22 Jun 2024 21:42:09,558 DEBUG: Resetting Job ID: 917e7571-1348-103d-86c9-dc22ffcd69ea
22 Jun 2024 21:42:09,575 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
22 Jun 2024 21:42:09,576 INFO : Starting to import Skyline document from 2024-0622-TBI Plasma EV_2024-06-22_21-43-09.sky.zip
22 Jun 2024 21:42:09,576 INFO : Expanding Enolase-PRTC.blib
22 Jun 2024 21:42:09,578 INFO : Expanding 2024-0622-TBI Plasma EV.skyd
22 Jun 2024 21:42:09,663 INFO : Expanding 2024-0622-TBI Plasma EV.sky
22 Jun 2024 21:42:09,667 INFO : Reading Skyline file, 2024-0622-TBI Plasma EV.sky, to determine if the TransitionChromInfos in the document should be stored...
22 Jun 2024 21:42:09,672 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
22 Jun 2024 21:42:09,672 WARN : The version of this Skyline document is 23.13. This is newer than the highest supported version 23.1
22 Jun 2024 21:42:09,674 INFO : 2% Done
22 Jun 2024 21:42:09,708 DEBUG: Starting to load chromatogram headers
22 Jun 2024 21:42:09,709 DEBUG: Done loading chromatogram headers
22 Jun 2024 21:42:09,870 INFO : Inserting iRT standards
22 Jun 2024 21:42:09,871 INFO : Inserting sp|P00924|ENO1_YEAST
22 Jun 2024 21:42:09,878 INFO : 5% Done
22 Jun 2024 21:42:09,899 INFO : 10% Done
22 Jun 2024 21:42:09,919 INFO : 13% Done
22 Jun 2024 21:42:09,934 INFO : 17% Done
22 Jun 2024 21:42:09,948 DEBUG: Total peptides inserted: 4
22 Jun 2024 21:42:09,948 INFO : Inserting PRTC
22 Jun 2024 21:42:09,953 INFO : 19% Done
22 Jun 2024 21:42:09,966 INFO : 22% Done
22 Jun 2024 21:42:09,979 INFO : 25% Done
22 Jun 2024 21:42:09,993 INFO : 28% Done
22 Jun 2024 21:42:10,006 INFO : 31% Done
22 Jun 2024 21:42:10,019 INFO : 34% Done
22 Jun 2024 21:42:10,033 INFO : 37% Done
22 Jun 2024 21:42:10,047 INFO : 40% Done
22 Jun 2024 21:42:10,061 INFO : 43% Done
22 Jun 2024 21:42:10,076 INFO : 46% Done
22 Jun 2024 21:42:10,092 INFO : 48% Done
22 Jun 2024 21:42:10,106 INFO : 51% Done
22 Jun 2024 21:42:10,119 INFO : 55% Done
22 Jun 2024 21:42:10,134 INFO : 57% Done
22 Jun 2024 21:42:10,145 DEBUG: Total peptides inserted: 14
22 Jun 2024 21:42:10,145 INFO : Inserting sp|P00761|TRYP_PIG
22 Jun 2024 21:42:10,150 INFO : 60% Done
22 Jun 2024 21:42:10,161 DEBUG: Total peptides inserted: 1
22 Jun 2024 21:42:10,161 INFO : Done parsing Skyline document.
22 Jun 2024 21:42:10,161 INFO : Updating previously imported data for 8 old sample files.
22 Jun 2024 21:42:10,161 DEBUG: Found data for the following old sample files in the QC folder:
22 Jun 2024 21:42:10,161 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G5-7638-05.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-002.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-001.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-003.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G2-7555-02.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G3-7375-03.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G4-7626-04.raw
22 Jun 2024 21:42:10,162 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-G1-7638-01.raw
22 Jun 2024 21:42:12,142 INFO : 98% Done
22 Jun 2024 21:42:12,142 INFO : Done updating previously imported sample file data.
22 Jun 2024 21:42:12,883 INFO : All the related sampleFiles for /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_21-13-17.sky.zip have been updated with newer data.
22 Jun 2024 21:42:12,883 INFO : Deleting /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_21-13-17.sky.zip
22 Jun 2024 21:42:12,883 INFO : Deleting directory /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_21-13-17
22 Jun 2024 21:42:12,883 INFO : Creating and populating temp tables for Proportion values
22 Jun 2024 21:42:12,888 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
22 Jun 2024 21:42:12,895 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
22 Jun 2024 21:42:12,899 INFO : Cleaning up temp tables
22 Jun 2024 21:42:13,182 INFO : Completed import of Skyline document from 2024-0622-TBI Plasma EV_2024-06-22_21-43-09.sky.zip
22 Jun 2024 21:42:13,183 INFO : 100% Done
22 Jun 2024 21:42:13,205 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'