22 Jun 2024 19:13:17,337 DEBUG: Resetting Job ID: da9bfe06-1333-103d-86c9-dc22ffcd69ea
22 Jun 2024 19:13:17,361 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
22 Jun 2024 19:13:17,362 INFO : Starting to import Skyline document from 2024-0622-TBI Plasma EV_2024-06-22_19-14-17.sky.zip
22 Jun 2024 19:13:17,362 INFO : Expanding Enolase-PRTC.blib
22 Jun 2024 19:13:17,364 INFO : Expanding 2024-0622-TBI Plasma EV.skyd
22 Jun 2024 19:13:17,406 INFO : Expanding 2024-0622-TBI Plasma EV.sky
22 Jun 2024 19:13:17,408 INFO : Reading Skyline file, 2024-0622-TBI Plasma EV.sky, to determine if the TransitionChromInfos in the document should be stored...
22 Jun 2024 19:13:17,411 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
22 Jun 2024 19:13:17,412 WARN : The version of this Skyline document is 23.13. This is newer than the highest supported version 23.1
22 Jun 2024 19:13:17,414 INFO : 3% Done
22 Jun 2024 19:13:17,429 DEBUG: Starting to load chromatogram headers
22 Jun 2024 19:13:17,429 DEBUG: Done loading chromatogram headers
22 Jun 2024 19:13:17,602 INFO : Inserting iRT standards
22 Jun 2024 19:13:17,603 INFO : Inserting sp|P00924|ENO1_YEAST
22 Jun 2024 19:13:17,609 INFO : 6% Done
22 Jun 2024 19:13:17,624 INFO : 11% Done
22 Jun 2024 19:13:17,639 INFO : 14% Done
22 Jun 2024 19:13:17,649 INFO : 17% Done
22 Jun 2024 19:13:17,657 DEBUG: Total peptides inserted: 4
22 Jun 2024 19:13:17,658 INFO : Inserting PRTC
22 Jun 2024 19:13:17,661 INFO : 20% Done
22 Jun 2024 19:13:17,670 INFO : 23% Done
22 Jun 2024 19:13:17,679 INFO : 26% Done
22 Jun 2024 19:13:17,688 INFO : 29% Done
22 Jun 2024 19:13:17,697 INFO : 31% Done
22 Jun 2024 19:13:17,707 INFO : 34% Done
22 Jun 2024 19:13:17,717 INFO : 37% Done
22 Jun 2024 19:13:17,726 INFO : 40% Done
22 Jun 2024 19:13:17,736 INFO : 43% Done
22 Jun 2024 19:13:17,746 INFO : 46% Done
22 Jun 2024 19:13:17,756 INFO : 49% Done
22 Jun 2024 19:13:17,765 INFO : 52% Done
22 Jun 2024 19:13:17,774 INFO : 55% Done
22 Jun 2024 19:13:17,784 INFO : 58% Done
22 Jun 2024 19:13:17,791 DEBUG: Total peptides inserted: 14
22 Jun 2024 19:13:17,791 INFO : Inserting sp|P00761|TRYP_PIG
22 Jun 2024 19:13:17,795 INFO : 60% Done
22 Jun 2024 19:13:17,803 DEBUG: Total peptides inserted: 1
22 Jun 2024 19:13:17,803 INFO : Done parsing Skyline document.
22 Jun 2024 19:13:17,803 INFO : Updating previously imported data for 3 old sample files.
22 Jun 2024 19:13:17,803 DEBUG: Found data for the following old sample files in the QC folder:
22 Jun 2024 19:13:17,803 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-002.raw
22 Jun 2024 19:13:17,804 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-001.raw
22 Jun 2024 19:13:17,804 DEBUG: D:\mjm\2024-0622-TBI Plasma EV\Ast-0622-TBI-Pilot-Equil-003.raw
22 Jun 2024 19:13:17,832 INFO : 98% Done
22 Jun 2024 19:13:17,832 INFO : Done updating previously imported sample file data.
22 Jun 2024 19:13:18,643 INFO : All the related sampleFiles for /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_18-16-40.sky.zip have been updated with newer data.
22 Jun 2024 19:13:18,643 INFO : Deleting /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_18-16-40.sky.zip
22 Jun 2024 19:13:18,643 INFO : Deleting directory /data/labkey/files/TPAD2.0/Project 1/2024-0622 TBI Pilot-Plasma EV/QC 2024-0622 TBI Pilot-Plasma EV/@files/2024-0622-TBI Plasma EV_2024-06-22_18-16-40
22 Jun 2024 19:13:18,643 INFO : Creating and populating temp tables for Proportion values
22 Jun 2024 19:13:18,648 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
22 Jun 2024 19:13:18,654 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
22 Jun 2024 19:13:18,660 INFO : Cleaning up temp tables
22 Jun 2024 19:13:18,925 INFO : Completed import of Skyline document from 2024-0622-TBI Plasma EV_2024-06-22_19-14-17.sky.zip
22 Jun 2024 19:13:18,926 INFO : 100% Done
22 Jun 2024 19:13:18,951 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'