TPAD_VL_CSF_PRTC_APOA1_2024-01-07_23-01-46.sky.zip: /TPAD2.0/Project 1/Ventricular vs lumbar CSF testing

TPAD_VL_CSF_PRTC_APOA1_2024-01-07_23-01-46.sky.zip

Ventricular vs lumbar CSF testing

Document Summary

TPAD_VL_CSF_PRTC_APOA1_2024-01-07_23-01-46.sky.zip 1 version

3 proteins, 46 peptides, 46 precursors, 424 transitions - 12 replicates - Skyline-daily (64-bit) 23.1.1.268 (c58f1f56e)

Precursor List

Protein Note/Annotations

peptides

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Note/Annotations	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Note/Annotations	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Transition Count Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CE Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	DP Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
SSAAPPPPPR		0	975.5138		SSAAPPPPPR		heavy	2+	493.7683	985.5220	7	17.5679
GISNEGQNASIK		0	1216.6048		GISNEGQNASIK		heavy	2+	613.3168	1224.6190	7	21.1843
HVLTSIGEK		0	982.5447		HVLTSIGEK		heavy	2+	496.2867	990.5589	7	17.6734
DIPVPKPK		0	892.5382		DIPVPKPK		heavy	2+	451.2835	900.5524	7	16.3233
IGDYAGIK		0	835.4440		IGDYAGIK		heavy	2+	422.7364	843.4582	7	15.4669
TASEFDSAIAQDK		0	1381.6361		TASEFDSAIAQDK		heavy	2+	695.8324	1389.6503	7	23.6598
SAAGAFGPELSR		0	1161.5778		SAAGAFGPELSR		heavy	2+	586.8003	1171.5861	7	20.3589
ELGQSGVDTYLQTK		0	1537.7624		ELGQSGVDTYLQTK		heavy	2+	773.8956	1545.7766	7	26.0017
GLILVGGYGTR		0	1104.6291		GLILVGGYGTR		heavy	2+	558.3260	1114.6374	7	19.5047
GILFVGSGVSGGEEGAR		0	1590.8002		GILFVGSGVSGGEEGAR		heavy	2+	801.4115	1600.8085	7	26.7972
SFANQPLEVVYSK		0	1480.7562		SFANQPLEVVYSK		heavy	2+	745.3925	1488.7704	8	25.1466
LTILEELR		0	985.5808		LTILEELR		heavy	2+	498.8018	995.5891	7	17.7189
NGFILDGFPR		0	1134.5822		NGFILDGFPR		heavy	2+	573.3025	1144.5905	7	19.9540
ELASGLSFPVGFK		0	1350.7184		ELASGLSFPVGFK		heavy	2+	680.3736	1358.7326	8	23.1960
LSSEAPALFQFDLK		0	1564.8137		LSSEAPALFQFDLK		heavy	2+	787.4212	1572.8279	7	26.4074

sp|P02647|APOA1_HUMAN

Apolipoprotein A-I OS=Homo sapiens OX=9606 GN=APOA1 PE=1 SV=1

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Note/Annotations	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Note/Annotations	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Transition Count Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CE Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	DP Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
DLATVYVDVLK		0	1234.6809		DLATVYVDVLK		light	2+	618.3477	1234.6809	11	21.4554
DYVSQFEGSALGK		0	1399.6620		DYVSQFEGSALGK		light	2+	700.8383	1399.6620	13	23.9301
LLDNWDSVTSTFSK		0	1611.7781		LLDNWDSVTSTFSK		light	2+	806.8963	1611.7781	14	27.1119
EQLGPVTQEFWDNLEK		0	1931.9265		EQLGPVTQEFWDNLEK		light	2+	966.9705	1931.9265	13	31.9141
VQPYLDDFQK		0	1251.6136		VQPYLDDFQK		light	2+	626.8141	1251.6136	10	21.7094
WQEEMELYR		0	1282.5652		WQEEMELYR		light	2+	642.2899	1282.5652	9	22.1737
AELQEGAR		0	872.4352		AELQEGAR		light	2+	437.2249	872.4352	8	16.0217
LHELQEK		0	895.4763		LHELQEK		light	2+	448.7454	895.4763	7	16.3674
LSPLGEEMR		0	1030.5117		LSPLGEEMR		light	2+	516.2631	1030.5117	9	18.3929
THLAPYSDELR		0	1300.6412		THLAPYSDELR		light	2+	651.3279	1300.6412	11	22.4448
LAEYHAK		0	830.4287		LAEYHAK		light	2+	416.2216	830.4287	7	15.3916
ATEHLSTLSEK		0	1214.6143		ATEHLSTLSEK		light	2+	608.3144	1214.6143	11	21.1544
AKPALEDLR		0	1011.5713		AKPALEDLR		light	2+	506.7929	1011.5713	9	18.1088
QGLLPVLESFK		0	1229.7020		QGLLPVLESFK		light	2+	615.8583	1229.7020	11	21.3807
VSFLSALEEYTK		0	1385.7078		VSFLSALEEYTK		light	2+	693.8612	1385.7078	12	23.7208

sp|P02647|APOA1_HUMAN

Apolipoprotein A-I OS=Homo sapiens OX=9606 GN=APOA1 PE=1 SV=1

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Note/Annotations	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Note/Annotations	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Transition Count Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	CE Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	DP Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
DLATVYVDVLK		0	1234.6809		DLATVYVDVLK		heavy	2+	624.3299	1246.6453	11	21.4554
DYVSQFEGSALGK		0	1399.6620		DYVSQFEGSALGK		heavy	2+	708.3160	1414.6175	13	23.9301
LLDNWDSVTSTFSK		0	1611.7781		LLDNWDSVTSTFSK		heavy	2+	815.3711	1628.7276	14	27.1119
EQLGPVTQEFWDNLEK		0	1931.9265		EQLGPVTQEFWDNLEK		heavy	2+	977.4394	1952.8642	13	31.9141
VQPYLDDFQK		0	1251.6136		VQPYLDDFQK		heavy	2+	633.2948	1264.5750	10	21.7094
WQEEMELYR		0	1282.5652		WQEEMELYR		heavy	2+	649.2691	1296.5237	9	22.1737
AELQEGAR		0	872.4352		AELQEGAR		heavy	2+	443.2071	884.3996	8	16.0217
LHELQEK		0	895.4763		LHELQEK		heavy	2+	454.2291	906.4437	7	16.3674
LSPLGEEMR		0	1030.5117		LSPLGEEMR		heavy	2+	522.2454	1042.4762	9	18.3929
AHVDALR		0	780.4242		AHVDALR		heavy	2+	397.2016	792.3887	7	14.6416
THLAPYSDELR		0	1300.6412		THLAPYSDELR		heavy	2+	659.3041	1316.5937	11	22.4448
LAEYHAK		0	830.4287		LAEYHAK		heavy	2+	421.2068	840.3990	7	15.3916
ATEHLSTLSEK		0	1214.6143		ATEHLSTLSEK		heavy	2+	615.2937	1228.5728	11	21.1544
AKPALEDLR		0	1011.5713		AKPALEDLR		heavy	2+	513.2737	1024.5328	9	18.1088
QGLLPVLESFK		0	1229.7020		QGLLPVLESFK		heavy	2+	622.3390	1242.6634	11	21.3807
VSFLSALEEYTK		0	1385.7078		VSFLSALEEYTK		heavy	2+	700.3419	1398.6693	12	23.7208