30 Apr 2025 21:22:20,973 INFO : Copying experiment "Selecting the Correct Autosampler Vial and Insert to Improve Reproducibility and Accuracy in Mass Spectrometry Analyses" from folder /UNC - Baker Lab/Vial Comparison Falls to /Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls
30 Apr 2025 21:22:20,973 INFO : =======================================
30 Apr 2025 21:22:20,987 DEBUG: Resetting Job ID: f54abdd3-0870-103e-9c0d-1cc91aa94300
30 Apr 2025 21:22:21,004 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
30 Apr 2025 21:22:21,004 INFO : 
30 Apr 2025 21:22:21,004 INFO : Exporting experiment.
30 Apr 2025 21:22:22,795 INFO : Exporting files metadata.
30 Apr 2025 21:22:22,795 DEBUG: [/UNC - Baker Lab/Vial Comparison Falls]  Writing files metadata to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/export
30 Apr 2025 21:22:22,797 INFO : 
30 Apr 2025 21:22:22,797 INFO : Experiment export completed successfully.
30 Apr 2025 21:22:22,797 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
30 Apr 2025 21:22:22,815 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
30 Apr 2025 21:22:22,815 INFO : 
30 Apr 2025 21:22:22,815 INFO : Importing experiment.
30 Apr 2025 21:22:22,816 DEBUG: [/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls] Importing folder properties from: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/export
30 Apr 2025 21:22:22,817 INFO : Loading folder properties (folder type, settings and active modules)
30 Apr 2025 21:22:22,817 DEBUG: [/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls] Folder type: Targeted MS
30 Apr 2025 21:22:22,817 DEBUG: [/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls] Active modules: TargetedMS, Query, PanoramaPublic, FileContent, Search, Protein, Core, Assay, Issues, Experiment, Pipeline, Wiki, Announcements, API
