23 Jun 2024 01:25:36,268 DEBUG: Resetting Job ID: e74367cc-1367-103d-86c9-dc22ffcd69ea
23 Jun 2024 01:25:36,286 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
23 Jun 2024 01:25:36,287 INFO : Starting to import Skyline document from 2024-0622-TBI Plasma EV_2024-06-23_01-26-36.sky.zip
23 Jun 2024 01:25:36,287 INFO : Expanding Enolase-PRTC.blib
23 Jun 2024 01:25:36,289 INFO : Expanding 2024-0622-TBI Plasma EV.skyd
23 Jun 2024 01:25:36,436 INFO : Expanding 2024-0622-TBI Plasma EV.sky
23 Jun 2024 01:25:36,441 INFO : Reading Skyline file, 2024-0622-TBI Plasma EV.sky, to determine if the TransitionChromInfos in the document should be stored...
23 Jun 2024 01:25:36,448 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
23 Jun 2024 01:25:36,448 WARN : The version of this Skyline document is 23.13. This is newer than the highest supported version 23.1
23 Jun 2024 01:25:36,450 INFO : 2% Done
23 Jun 2024 01:25:36,510 DEBUG: Starting to load chromatogram headers
23 Jun 2024 01:25:36,511 DEBUG: Done loading chromatogram headers
23 Jun 2024 01:25:36,704 INFO : Inserting iRT standards
23 Jun 2024 01:25:36,705 INFO : Inserting sp|P00924|ENO1_YEAST
23 Jun 2024 01:25:36,714 INFO : 5% Done
23 Jun 2024 01:25:36,744 INFO : 10% Done
23 Jun 2024 01:25:36,771 INFO : 13% Done
23 Jun 2024 01:25:36,793 INFO : 16% Done
23 Jun 2024 01:25:36,812 DEBUG: Total peptides inserted: 4
23 Jun 2024 01:25:36,812 INFO : Inserting PRTC
23 Jun 2024 01:25:36,818 INFO : 19% Done
23 Jun 2024 01:25:36,838 INFO : 22% Done
23 Jun 2024 01:25:36,858 INFO : 25% Done
23 Jun 2024 01:25:36,878 INFO : 28% Done
23 Jun 2024 01:25:36,898 INFO : 31% Done
23 Jun 2024 01:25:36,918 INFO : 34% Done
23 Jun 2024 01:25:36,939 INFO : 37% Done
23 Jun 2024 01:25:36,960 INFO : 40% Done
23 Jun 2024 01:25:36,981 INFO : 42% Done
23 Jun 2024 01:25:37,002 INFO : 46% Done
23 Jun 2024 01:25:37,023 INFO : 48% Done
23 Jun 2024 01:25:37,043 INFO : 51% Done
23 Jun 2024 01:25:37,065 INFO : 55% Done
23 Jun 2024 01:25:37,087 INFO : 57% Done
23 Jun 2024 01:25:37,103 DEBUG: Total peptides inserted: 14
23 Jun 2024 01:25:37,103 INFO : Inserting sp|P00761|TRYP_PIG
23 Jun 2024 01:25:37,109 INFO : 60% Done
23 Jun 2024 01:25:37,126 DEBUG: Total peptides inserted: 1
23 Jun 2024 01:25:37,126 INFO : Done parsing Skyline document.
23 Jun 2024 01:25:37,126 INFO : Updating previously imported data for 15 old sample files.
23 Jun 2024 01:25:37,126 DEBUG: Found data for the following old sample files in the QC folder:
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-001.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-003.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G11-7562-11.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G9-MM-09.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G2-7555-02.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-GPF1-Chrlib-01.raw
23 Jun 2024 01:25:37,126 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G4-7626-04.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G6-7438-06.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G10-TBI-10.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G5-7638-05.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-002.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G3-7375-03.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G8-7406-08.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G7-7485-07.raw
23 Jun 2024 01:25:37,127 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G1-7638-01.raw
23 Jun 2024 01:25:41,359 INFO : 98% Done
23 Jun 2024 01:25:41,359 INFO : Done updating previously imported sample file data.
23 Jun 2024 01:25:42,113 INFO : All the related sampleFiles for /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-23_00-56-47.sky.zip have been updated with newer data.
23 Jun 2024 01:25:42,113 INFO : Deleting /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-23_00-56-47.sky.zip
23 Jun 2024 01:25:42,113 INFO : Deleting directory /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-23_00-56-47
23 Jun 2024 01:25:42,113 INFO : Creating and populating temp tables for Proportion values
23 Jun 2024 01:25:42,119 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
23 Jun 2024 01:25:42,131 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
23 Jun 2024 01:25:42,139 INFO : Cleaning up temp tables
23 Jun 2024 01:25:42,435 INFO : Completed import of Skyline document from 2024-0622-TBI Plasma EV_2024-06-23_01-26-36.sky.zip
23 Jun 2024 01:25:42,437 INFO : 100% Done
23 Jun 2024 01:25:42,460 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'