08 Feb 2025 19:05:37,915 INFO : Copying experiment "Carrageenan-sulfatases from the marine bacterium Zobellia galactanivorans Dsij" from folder /U Greifswald - Institute of Pharmacy/Zobellia sulfatases to /Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases
08 Feb 2025 19:05:37,915 INFO : =======================================
08 Feb 2025 19:05:37,928 DEBUG: Resetting Job ID: 29e4fec4-c8c0-103d-a2e3-1cc91aa99e00
08 Feb 2025 19:05:37,945 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
08 Feb 2025 19:05:37,946 INFO : 
08 Feb 2025 19:05:37,946 INFO : Exporting experiment.
08 Feb 2025 19:05:40,247 INFO : Exporting files metadata.
08 Feb 2025 19:05:40,247 DEBUG: [/U Greifswald - Institute of Pharmacy/Zobellia sulfatases]  Writing files metadata to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/export
08 Feb 2025 19:05:40,248 INFO : 
08 Feb 2025 19:05:40,248 INFO : Experiment export completed successfully.
08 Feb 2025 19:05:40,248 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
08 Feb 2025 19:05:40,264 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
08 Feb 2025 19:05:40,264 INFO : 
08 Feb 2025 19:05:40,264 INFO : Importing experiment.
08 Feb 2025 19:05:40,266 DEBUG: [/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases] Importing folder properties from: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/export
08 Feb 2025 19:05:40,266 INFO : Loading folder properties (folder type, settings and active modules)
08 Feb 2025 19:05:40,267 DEBUG: [/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases] Folder type: Targeted MS
08 Feb 2025 19:05:40,267 DEBUG: [/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases] Active modules: Wiki, Search, Announcements, API, Core, Protein, TargetedMS, Experiment, Query, FileContent, PanoramaPublic, Issues, Pipeline