30 Apr 2025 21:22:22,852 INFO : Done importing folder properties (folder type, settings and active modules)
30 Apr 2025 21:22:22,853 INFO : Loading container specific module properties
30 Apr 2025 21:22:22,859 INFO : Done importing container specific module properties
30 Apr 2025 21:22:22,860 INFO : Loading queries
30 Apr 2025 21:22:22,862 INFO : 1 query imported
30 Apr 2025 21:22:22,862 INFO : Done importing queries
30 Apr 2025 21:22:22,862 INFO : Loading etl definitions
30 Apr 2025 21:22:22,863 INFO : Loading wikis
30 Apr 2025 21:22:22,864 INFO : 0 wikis imported
30 Apr 2025 21:22:22,864 INFO : Done importing wikis
30 Apr 2025 21:22:22,865 INFO : Starting Data Class Importer
30 Apr 2025 21:22:22,865 INFO : No types XAR file to process.
30 Apr 2025 21:22:22,865 INFO : Finished Data Class Importer
30 Apr 2025 21:22:22,865 INFO : Starting to copy files to @files
30 Apr 2025 21:22:22,865 INFO : Copied 0 files to @files
30 Apr 2025 21:22:22,866 INFO : Starting to copy files to @assayfiles
30 Apr 2025 21:22:22,866 INFO : Copied 0 files to @assayfiles
30 Apr 2025 21:22:22,866 INFO : Ensuring exp.data rows exist for imported files
30 Apr 2025 21:22:22,915 INFO : Starting Sample Type Importer
30 Apr 2025 21:22:22,915 INFO : No types XAR file to process.
30 Apr 2025 21:22:22,915 INFO : Finished Sample Type Importer
30 Apr 2025 21:22:22,916 INFO : Loading xar
30 Apr 2025 21:22:23,328 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip'
30 Apr 2025 21:22:23,330 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Core'
30 Apr 2025 21:22:23,331 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Output'
30 Apr 2025 21:22:23,331 DEBUG: Protocol import complete
30 Apr 2025 21:22:23,332 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-14998:Selecting+the+Correct+Autosampler+Vial+and+Insert+to+Improve+Reproducibility+and+Accuracy+in+Mass+Spectrometry+Analyses'
30 Apr 2025 21:22:23,332 DEBUG: Experiment/Run group import complete
30 Apr 2025 21:22:23,338 DEBUG: Protocol action set import complete
30 Apr 2025 21:22:23,343 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip'
30 Apr 2025 21:22:23,347 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14998:f45890c5-0760-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,349 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14998:f458908b-0760-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,349 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Core'
30 Apr 2025 21:22:23,350 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Output'
30 Apr 2025 21:22:23,351 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14998:f45891d3-0760-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,354 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip'
30 Apr 2025 21:22:23,357 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14998:68b4a3a5-0761-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,359 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14998:68b4a36d-0761-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,359 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Core'
30 Apr 2025 21:22:23,360 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14998:TargetedMS.ImportSkyZip.Output'
30 Apr 2025 21:22:23,361 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14998:68b4a4a7-0761-103e-9c0d-1cc91aa94300'
30 Apr 2025 21:22:23,367 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263466/Vial%20Comparison%20Pre%20v2_2025-04-29_15-49-25/Vial%20Comparison%20Pre%20v2.skyd into the system
30 Apr 2025 21:22:23,367 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263466/Vial%20Comparison%20Pre%20v2_2025-04-29_15-49-25/Vial%20Comparison%20Pre%20v2.skyd into the system
30 Apr 2025 21:22:23,367 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263466/Vial%20Comparison%20Pre%20v2_2025-04-29_15-49-25.sky.zip into the system
30 Apr 2025 21:22:23,368 INFO : Starting import from Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:23,370 INFO : Starting to import Skyline document from Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:23,370 INFO : Expanding Vial Comparison Pre v2.skyd
30 Apr 2025 21:22:23,549 INFO : Expanding Vial Comparison Pre v2.sky.view
30 Apr 2025 21:22:23,549 INFO : Expanding Vial Comparison Pre v2.sky
30 Apr 2025 21:22:23,551 INFO : Expanding Vial Comparison Pre v2.skyl
30 Apr 2025 21:22:23,552 INFO : Reading Skyline file, Vial Comparison Pre v2.sky, to determine if the TransitionChromInfos in the document should be stored...
