Validating data for 27 Skyline documents in 4 folders
27 Feb 2023 14:32:12,977 INFO : Sample file validation for Skyline document: 220524_ApoE_HoofnagleLab_Precision_Day1.sky.zip
27 Feb 2023 14:32:12,977 INFO :   Found all sample files.
27 Feb 2023 14:32:14,313 INFO : Sample file validation for Skyline document: 220526_ApoE_HoofnagleLab_Precision_Day2.sky.zip
27 Feb 2023 14:32:14,313 INFO :   Found all sample files.
27 Feb 2023 14:32:16,132 INFO : Sample file validation for Skyline document: 220527_ApoE_HoofnagleLab_Precision_Day3.sky.zip
27 Feb 2023 14:32:16,132 INFO :   Found all sample files.
27 Feb 2023 14:32:17,658 INFO : Sample file validation for Skyline document: 220531_ApoE_HoofnagleLab_Precision_Day4.sky.zip
27 Feb 2023 14:32:17,658 INFO :   Found all sample files.
27 Feb 2023 14:32:19,779 INFO : Sample file validation for Skyline document: 220601_ApoE_HoofnagleLab_Precision_Day5.sky.zip
27 Feb 2023 14:32:19,779 INFO :   Found all sample files.
27 Feb 2023 14:32:23,478 INFO : Sample file validation for Skyline document: 220524_ApoE_HoofnagleLab_Parallelism_Day1.sky.zip
27 Feb 2023 14:32:23,478 INFO :   Found all sample files.
27 Feb 2023 14:32:26,905 INFO : Sample file validation for Skyline document: 220526_ApoE_HoofnagleLab_Parallelism_Day2.sky.zip
27 Feb 2023 14:32:26,905 INFO :   Found all sample files.
27 Feb 2023 14:32:30,313 INFO : Sample file validation for Skyline document: 220531_ApoE_HoofnagleLab_Parallelism_Day3.sky.zip
27 Feb 2023 14:32:30,313 INFO :   Found all sample files.
27 Feb 2023 14:32:30,338 INFO : Sample file validation for Skyline document: 220524_ApoE_HoofnagleLab_LLOQ_Day1.sky.zip
27 Feb 2023 14:32:30,338 INFO :   Found all sample files.
27 Feb 2023 14:32:30,401 INFO : Sample file validation for Skyline document: 220526_ApoE_HoofnagleLab_LLOQ_day2.sky.zip
27 Feb 2023 14:32:30,401 INFO :   Found all sample files.
27 Feb 2023 14:32:30,458 INFO : Sample file validation for Skyline document: 220531_ApoE_HoofnagleLab_LLOQ_day3.sky.zip
27 Feb 2023 14:32:30,458 INFO :   Found all sample files.
27 Feb 2023 14:32:31,560 INFO : Sample file validation for Skyline document: 220714_ApoE_Hoofnagle_Interferences.sky.zip
27 Feb 2023 14:32:31,560 INFO :   Found all sample files.
27 Feb 2023 14:32:33,052 INFO : Sample file validation for Skyline document: 220602_ApoE_HoofnagleLab_Protein stability_Part 1.sky.zip
27 Feb 2023 14:32:33,052 INFO :   Found all sample files.
27 Feb 2023 14:32:33,601 INFO : Sample file validation for Skyline document: 220615_ApoE_HoofnagleLab_Peptide stability.sky.zip
27 Feb 2023 14:32:33,601 INFO :   Found all sample files.
27 Feb 2023 14:32:33,867 INFO : Sample file validation for Skyline document: 220615_ApoE_HoofnagleLab_Protein stability_Part 2.sky.zip
27 Feb 2023 14:32:33,867 INFO :   Found all sample files.
27 Feb 2023 14:32:37,927 INFO : Sample file validation for Skyline document: 220608_ApoE_HoofnagleLab_Method application_Part 1.sky.zip