08 Feb 2025 19:05:40,297 INFO : Done importing folder properties (folder type, settings and active modules)
08 Feb 2025 19:05:40,298 INFO : Loading container specific module properties
08 Feb 2025 19:05:40,303 INFO : Done importing container specific module properties
08 Feb 2025 19:05:40,304 INFO : Loading queries
08 Feb 2025 19:05:40,306 INFO : 1 query imported
08 Feb 2025 19:05:40,306 INFO : Done importing queries
08 Feb 2025 19:05:40,307 INFO : Loading etl definitions
08 Feb 2025 19:05:40,307 INFO : Loading wikis
08 Feb 2025 19:05:40,308 INFO : 0 wikis imported
08 Feb 2025 19:05:40,308 INFO : Done importing wikis
08 Feb 2025 19:05:40,309 INFO : Starting Data Class Importer
08 Feb 2025 19:05:40,309 INFO : No types XAR file to process.
08 Feb 2025 19:05:40,309 INFO : Finished Data Class Importer
08 Feb 2025 19:05:40,309 INFO : Starting to copy files to @files
08 Feb 2025 19:05:40,309 INFO : Copied 0 files to @files
08 Feb 2025 19:05:40,310 INFO : Starting to copy files to @assayfiles
08 Feb 2025 19:05:40,310 INFO : Copied 0 files to @assayfiles
08 Feb 2025 19:05:40,310 INFO : Ensuring exp.data rows exist for imported files
08 Feb 2025 19:05:40,359 INFO : Starting Sample Type Importer
08 Feb 2025 19:05:40,360 INFO : No types XAR file to process.
08 Feb 2025 19:05:40,360 INFO : Finished Sample Type Importer
08 Feb 2025 19:05:40,360 INFO : Loading xar
08 Feb 2025 19:05:40,853 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip'
08 Feb 2025 19:05:40,854 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Core'
08 Feb 2025 19:05:40,855 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Output'
08 Feb 2025 19:05:40,855 DEBUG: Protocol import complete
08 Feb 2025 19:05:40,856 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-14565:Carrageenan-sulfatases+from+the+marine+bacterium+Zobellia+galactanivorans+Dsij'
08 Feb 2025 19:05:40,856 DEBUG: Experiment/Run group import complete
08 Feb 2025 19:05:40,869 DEBUG: Protocol action set import complete
08 Feb 2025 19:05:40,875 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip'
08 Feb 2025 19:05:40,879 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14565:2403fcaa-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,881 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14565:2403fc63-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,881 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Core'
08 Feb 2025 19:05:40,883 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Output'
08 Feb 2025 19:05:40,883 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14565:2403fdc0-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,887 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip'
08 Feb 2025 19:05:40,889 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14565:8c10f581-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,892 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14565:8c10f538-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,892 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Core'
08 Feb 2025 19:05:40,893 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Output'
08 Feb 2025 19:05:40,893 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14565:8c10f6c9-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,896 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip'
08 Feb 2025 19:05:40,899 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-14565:8c110623-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,902 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-14565:8c1105dc-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,902 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Core'
08 Feb 2025 19:05:40,903 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-14565:TargetedMS.ImportSkyZip.Output'
08 Feb 2025 19:05:40,903 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-14565:8c110767-c6c3-103d-a2e3-1cc91aa99e00'
08 Feb 2025 19:05:40,910 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247364/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd into the system
08 Feb 2025 19:05:40,910 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247364/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd into the system
08 Feb 2025 19:05:40,910 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247364/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip into the system
08 Feb 2025 19:05:40,911 INFO : Starting import from skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:05:40,913 INFO : Starting to import Skyline document from skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:05:40,914 INFO : Expanding skyline-project_ZgCgsA.skyd
08 Feb 2025 19:05:40,983 INFO : Expanding skyline-project_ZgCgsA.sky.view
08 Feb 2025 19:05:40,984 INFO : Expanding skyline-project_ZgCgsA.sky
08 Feb 2025 19:05:40,985 INFO : Expanding skyline-project_ZgCgsA.skyl
08 Feb 2025 19:05:40,993 INFO : Reading Skyline file, skyline-project_ZgCgsA.sky, to determine if the TransitionChromInfos in the document should be stored...
08 Feb 2025 19:05:40,995 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
08 Feb 2025 19:05:40,996 INFO : 2% Done
08 Feb 2025 19:05:41,202 DEBUG: Starting to load chromatogram headers
08 Feb 2025 19:05:41,204 DEBUG: Done loading chromatogram headers
08 Feb 2025 19:05:41,332 INFO : Inserting pZG231
08 Feb 2025 19:05:41,343 INFO : 8% Done
08 Feb 2025 19:05:41,363 INFO : 13% Done
08 Feb 2025 19:05:41,383 INFO : 19% Done
08 Feb 2025 19:05:41,402 INFO : 24% Done
08 Feb 2025 19:05:41,417 INFO : 26% Done
08 Feb 2025 19:05:41,430 INFO : 31% Done
08 Feb 2025 19:05:41,444 INFO : 35% Done
08 Feb 2025 19:05:41,461 INFO : 42% Done
08 Feb 2025 19:05:41,479 INFO : 48% Done
08 Feb 2025 19:05:41,497 INFO : 54% Done
08 Feb 2025 19:05:41,512 INFO : 57% Done
08 Feb 2025 19:05:41,525 INFO : 63% Done
08 Feb 2025 19:05:41,543 INFO : 67% Done
08 Feb 2025 19:05:41,561 INFO : 73% Done
08 Feb 2025 19:05:41,579 INFO : 78% Done
08 Feb 2025 19:05:41,603 INFO : 86% Done
08 Feb 2025 19:05:41,625 INFO : 92% Done
08 Feb 2025 19:05:41,645 INFO : 98% Done
08 Feb 2025 19:05:41,657 DEBUG: Total peptides inserted: 18
08 Feb 2025 19:05:41,657 INFO : Done parsing Skyline document.
08 Feb 2025 19:05:45,678 INFO : Creating and populating temp tables for Proportion values
08 Feb 2025 19:05:45,683 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Feb 2025 19:05:45,686 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Feb 2025 19:05:45,687 INFO : Cleaning up temp tables
08 Feb 2025 19:05:45,964 INFO : Completed import of Skyline document from skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:05:45,965 INFO : 100% Done
08 Feb 2025 19:05:45,969 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247364/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip into the system
08 Feb 2025 19:05:45,969 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247365/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd into the system
08 Feb 2025 19:05:45,969 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247365/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd into the system
08 Feb 2025 19:05:45,969 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247365/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip into the system
08 Feb 2025 19:05:45,970 INFO : Starting import from skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:05:45,971 INFO : Starting to import Skyline document from skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:05:45,971 INFO : Expanding skyline-project_ZgCgsB1.skyd
08 Feb 2025 19:05:46,079 INFO : Expanding skyline-project_ZgCgsB1.sky.view
08 Feb 2025 19:05:46,080 INFO : Expanding skyline-project_ZgCgsB1.sky
08 Feb 2025 19:05:46,083 INFO : Expanding skyline-project_ZgCgsB1.skyl
08 Feb 2025 19:05:46,096 INFO : Reading Skyline file, skyline-project_ZgCgsB1.sky, to determine if the TransitionChromInfos in the document should be stored...