30 Apr 2025 21:22:23,554 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
30 Apr 2025 21:22:23,555 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
30 Apr 2025 21:22:23,556 INFO : 3% Done
30 Apr 2025 21:22:23,556 INFO : Copying SKYD to temp directory for import purposes
30 Apr 2025 21:22:23,594 INFO : Copying complete
30 Apr 2025 21:22:23,595 DEBUG: Starting to load chromatogram headers
30 Apr 2025 21:22:23,598 DEBUG: Done loading chromatogram headers
30 Apr 2025 21:22:23,797 INFO : Inserting PFAS (-) SIL
30 Apr 2025 21:22:23,799 INFO : 8% Done
30 Apr 2025 21:22:23,809 INFO : 12% Done
30 Apr 2025 21:22:23,816 INFO : 16% Done
30 Apr 2025 21:22:23,824 INFO : 21% Done
30 Apr 2025 21:22:23,831 INFO : 25% Done
30 Apr 2025 21:22:23,838 INFO : 28% Done
30 Apr 2025 21:22:23,845 INFO : 31% Done
30 Apr 2025 21:22:23,852 INFO : 35% Done
30 Apr 2025 21:22:23,860 INFO : 39% Done
30 Apr 2025 21:22:23,867 INFO : 43% Done
30 Apr 2025 21:22:23,874 INFO : 48% Done
30 Apr 2025 21:22:23,881 INFO : 51% Done
30 Apr 2025 21:22:23,889 INFO : 55% Done
30 Apr 2025 21:22:23,895 INFO : 59% Done
30 Apr 2025 21:22:23,902 INFO : 63% Done
30 Apr 2025 21:22:23,909 INFO : 68% Done
30 Apr 2025 21:22:23,917 INFO : 72% Done
30 Apr 2025 21:22:23,923 INFO : 75% Done
30 Apr 2025 21:22:23,931 INFO : 79% Done
30 Apr 2025 21:22:23,938 INFO : 83% Done
30 Apr 2025 21:22:23,944 INFO : 87% Done
30 Apr 2025 21:22:23,951 INFO : 91% Done
30 Apr 2025 21:22:23,958 INFO : 95% Done
30 Apr 2025 21:22:23,965 INFO : 98% Done
30 Apr 2025 21:22:23,971 DEBUG: Total molecules inserted: 24
30 Apr 2025 21:22:23,971 INFO : Done parsing Skyline document.
30 Apr 2025 21:22:23,997 INFO : Creating and populating temp tables for Proportion values
30 Apr 2025 21:22:24,001 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
30 Apr 2025 21:22:24,014 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
30 Apr 2025 21:22:24,022 INFO : Cleaning up temp tables
30 Apr 2025 21:22:24,344 INFO : Deleted temp copy of SKYD file
30 Apr 2025 21:22:24,344 INFO : Completed import of Skyline document from Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:24,346 INFO : 100% Done
30 Apr 2025 21:22:24,349 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263466/Vial%20Comparison%20Pre%20v2_2025-04-29_15-49-25.sky.zip into the system
30 Apr 2025 21:22:24,349 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263467/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily)_2025-04-29_15-52-29/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily).skyd into the system
30 Apr 2025 21:22:24,349 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263467/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily)_2025-04-29_15-52-29/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily).skyd into the system
30 Apr 2025 21:22:24,349 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263467/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily)_2025-04-29_15-52-29.sky.zip into the system
30 Apr 2025 21:22:24,350 INFO : Starting import from Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:24,351 INFO : Starting to import Skyline document from Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:24,352 INFO : Expanding Vial Comparison Post 01152025 v1 (not daily).skyd
30 Apr 2025 21:22:24,433 INFO : Expanding Vial Comparison Post 01152025 v1 (not daily).sky.view
30 Apr 2025 21:22:24,433 INFO : Expanding Vial Comparison Post 01152025 v1 (not daily).sky
30 Apr 2025 21:22:24,434 INFO : Expanding Vial Comparison Post 01152025 v1 (not daily).skyl
30 Apr 2025 21:22:24,435 INFO : Reading Skyline file, Vial Comparison Post 01152025 v1 (not daily).sky, to determine if the TransitionChromInfos in the document should be stored...
30 Apr 2025 21:22:24,437 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
30 Apr 2025 21:22:24,438 WARN : The version of this Skyline document is 24.1. This is newer than the highest supported version 23.1
