14 Jul 2025 10:02:29,403 INFO : Copying experiment "Reverse response curves of 105 target peptide in saliva sample" from folder /Chang Gung University - HsiaoYC Lab/DSS project to /Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project
14 Jul 2025 10:02:29,403 INFO : =======================================
14 Jul 2025 10:02:29,415 DEBUG: Resetting Job ID: e75cd03f-4301-103e-a466-1cc91aa91d00
14 Jul 2025 10:02:29,433 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
14 Jul 2025 10:02:29,433 INFO : 
14 Jul 2025 10:02:29,433 INFO : Exporting experiment.
14 Jul 2025 10:02:31,876 INFO : Exporting files metadata.
14 Jul 2025 10:02:31,876 DEBUG: [/Chang Gung University - HsiaoYC Lab/DSS project]  Writing files metadata to /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/export
14 Jul 2025 10:02:31,877 INFO : 
14 Jul 2025 10:02:31,877 INFO : Experiment export completed successfully.
14 Jul 2025 10:02:31,877 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
14 Jul 2025 10:02:31,893 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
14 Jul 2025 10:02:31,893 INFO : 
14 Jul 2025 10:02:31,893 INFO : Importing experiment.
14 Jul 2025 10:02:31,894 DEBUG: [/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project] Importing folder properties from: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/export
14 Jul 2025 10:02:31,895 INFO : Loading folder properties (folder type, settings and active modules)
14 Jul 2025 10:02:31,895 DEBUG: [/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project] Folder type: Targeted MS
14 Jul 2025 10:02:31,895 DEBUG: [/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project] Active modules: Experiment, API, Issues, Search, Query, Wiki, TargetedMS, Core, Announcements, PanoramaPublic, Pipeline, Protein, FileContent