08 Feb 2025 19:05:46,099 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
08 Feb 2025 19:05:46,101 INFO : 2% Done
08 Feb 2025 19:05:46,457 DEBUG: Starting to load chromatogram headers
08 Feb 2025 19:05:46,459 DEBUG: Done loading chromatogram headers
08 Feb 2025 19:05:46,559 INFO : Inserting pZG_34
08 Feb 2025 19:05:46,568 INFO : 4% Done
08 Feb 2025 19:05:46,590 INFO : 7% Done
08 Feb 2025 19:05:46,613 INFO : 10% Done
08 Feb 2025 19:05:46,642 INFO : 13% Done
08 Feb 2025 19:05:46,670 INFO : 15% Done
08 Feb 2025 19:05:46,691 INFO : 18% Done
08 Feb 2025 19:05:46,709 INFO : 21% Done
08 Feb 2025 19:05:46,723 INFO : 22% Done
08 Feb 2025 19:05:46,731 INFO : 23% Done
08 Feb 2025 19:05:46,744 INFO : 26% Done
08 Feb 2025 19:05:46,764 INFO : 27% Done
08 Feb 2025 19:05:46,772 INFO : 28% Done
08 Feb 2025 19:05:46,791 INFO : 31% Done
08 Feb 2025 19:05:46,814 INFO : 34% Done
08 Feb 2025 19:05:46,836 INFO : 37% Done
08 Feb 2025 19:05:46,858 INFO : 39% Done
08 Feb 2025 19:05:46,877 INFO : 41% Done
08 Feb 2025 19:05:46,892 INFO : 43% Done
08 Feb 2025 19:05:46,913 INFO : 46% Done
08 Feb 2025 19:05:46,939 INFO : 48% Done
08 Feb 2025 19:05:46,969 INFO : 51% Done
08 Feb 2025 19:05:46,999 INFO : 54% Done
08 Feb 2025 19:05:47,024 INFO : 56% Done
08 Feb 2025 19:05:47,047 INFO : 59% Done
08 Feb 2025 19:05:47,078 INFO : 63% Done
08 Feb 2025 19:05:47,103 INFO : 65% Done
08 Feb 2025 19:05:47,123 INFO : 67% Done
08 Feb 2025 19:05:47,150 INFO : 70% Done
08 Feb 2025 19:05:47,173 INFO : 72% Done
08 Feb 2025 19:05:47,193 INFO : 74% Done
08 Feb 2025 19:05:47,219 INFO : 78% Done
08 Feb 2025 19:05:47,241 INFO : 79% Done
08 Feb 2025 19:05:47,257 INFO : 82% Done
08 Feb 2025 19:05:47,281 INFO : 85% Done
08 Feb 2025 19:05:47,302 INFO : 87% Done
08 Feb 2025 19:05:47,314 INFO : 89% Done
08 Feb 2025 19:05:47,327 INFO : 90% Done
08 Feb 2025 19:05:47,341 INFO : 92% Done
08 Feb 2025 19:05:47,356 INFO : 94% Done
08 Feb 2025 19:05:47,373 INFO : 96% Done
08 Feb 2025 19:05:47,388 INFO : 98% Done
08 Feb 2025 19:05:47,403 DEBUG: Total peptides inserted: 42
08 Feb 2025 19:05:47,403 INFO : Done parsing Skyline document.
08 Feb 2025 19:06:02,906 INFO : Creating and populating temp tables for Proportion values
08 Feb 2025 19:06:02,912 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Feb 2025 19:06:02,922 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Feb 2025 19:06:02,926 INFO : Cleaning up temp tables
08 Feb 2025 19:06:03,165 INFO : Completed import of Skyline document from skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:06:03,167 INFO : 100% Done
08 Feb 2025 19:06:03,170 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247365/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip into the system
08 Feb 2025 19:06:03,170 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247366/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd into the system
08 Feb 2025 19:06:03,170 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247366/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd into the system
08 Feb 2025 19:06:03,170 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247366/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip into the system
08 Feb 2025 19:06:03,171 INFO : Starting import from skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:03,172 INFO : Starting to import Skyline document from skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:03,173 INFO : Expanding skyline-project_ZgCgsC.skyd
08 Feb 2025 19:06:03,288 INFO : Expanding skyline-project_ZgCgsC.sky.view
08 Feb 2025 19:06:03,288 INFO : Expanding skyline-project_ZgCgsC.sky
08 Feb 2025 19:06:03,291 INFO : Expanding skyline-project_ZgCgsC.skyl
08 Feb 2025 19:06:03,307 INFO : Reading Skyline file, skyline-project_ZgCgsC.sky, to determine if the TransitionChromInfos in the document should be stored...