30 Apr 2025 21:22:24,439 INFO : 4% Done
30 Apr 2025 21:22:24,439 INFO : Copying SKYD to temp directory for import purposes
30 Apr 2025 21:22:24,466 INFO : Copying complete
30 Apr 2025 21:22:24,466 DEBUG: Starting to load chromatogram headers
30 Apr 2025 21:22:24,469 DEBUG: Done loading chromatogram headers
30 Apr 2025 21:22:24,692 INFO : Inserting PFAS (-) SIL
30 Apr 2025 21:22:24,696 INFO : 9% Done
30 Apr 2025 21:22:24,703 INFO : 14% Done
30 Apr 2025 21:22:24,709 INFO : 18% Done
30 Apr 2025 21:22:24,715 INFO : 22% Done
30 Apr 2025 21:22:24,721 INFO : 25% Done
30 Apr 2025 21:22:24,727 INFO : 29% Done
30 Apr 2025 21:22:24,733 INFO : 33% Done
30 Apr 2025 21:22:24,739 INFO : 37% Done
30 Apr 2025 21:22:24,744 INFO : 41% Done
30 Apr 2025 21:22:24,750 INFO : 46% Done
30 Apr 2025 21:22:24,756 INFO : 49% Done
30 Apr 2025 21:22:24,762 INFO : 54% Done
30 Apr 2025 21:22:24,768 INFO : 58% Done
30 Apr 2025 21:22:24,774 INFO : 62% Done
30 Apr 2025 21:22:24,780 INFO : 66% Done
30 Apr 2025 21:22:24,786 INFO : 71% Done
30 Apr 2025 21:22:24,792 INFO : 74% Done
30 Apr 2025 21:22:24,798 INFO : 78% Done
30 Apr 2025 21:22:24,804 INFO : 80% Done
30 Apr 2025 21:22:24,810 INFO : 82% Done
30 Apr 2025 21:22:24,815 INFO : 86% Done
30 Apr 2025 21:22:24,821 INFO : 90% Done
30 Apr 2025 21:22:24,826 INFO : 95% Done
30 Apr 2025 21:22:24,832 INFO : 98% Done
30 Apr 2025 21:22:24,838 DEBUG: Total molecules inserted: 24
30 Apr 2025 21:22:24,838 INFO : Done parsing Skyline document.
30 Apr 2025 21:22:24,857 INFO : Creating and populating temp tables for Proportion values
30 Apr 2025 21:22:24,861 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
30 Apr 2025 21:22:24,871 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
30 Apr 2025 21:22:24,879 INFO : Cleaning up temp tables
30 Apr 2025 21:22:25,159 INFO : Deleted temp copy of SKYD file
30 Apr 2025 21:22:25,159 INFO : Completed import of Skyline document from Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:25,162 INFO : 100% Done
30 Apr 2025 21:22:25,164 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/UNC%20Baker%20Lab%20-%20Vial%20Comparison%20Falls/@files/export/xar/experiments_and_runs.xar.exploded/Run263467/Vial%20Comparison%20Post%2001152025%20v1%20(not%20daily)_2025-04-29_15-52-29.sky.zip into the system
30 Apr 2025 21:22:25,611 INFO : Done importing xar
30 Apr 2025 21:22:25,612 INFO : Loading pages and webpart properties
30 Apr 2025 21:22:25,656 INFO : Done importing 3 page(s) with 5 webpart(s)
30 Apr 2025 21:22:25,656 INFO : Loading File Browser config
30 Apr 2025 21:22:25,656 INFO : Done importing File Browser config
30 Apr 2025 21:22:25,657 INFO : Starting Sample Status Data import
30 Apr 2025 21:22:25,657 INFO : No sample types XAR file to process.
30 Apr 2025 21:22:25,657 INFO : Finished importing Sample Status Data
30 Apr 2025 21:22:25,663 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
30 Apr 2025 21:22:25,664 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
30 Apr 2025 21:22:25,665 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
30 Apr 2025 21:22:25,665 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
30 Apr 2025 21:22:25,665 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
30 Apr 2025 21:22:25,665 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
30 Apr 2025 21:22:25,667 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
30 Apr 2025 21:22:25,671 INFO : Moving files to folder /Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls and creating symlinks
30 Apr 2025 21:22:25,672 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25
30 Apr 2025 21:22:25,673 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyl to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyl
30 Apr 2025 21:22:25,675 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyl targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyl
30 Apr 2025 21:22:25,676 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyd to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyd
30 Apr 2025 21:22:25,676 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyd targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyd
30 Apr 2025 21:22:25,678 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky.view to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky.view
30 Apr 2025 21:22:25,678 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky.view targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky.view
30 Apr 2025 21:22:25,680 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky
30 Apr 2025 21:22:25,680 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.sky
30 Apr 2025 21:22:25,681 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:25,682 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:25,684 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/RawFiles
30 Apr 2025 21:22:25,684 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29
30 Apr 2025 21:22:25,685 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyl to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyl
30 Apr 2025 21:22:25,686 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyl targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyl
