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Validating data for experiment Id: 2105, validation Id: 1676

MacCoss - Casanovo 5.0

Job Status

Created: 2025-07-23 10:38:08
Modified: 2025-07-23 10:38:08
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 2105, validation Id: 1676
File Path: /data/labkey/files/Panorama Public/2025/MacCoss - Casanovo 5.0/@files/Experiment_Validation_2196_2025-07-23_10-38-07.log
Files: Experiment_Validation_2196_2025-07-23_10-38-07.log
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Log File


23 Jul 2025 10:38:08,492 INFO : Validating data for a ProteomeXchange submission.
23 Jul 2025 10:38:08,493 INFO : =======================================
23 Jul 2025 10:38:08,527 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
23 Jul 2025 10:38:08,528 INFO : Validating data for experiment Id: 2105, validation Id: 1676
23 Jul 2025 10:38:08,536 INFO : Validating data for 3 Skyline documents in 1 folders
23 Jul 2025 10:38:08,537 INFO : Sample file validation for Skyline document: yeast_2025-07-21_15-12-08.sky.zip
23 Jul 2025 10:38:08,537 INFO :   Found all sample files.
23 Jul 2025 10:38:08,538 INFO : Sample file validation for Skyline document: mouse_2025-07-21_15-13-32.sky.zip
23 Jul 2025 10:38:08,538 INFO :   Found all sample files.
23 Jul 2025 10:38:08,539 INFO : Sample file validation for Skyline document: hela_2025-07-21_15-14-01.sky.zip
23 Jul 2025 10:38:08,539 INFO :   Found all sample files.
23 Jul 2025 10:38:08,581 INFO : Modifications validation:
23 Jul 2025 10:38:08,581 INFO : VALID MODIFICATIONS:
23 Jul 2025 10:38:08,581 INFO : 11502: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
23 Jul 2025 10:38:08,581 INFO :     yeast_2025-07-21_15-12-08.sky.zip
23 Jul 2025 10:38:08,582 INFO :     mouse_2025-07-21_15-13-32.sky.zip
23 Jul 2025 10:38:08,582 INFO :     hela_2025-07-21_15-14-01.sky.zip
23 Jul 2025 10:38:08,582 INFO : INVALID MODIFICATIONS (No Unimod ID):
23 Jul 2025 10:38:08,583 INFO : Validating spectral library: hela_casanovo.blib
23 Jul 2025 10:38:08,593 INFO : 'hela_casanovo' (hela_casanovo.blib) library in 1 Skyline documents was built with 1 raw files; 1 peptide Id files. Status: Missing spectrum and peptide Id  files.
23 Jul 2025 10:38:08,593 INFO :   MISSING FILES:
23 Jul 2025 10:38:08,593 INFO :     Spectrum File: 1.ms2
23 Jul 2025 10:38:08,593 INFO :     Peptide Id File: export.ssl
23 Jul 2025 10:38:08,593 INFO : Validating spectral library: yeast_casanovo.blib
23 Jul 2025 10:38:08,628 INFO : 'yeast_casanovo' (yeast_casanovo.blib) library in 1 Skyline documents was built with 1 raw files; 1 peptide Id files. Status: Missing spectrum and peptide Id  files.
23 Jul 2025 10:38:08,628 INFO :   MISSING FILES:
23 Jul 2025 10:38:08,628 INFO :     Spectrum File: 1.ms2
23 Jul 2025 10:38:08,628 INFO :     Peptide Id File: export.ssl
23 Jul 2025 10:38:08,629 INFO : Validating spectral library: mouse_casanovo.blib
23 Jul 2025 10:38:08,633 INFO : 'mouse_casanovo' (mouse_casanovo.blib) library in 1 Skyline documents was built with 1 raw files; 1 peptide Id files. Status: Missing spectrum and peptide Id  files.
23 Jul 2025 10:38:08,633 INFO :   MISSING FILES:
23 Jul 2025 10:38:08,633 INFO :     Spectrum File: 1.ms2
23 Jul 2025 10:38:08,633 INFO :     Peptide Id File: export.ssl
23 Jul 2025 10:38:08,633 INFO : Spectral library validation complete.
23 Jul 2025 10:38:08,633 INFO : Data validation is complete. Status is Complete
23 Jul 2025 10:38:08,633 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'