08 Feb 2025 19:06:03,310 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
08 Feb 2025 19:06:03,313 INFO : 2% Done
08 Feb 2025 19:06:03,662 DEBUG: Starting to load chromatogram headers
08 Feb 2025 19:06:03,664 DEBUG: Done loading chromatogram headers
08 Feb 2025 19:06:03,767 INFO : Inserting pZG35
08 Feb 2025 19:06:03,775 INFO : 3% Done
08 Feb 2025 19:06:03,793 INFO : 6% Done
08 Feb 2025 19:06:03,812 INFO : 8% Done
08 Feb 2025 19:06:03,831 INFO : 10% Done
08 Feb 2025 19:06:03,848 INFO : 12% Done
08 Feb 2025 19:06:03,863 INFO : 13% Done
08 Feb 2025 19:06:03,882 INFO : 17% Done
08 Feb 2025 19:06:03,906 INFO : 18% Done
08 Feb 2025 19:06:03,924 INFO : 20% Done
08 Feb 2025 19:06:03,948 INFO : 24% Done
08 Feb 2025 19:06:03,983 INFO : 28% Done
08 Feb 2025 19:06:04,018 INFO : 30% Done
08 Feb 2025 19:06:04,043 INFO : 33% Done
08 Feb 2025 19:06:04,082 INFO : 38% Done
08 Feb 2025 19:06:04,136 INFO : 43% Done
08 Feb 2025 19:06:04,177 INFO : 45% Done
08 Feb 2025 19:06:04,195 INFO : 47% Done
08 Feb 2025 19:06:04,212 INFO : 49% Done
08 Feb 2025 19:06:04,234 INFO : 53% Done
08 Feb 2025 19:06:04,259 INFO : 54% Done
08 Feb 2025 19:06:04,280 INFO : 58% Done
08 Feb 2025 19:06:04,308 INFO : 62% Done
08 Feb 2025 19:06:04,336 INFO : 65% Done
08 Feb 2025 19:06:04,356 INFO : 67% Done
08 Feb 2025 19:06:04,381 INFO : 72% Done
08 Feb 2025 19:06:04,408 INFO : 73% Done
08 Feb 2025 19:06:04,428 INFO : 76% Done
08 Feb 2025 19:06:04,457 INFO : 80% Done
08 Feb 2025 19:06:04,493 INFO : 84% Done
08 Feb 2025 19:06:04,526 INFO : 87% Done
08 Feb 2025 19:06:04,549 INFO : 88% Done
08 Feb 2025 19:06:04,563 INFO : 89% Done
08 Feb 2025 19:06:04,581 INFO : 93% Done
08 Feb 2025 19:06:04,606 INFO : 95% Done
08 Feb 2025 19:06:04,620 INFO : 96% Done
08 Feb 2025 19:06:04,633 INFO : 98% Done
08 Feb 2025 19:06:04,643 DEBUG: Total peptides inserted: 36
08 Feb 2025 19:06:04,643 INFO : Done parsing Skyline document.
08 Feb 2025 19:06:31,407 INFO : Creating and populating temp tables for Proportion values
08 Feb 2025 19:06:31,412 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Feb 2025 19:06:31,425 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Feb 2025 19:06:31,428 INFO : Cleaning up temp tables
08 Feb 2025 19:06:31,657 INFO : Completed import of Skyline document from skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:31,659 INFO : 100% Done
08 Feb 2025 19:06:31,661 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/U%20Greifswald%20Institute%20of%20Pharmacy%20-%20Zobellia%20sulfatases/@files/export/xar/experiments_and_runs.xar.exploded/Run247366/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip into the system
08 Feb 2025 19:06:32,365 INFO : Done importing xar
08 Feb 2025 19:06:32,367 INFO : Loading pages and webpart properties
08 Feb 2025 19:06:32,411 INFO : Done importing 3 page(s) with 5 webpart(s)
08 Feb 2025 19:06:32,411 INFO : Loading File Browser config
08 Feb 2025 19:06:32,411 INFO : Done importing File Browser config
08 Feb 2025 19:06:32,412 INFO : Starting Sample Status Data import
08 Feb 2025 19:06:32,412 INFO : No sample types XAR file to process.
08 Feb 2025 19:06:32,412 INFO : Finished importing Sample Status Data
08 Feb 2025 19:06:32,415 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
08 Feb 2025 19:06:32,417 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
08 Feb 2025 19:06:32,418 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
08 Feb 2025 19:06:32,418 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
08 Feb 2025 19:06:32,418 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
08 Feb 2025 19:06:32,418 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
08 Feb 2025 19:06:32,420 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
08 Feb 2025 19:06:32,427 INFO : Moving files to folder /Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases and creating symlinks
08 Feb 2025 19:06:32,428 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:06:32,429 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:06:32,430 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles
08 Feb 2025 19:06:32,431 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1b.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1b.raw
08 Feb 2025 19:06:32,432 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1b.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1b.raw
08 Feb 2025 19:06:32,433 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7a.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7a.raw
08 Feb 2025 19:06:32,434 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7a.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7a.raw