30 Apr 2025 21:22:25,687 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyd to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyd
30 Apr 2025 21:22:25,687 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyd targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyd
30 Apr 2025 21:22:25,689 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky.view to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky.view
30 Apr 2025 21:22:25,689 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky.view targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky.view
30 Apr 2025 21:22:25,690 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky
30 Apr 2025 21:22:25,691 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).sky
30 Apr 2025 21:22:25,692 DEBUG: Moved file /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip to /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:25,693 DEBUG: Created symlink /data/labkey/files/UNC - Baker Lab/Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip targeting /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:25,693 INFO : Aligning data files urls in folder: /Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls
30 Apr 2025 21:22:25,695 DEBUG: Setting filePathRoot on copied run: Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files
30 Apr 2025 21:22:25,697 DEBUG: Setting dataFileUri on copied data: Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25.sky.zip
30 Apr 2025 21:22:25,698 DEBUG: Setting dataFileUri on copied data: Vial Comparison Pre v2.skyd to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Pre v2_2025-04-29_15-49-25/Vial Comparison Pre v2.skyd
30 Apr 2025 21:22:25,699 DEBUG: Setting filePathRoot on copied run: Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files
30 Apr 2025 21:22:25,700 DEBUG: Setting dataFileUri on copied data: Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29.sky.zip
30 Apr 2025 21:22:25,701 DEBUG: Setting dataFileUri on copied data: Vial Comparison Post 01152025 v1 (not daily).skyd to: /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/Vial Comparison Post 01152025 v1 (not daily)_2025-04-29_15-52-29/Vial Comparison Post 01152025 v1 (not daily).skyd
30 Apr 2025 21:22:25,702 INFO : Updating skydDataIds in folder: /Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls
30 Apr 2025 21:22:25,703 INFO : Importing files metadata.
30 Apr 2025 21:22:25,703 DEBUG: [/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls]  Reading files metadata from /data/labkey/files/Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls/@files/export
30 Apr 2025 21:22:25,704 INFO : 
30 Apr 2025 21:22:25,704 INFO : Experiment import completed successfully.
30 Apr 2025 21:22:25,704 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
30 Apr 2025 21:22:25,720 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
30 Apr 2025 21:22:25,720 INFO : 
30 Apr 2025 21:22:25,720 INFO : Checking for library folders.
30 Apr 2025 21:22:25,722 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
30 Apr 2025 21:22:25,735 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
30 Apr 2025 21:22:25,735 INFO : 
30 Apr 2025 21:22:25,735 INFO : Finishing up experiment copy.
30 Apr 2025 21:22:25,736 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2025/UNC Baker Lab - Vial Comparison Falls
30 Apr 2025 21:22:25,736 INFO : Setting version on new experiment to 1
30 Apr 2025 21:22:25,738 INFO : Updating permanent link to point to the new copy of the data.
30 Apr 2025 21:22:25,763 INFO : Removing copy permissions given to Panorama Public
30 Apr 2025 21:22:25,767 INFO : Adding read permissions to all users that are folder admins in the source folder.
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to jndodds@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to rlberes@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to akstewar@ncsu.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to mrfoster@ncsu.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to guozhi@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to erinmsb@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to melanie.odenkirk@colostate.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to kikirkwo@ncsu.edu
30 Apr 2025 21:22:25,768 INFO : Assigning ReaderRole to aboatman@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning PanoramaPublicSubmitterRole to jndodds@unc.edu
30 Apr 2025 21:22:25,768 INFO : Assigning PanoramaPublicSubmitterRole to erinmsb@unc.edu
30 Apr 2025 21:22:25,776 INFO : User jndodds@unc.edu is already a member of group Panorama Public Submitters
30 Apr 2025 21:22:25,776 INFO : User erinmsb@unc.edu is already a member of group Panorama Public Submitters
30 Apr 2025 21:22:25,776 INFO : Updating the 'Raw Data' tab configuration
30 Apr 2025 21:22:25,777 INFO : Making folder public.
30 Apr 2025 21:22:25,779 INFO : Hiding the Data Pipeline tab.
30 Apr 2025 21:22:25,782 INFO : Updating Submission. Setting copiedExperimentId to 2063
30 Apr 2025 21:22:27,289 INFO : Assigning a DOI.
30 Apr 2025 21:22:28,002 INFO : Assigned DOI: 10.6069/9bjq-3h62
30 Apr 2025 21:22:28,036 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'