27 Feb 2023 14:32:37,927 INFO :   Found all sample files.
27 Feb 2023 14:32:42,978 INFO : Sample file validation for Skyline document: 220608_ApoE_HoofnagleLab_Method application_Part 2.sky.zip
27 Feb 2023 14:32:42,978 INFO :   Found all sample files.
27 Feb 2023 14:32:43,765 INFO : Sample file validation for Skyline document: 220602_ApoE_HoofnagleLab_Method application_Part 5.sky.zip
27 Feb 2023 14:32:43,765 INFO :   Found all sample files.
27 Feb 2023 14:32:47,474 INFO : Sample file validation for Skyline document: 220610_ApoE_HoofnagleLab_Method application_Part 3.sky.zip
27 Feb 2023 14:32:47,476 INFO :   Found all sample files.
27 Feb 2023 14:32:51,229 INFO : Sample file validation for Skyline document: 4220610_ApoE_HoofnagleLab_Method application_Part 4.sky.zip
27 Feb 2023 14:32:51,229 INFO :   Found all sample files.
27 Feb 2023 14:32:52,795 INFO : Sample file validation for Skyline document: 220330_ApoE_HoofnagleLab_Analyte Free Matrix_Day 1.sky.zip
27 Feb 2023 14:32:52,795 INFO :   Found all sample files.
27 Feb 2023 14:32:53,914 INFO : Sample file validation for Skyline document: 220405_ApoE_HoofnagleLab_Analyte Free Matrix_Day 2.sky.zip
27 Feb 2023 14:32:53,914 INFO :   Found all sample files.
27 Feb 2023 14:32:57,124 INFO : Sample file validation for Skyline document: 220429_ApoE_HoofnagleLab_Matrix effect_Internal standard Buffer.sky.zip
27 Feb 2023 14:32:57,124 INFO :   Found all sample files.
27 Feb 2023 14:32:57,809 INFO : Sample file validation for Skyline document: 220429_ApoE_HoofnagleLab_Matrix effect_Calibrator preparation.sky.zip
27 Feb 2023 14:32:57,809 INFO :   Found all sample files.
27 Feb 2023 14:33:00,051 INFO : Sample file validation for Skyline document: 220808_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 1_2023-02-27_14-07-32.sky.zip
27 Feb 2023 14:33:00,051 INFO :   Found all sample files.
27 Feb 2023 14:33:01,847 INFO : Sample file validation for Skyline document: 220809_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 2_2023-02-27_14-08-30.sky.zip
27 Feb 2023 14:33:01,847 INFO :   Found all sample files.
27 Feb 2023 14:33:02,092 INFO : Sample file validation for Skyline document: 220811_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 3_2023-02-27_14-08-54.sky.zip