08 Feb 2025 19:06:32,435 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6c.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6c.raw
08 Feb 2025 19:06:32,436 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6c.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6c.raw
08 Feb 2025 19:06:32,437 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6b.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6b.raw
08 Feb 2025 19:06:32,438 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6b.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6b.raw
08 Feb 2025 19:06:32,439 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1a.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1a.raw
08 Feb 2025 19:06:32,439 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1a.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3145_PRM_1a.raw
08 Feb 2025 19:06:32,441 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7b.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7b.raw
08 Feb 2025 19:06:32,442 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7b.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7b.raw
08 Feb 2025 19:06:32,443 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7c.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7c.raw
08 Feb 2025 19:06:32,443 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7c.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3151_PRM_7c.raw
08 Feb 2025 19:06:32,444 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6a.raw to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6a.raw
08 Feb 2025 19:06:32,445 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6a.raw targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/RawFiles/240117_QE1_PM1_SK_MZ_ZG3146_PRM_6a.raw
08 Feb 2025 19:06:32,446 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18
08 Feb 2025 19:06:32,447 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyl to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyl
08 Feb 2025 19:06:32,447 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyl targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyl
08 Feb 2025 19:06:32,448 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky
08 Feb 2025 19:06:32,449 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky
08 Feb 2025 19:06:32,450 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd
08 Feb 2025 19:06:32,451 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd
08 Feb 2025 19:06:32,452 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky.view to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky.view
08 Feb 2025 19:06:32,453 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky.view targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.sky.view
08 Feb 2025 19:06:32,454 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:06:32,455 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:06:32,455 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55
08 Feb 2025 19:06:32,456 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky.view to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky.view
08 Feb 2025 19:06:32,457 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky.view targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky.view
08 Feb 2025 19:06:32,458 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky
08 Feb 2025 19:06:32,459 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.sky
08 Feb 2025 19:06:32,460 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd
08 Feb 2025 19:06:32,461 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd
08 Feb 2025 19:06:32,462 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyl to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyl
08 Feb 2025 19:06:32,462 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyl targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyl
08 Feb 2025 19:06:32,463 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12
08 Feb 2025 19:06:32,464 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky
08 Feb 2025 19:06:32,465 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky
08 Feb 2025 19:06:32,466 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyl to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyl
08 Feb 2025 19:06:32,467 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyl targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyl
08 Feb 2025 19:06:32,468 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd
08 Feb 2025 19:06:32,468 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd
08 Feb 2025 19:06:32,469 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky.view to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky.view
