04 Apr 2017 11:25:45,223 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'
04 Apr 2017 11:25:45,225 INFO : Starting to import Skyline document from orbi_urine_filtered_resGrouped_2017-04-04_10-15-28.sky.zip
04 Apr 2017 11:25:45,225 INFO : Expanding blankHRM.irtdb
04 Apr 2017 11:25:45,225 INFO : Expanding orbi_urine_filtered_resGrouped.skyd
04 Apr 2017 11:26:10,197 INFO : Expanding orbi_urine_filtered_resGrouped.sky.view
04 Apr 2017 11:26:10,198 INFO : Expanding orbi_urine_filtered_resGrouped.sky
04 Apr 2017 11:26:10,332 WARN : The version of this Skyline document is 3.62. This is newer than the highest supported version 3.6
04 Apr 2017 11:26:11,882 INFO : Inserting Biognosys standards
04 Apr 2017 11:26:12,512 INFO : Inserting sp|Q9H8L6|MMRN2_HUMAN
04 Apr 2017 11:26:12,517 INFO : Inserting sp|O75439|MPPB_HUMAN
04 Apr 2017 11:26:12,555 INFO : Inserting sp|O75352|MPU1_HUMAN
04 Apr 2017 11:26:12,600 INFO : Inserting sp|P58546|MTPN_HUMAN
04 Apr 2017 11:26:12,635 INFO : Inserting sp|Q5SSG8|MUC21_HUMAN
04 Apr 2017 11:26:12,654 INFO : Inserting sp|Q13421|MSLN_HUMAN
04 Apr 2017 11:26:12,692 INFO : Inserting sp|Q8NHP6|MSPD2_HUMAN
04 Apr 2017 11:26:12,715 INFO : Inserting sp|P26038|MOES_HUMAN
04 Apr 2017 11:26:12,753 INFO : Inserting sp|Q00325|MPCP_HUMAN
04 Apr 2017 11:26:12,771 INFO : Inserting sp|Q9UBG0|MRC2_HUMAN
04 Apr 2017 11:26:12,807 INFO : Inserting sp|Q9UJ68|MSRA_HUMAN
04 Apr 2017 11:26:12,812 INFO : Inserting sp|P15941|MUC1_HUMAN
04 Apr 2017 11:26:12,873 INFO : Inserting sp|Q6W4X9|MUC6_HUMAN
04 Apr 2017 11:26:12,906 INFO : Inserting sp|Q7RTY1|MOT9_HUMAN
04 Apr 2017 11:26:12,929 INFO : Inserting sp|Q86U44|MTA70_HUMAN
04 Apr 2017 11:26:13,013 INFO : Inserting sp|Q49AM1|MTEF2_HUMAN
04 Apr 2017 11:26:13,427 INFO : Failed to complete task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'
04 Apr 2017 11:26:13,429 ERROR: Uncaught exception in PipelineJob: (DONE) Skyline document import - orbi_urine_filtered_resGrouped_2017-04-04_10-15-28.sky.zip
java.lang.IllegalStateException: 'orbi_centroid_HRM_template_resGrouped' library not found in settings.
at org.labkey.targetedms.SkylineDocImporter.insertPrecursor(SkylineDocImporter.java:1268)
at org.labkey.targetedms.SkylineDocImporter.insertPeptideOrSmallMolecule(SkylineDocImporter.java:1064)
at org.labkey.targetedms.SkylineDocImporter.insertPeptideGroup(SkylineDocImporter.java:947)
at org.labkey.targetedms.SkylineDocImporter.importSkylineDoc(SkylineDocImporter.java:530)
at org.labkey.targetedms.SkylineDocImporter.importRun(SkylineDocImporter.java:153)
at org.labkey.targetedms.pipeline.TargetedMSImportTask.run(TargetedMSImportTask.java:61)
at org.labkey.api.pipeline.PipelineJob.runActiveTask(PipelineJob.java:710)
at org.labkey.api.pipeline.PipelineJob.run(PipelineJob.java:941)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)