27 Feb 2023 14:33:02,092 INFO :   Found all sample files.
27 Feb 2023 14:33:02,283 INFO : Modifications validation:
27 Feb 2023 14:33:02,283 INFO : VALID MODIFICATIONS:
27 Feb 2023 14:33:02,283 INFO : 3656: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
27 Feb 2023 14:33:02,283 INFO :     220808_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 1_2023-02-27_14-07-32.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220809_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 2_2023-02-27_14-08-30.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220811_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 3_2023-02-27_14-08-54.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220330_ApoE_HoofnagleLab_Analyte Free Matrix_Day 1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220429_ApoE_HoofnagleLab_Matrix effect_Calibrator preparation.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220524_ApoE_HoofnagleLab_Precision_Day1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220405_ApoE_HoofnagleLab_Analyte Free Matrix_Day 2.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220429_ApoE_HoofnagleLab_Matrix effect_Internal standard Buffer.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220531_ApoE_HoofnagleLab_Precision_Day4.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220526_ApoE_HoofnagleLab_Precision_Day2.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220527_ApoE_HoofnagleLab_Precision_Day3.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220601_ApoE_HoofnagleLab_Precision_Day5.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220524_ApoE_HoofnagleLab_Parallelism_Day1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220531_ApoE_HoofnagleLab_Parallelism_Day3.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220524_ApoE_HoofnagleLab_LLOQ_Day1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220526_ApoE_HoofnagleLab_Parallelism_Day2.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220714_ApoE_Hoofnagle_Interferences.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220602_ApoE_HoofnagleLab_Protein stability_Part 1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220526_ApoE_HoofnagleLab_LLOQ_day2.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220531_ApoE_HoofnagleLab_LLOQ_day3.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220608_ApoE_HoofnagleLab_Method application_Part 1.sky.zip
27 Feb 2023 14:33:02,283 INFO :     220615_ApoE_HoofnagleLab_Peptide stability.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220615_ApoE_HoofnagleLab_Protein stability_Part 2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220610_ApoE_HoofnagleLab_Method application_Part 3.sky.zip
27 Feb 2023 14:33:02,284 INFO :     4220610_ApoE_HoofnagleLab_Method application_Part 4.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220608_ApoE_HoofnagleLab_Method application_Part 2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220602_ApoE_HoofnagleLab_Method application_Part 5.sky.zip
27 Feb 2023 14:33:02,284 INFO : 3657: Label:13C(6)15N(4) (C-term R): 
27 Feb 2023 14:33:02,284 INFO :     220808_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 1_2023-02-27_14-07-32.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220809_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 2_2023-02-27_14-08-30.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220811_ApoE_HoofnagleLab_Value assignment secondary calibrator_Day 3_2023-02-27_14-08-54.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220330_ApoE_HoofnagleLab_Analyte Free Matrix_Day 1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220429_ApoE_HoofnagleLab_Matrix effect_Calibrator preparation.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220524_ApoE_HoofnagleLab_Precision_Day1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220405_ApoE_HoofnagleLab_Analyte Free Matrix_Day 2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220429_ApoE_HoofnagleLab_Matrix effect_Internal standard Buffer.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220531_ApoE_HoofnagleLab_Precision_Day4.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220526_ApoE_HoofnagleLab_Precision_Day2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220527_ApoE_HoofnagleLab_Precision_Day3.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220601_ApoE_HoofnagleLab_Precision_Day5.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220524_ApoE_HoofnagleLab_Parallelism_Day1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220531_ApoE_HoofnagleLab_Parallelism_Day3.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220524_ApoE_HoofnagleLab_LLOQ_Day1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220526_ApoE_HoofnagleLab_Parallelism_Day2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220714_ApoE_Hoofnagle_Interferences.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220602_ApoE_HoofnagleLab_Protein stability_Part 1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220526_ApoE_HoofnagleLab_LLOQ_day2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220531_ApoE_HoofnagleLab_LLOQ_day3.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220608_ApoE_HoofnagleLab_Method application_Part 1.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220615_ApoE_HoofnagleLab_Peptide stability.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220615_ApoE_HoofnagleLab_Protein stability_Part 2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220610_ApoE_HoofnagleLab_Method application_Part 3.sky.zip
27 Feb 2023 14:33:02,284 INFO :     4220610_ApoE_HoofnagleLab_Method application_Part 4.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220608_ApoE_HoofnagleLab_Method application_Part 2.sky.zip
27 Feb 2023 14:33:02,284 INFO :     220602_ApoE_HoofnagleLab_Method application_Part 5.sky.zip
27 Feb 2023 14:33:02,284 INFO : INVALID MODIFICATIONS (No Unimod ID):
27 Feb 2023 14:33:02,285 INFO : Skyline documents in the experiment do not contain any spectral libraries.
27 Feb 2023 14:33:02,285 INFO : Spectral library validation complete.
27 Feb 2023 14:33:02,286 INFO : Data validation is complete. Status is Complete
27 Feb 2023 14:33:02,286 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'