08 Feb 2025 19:06:32,470 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky.view targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.sky.view
08 Feb 2025 19:06:32,471 DEBUG: Moved file /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip to /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:32,472 DEBUG: Created symlink /data/labkey/files/U Greifswald - Institute of Pharmacy/Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip targeting /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:32,472 INFO : Aligning data files urls in folder: /Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases
08 Feb 2025 19:06:32,474 DEBUG: Setting filePathRoot on copied run: skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files
08 Feb 2025 19:06:32,476 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsA.skyd to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18/skyline-project_ZgCgsA.skyd
08 Feb 2025 19:06:32,477 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsA_2025-02-06_15-18-18.sky.zip
08 Feb 2025 19:06:32,478 DEBUG: Setting filePathRoot on copied run: skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files
08 Feb 2025 19:06:32,480 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55.sky.zip
08 Feb 2025 19:06:32,481 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsB1.skyd to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsB1_2025-02-06_15-21-55/skyline-project_ZgCgsB1.skyd
08 Feb 2025 19:06:32,481 DEBUG: Setting filePathRoot on copied run: skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files
08 Feb 2025 19:06:32,483 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsC.skyd to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12/skyline-project_ZgCgsC.skyd
08 Feb 2025 19:06:32,483 DEBUG: Setting dataFileUri on copied data: skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip to: /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/skyline-project_ZgCgsC_2025-02-06_15-24-12.sky.zip
08 Feb 2025 19:06:32,484 INFO : Importing files metadata.
08 Feb 2025 19:06:32,484 DEBUG: [/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases]  Reading files metadata from /data/labkey/files/Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases/@files/export
08 Feb 2025 19:06:32,484 INFO : 
08 Feb 2025 19:06:32,484 INFO : Experiment import completed successfully.
08 Feb 2025 19:06:32,484 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
08 Feb 2025 19:06:32,500 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
08 Feb 2025 19:06:32,500 INFO : 
08 Feb 2025 19:06:32,500 INFO : Checking for library folders.
08 Feb 2025 19:06:32,501 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
08 Feb 2025 19:06:32,513 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
08 Feb 2025 19:06:32,513 INFO : 
08 Feb 2025 19:06:32,513 INFO : Finishing up experiment copy.
08 Feb 2025 19:06:32,514 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2025/U Greifswald Institute of Pharmacy - Zobellia sulfatases
08 Feb 2025 19:06:32,514 INFO : Setting version on new experiment to 1
08 Feb 2025 19:06:32,516 INFO : Updating permanent link to point to the new copy of the data.
08 Feb 2025 19:06:32,531 INFO : Removing copy permissions given to Panorama Public
08 Feb 2025 19:06:32,533 INFO : Adding read permissions to all users that are folder admins in the source folder.
08 Feb 2025 19:06:32,533 INFO : Assigning ReaderRole to marie-katherin.zuehlke@uni-greifswald.de
08 Feb 2025 19:06:32,533 INFO : Assigning PanoramaPublicSubmitterRole to marie-katherin.zuehlke@uni-greifswald.de
08 Feb 2025 19:06:32,538 INFO : Adding user marie-katherin.zuehlke@uni-greifswald.de to group Panorama Public Submitters
08 Feb 2025 19:06:32,540 INFO : Updating the 'Raw Data' tab configuration
08 Feb 2025 19:06:32,541 INFO : Creating a reviewer account.
08 Feb 2025 19:06:32,582 INFO : Created reviewer with email: panorama+reviewer326@proteinms.net
08 Feb 2025 19:06:32,582 INFO : Generating password.
08 Feb 2025 19:06:32,718 INFO : Set reviewer password successfully.
08 Feb 2025 19:06:32,723 INFO : Adding user panorama+reviewer326@proteinms.net to group Reviewers
08 Feb 2025 19:06:32,724 INFO : Hiding the Data Pipeline tab.
08 Feb 2025 19:06:32,727 INFO : Updating Submission. Setting copiedExperimentId to 2010
08 Feb 2025 19:06:34,023 INFO : Assigning a ProteomeXchange ID.
08 Feb 2025 19:06:34,442 INFO : Assigned ProteomeXchange ID: PXD060597
08 Feb 2025 19:06:34,442 INFO : Assigning a DOI.
08 Feb 2025 19:06:35,158 INFO : Assigned DOI: 10.6069/jp2n-x328
08 Feb 2025 19:06:35,234 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'