14 Jul 2025 10:02:31,931 INFO : Done importing folder properties (folder type, settings and active modules)
14 Jul 2025 10:02:31,932 INFO : Loading container specific module properties
14 Jul 2025 10:02:31,939 INFO : Done importing container specific module properties
14 Jul 2025 10:02:31,940 INFO : Loading queries
14 Jul 2025 10:02:31,942 INFO : 1 query imported
14 Jul 2025 10:02:31,942 INFO : Done importing queries
14 Jul 2025 10:02:31,943 INFO : Loading etl definitions
14 Jul 2025 10:02:31,944 INFO : Loading wikis
14 Jul 2025 10:02:31,945 INFO : 0 wikis imported
14 Jul 2025 10:02:31,945 INFO : Done importing wikis
14 Jul 2025 10:02:31,946 INFO : Starting Data Class Importer
14 Jul 2025 10:02:31,946 INFO : No types XAR file to process.
14 Jul 2025 10:02:31,946 INFO : Finished Data Class Importer
14 Jul 2025 10:02:31,946 INFO : Starting to copy files to @files
14 Jul 2025 10:02:31,946 INFO : Copied 0 files to @files
14 Jul 2025 10:02:31,947 INFO : Starting to copy files to @assayfiles
14 Jul 2025 10:02:31,947 INFO : Copied 0 files to @assayfiles
14 Jul 2025 10:02:31,947 INFO : Ensuring exp.data rows exist for imported files
14 Jul 2025 10:02:32,009 INFO : Starting Sample Type Importer
14 Jul 2025 10:02:32,009 INFO : No types XAR file to process.
14 Jul 2025 10:02:32,009 INFO : Finished Sample Type Importer
14 Jul 2025 10:02:32,010 INFO : Loading xar
14 Jul 2025 10:02:32,405 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip'
14 Jul 2025 10:02:32,406 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip.Core'
14 Jul 2025 10:02:32,407 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip.Output'
14 Jul 2025 10:02:32,407 DEBUG: Protocol import complete
14 Jul 2025 10:02:32,408 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-15303:Reverse+response+curves+of+105+target+peptide+in+saliva+sample'
14 Jul 2025 10:02:32,408 DEBUG: Experiment/Run group import complete
14 Jul 2025 10:02:32,414 DEBUG: Protocol action set import complete
14 Jul 2025 10:02:32,419 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip'
14 Jul 2025 10:02:32,423 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-15303:bf6a82d4-3fe3-103e-a466-1cc91aa91d00'
14 Jul 2025 10:02:32,426 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-15303:bf6a8283-3fe3-103e-a466-1cc91aa91d00'
14 Jul 2025 10:02:32,426 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip.Core'
14 Jul 2025 10:02:32,428 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-15303:TargetedMS.ImportSkyZip.Output'
14 Jul 2025 10:02:32,428 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-15303:bf6a885a-3fe3-103e-a466-1cc91aa91d00'
14 Jul 2025 10:02:32,432 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/Chang%20Gung%20University%20HsiaoYC%20Lab%20-%20DSS%20project/@files/export/xar/experiments_and_runs.xar.exploded/Run274116/DSS%20Response%20curve_105plex_5repeats_2025-07-11_01-47-02/DSS%20Response%20curve_105plex_5repeats.skyd into the system
14 Jul 2025 10:02:32,432 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/Chang%20Gung%20University%20HsiaoYC%20Lab%20-%20DSS%20project/@files/export/xar/experiments_and_runs.xar.exploded/Run274116/DSS%20Response%20curve_105plex_5repeats_2025-07-11_01-47-02/DSS%20Response%20curve_105plex_5repeats.skyd into the system
14 Jul 2025 10:02:32,432 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2025/Chang%20Gung%20University%20HsiaoYC%20Lab%20-%20DSS%20project/@files/export/xar/experiments_and_runs.xar.exploded/Run274116/DSS%20Response%20curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip into the system
14 Jul 2025 10:02:32,432 INFO : Starting import from DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:32,434 INFO : Starting to import Skyline document from DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:32,435 INFO : Expanding DSS Response curve_105plex_5repeats.skyd
14 Jul 2025 10:02:32,659 INFO : Expanding DSS Response curve_105plex_5repeats.sky.view
14 Jul 2025 10:02:32,659 INFO : Expanding DSS Response curve_105plex_5repeats.sky
14 Jul 2025 10:02:32,706 INFO : Reading Skyline file, DSS Response curve_105plex_5repeats.sky, to determine if the TransitionChromInfos in the document should be stored...
14 Jul 2025 10:02:32,763 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
14 Jul 2025 10:02:32,764 WARN : The version of this Skyline document is 25.1. This is newer than the highest supported version 23.1
14 Jul 2025 10:02:32,765 INFO : Copying SKYD to temp directory for import purposes
14 Jul 2025 10:02:32,835 INFO : Copying complete
14 Jul 2025 10:02:32,836 DEBUG: Starting to load chromatogram headers
14 Jul 2025 10:02:32,848 DEBUG: Done loading chromatogram headers
14 Jul 2025 10:02:33,087 INFO : Inserting sp|P10145|IL8_HUMAN
14 Jul 2025 10:02:33,093 INFO : 1% Done
14 Jul 2025 10:02:33,169 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,169 INFO : Inserting sp|Q16658|FSCN1_HUMAN
14 Jul 2025 10:02:33,175 INFO : 2% Done
14 Jul 2025 10:02:33,245 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,245 INFO : Inserting sp|P17936|IBP3_HUMAN
14 Jul 2025 10:02:33,253 INFO : 3% Done
14 Jul 2025 10:02:33,323 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,323 INFO : Inserting sp|P61769|B2MG_HUMAN
14 Jul 2025 10:02:33,331 INFO : 5% Done
14 Jul 2025 10:02:33,434 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,434 INFO : Inserting sp|P02652|APOA2_HUMAN
14 Jul 2025 10:02:33,441 INFO : 6% Done
14 Jul 2025 10:02:33,511 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,511 INFO : Inserting sp|P02647|APOA1_HUMAN
14 Jul 2025 10:02:33,519 INFO : 7% Done
14 Jul 2025 10:02:33,618 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,618 INFO : Inserting sp|P02749|APOH_HUMAN
14 Jul 2025 10:02:33,626 INFO : 8% Done
14 Jul 2025 10:02:33,696 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,696 INFO : Inserting sp|Q10589|BST2_HUMAN
14 Jul 2025 10:02:33,704 INFO : 9% Done
14 Jul 2025 10:02:33,771 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,771 INFO : Inserting sp|P14780|MMP9_HUMAN
14 Jul 2025 10:02:33,777 INFO : 10% Done
14 Jul 2025 10:02:33,843 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,843 INFO : Inserting sp|P08697|A2AP_HUMAN
14 Jul 2025 10:02:33,848 INFO : 11% Done
14 Jul 2025 10:02:33,914 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:33,914 INFO : Inserting sp|P02765|FETUA_HUMAN
14 Jul 2025 10:02:33,921 INFO : 12% Done
14 Jul 2025 10:02:34,018 INFO : 13% Done
14 Jul 2025 10:02:34,085 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:34,085 INFO : Inserting sp|P04179|SODM_HUMAN
14 Jul 2025 10:02:34,090 INFO : 14% Done
14 Jul 2025 10:02:34,158 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,158 INFO : Inserting sp|Q01581|HMCS1_HUMAN
14 Jul 2025 10:02:34,163 INFO : 15% Done
14 Jul 2025 10:02:34,232 INFO : 16% Done
14 Jul 2025 10:02:34,298 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:34,298 INFO : Inserting sp|P42224|STAT1_HUMAN
14 Jul 2025 10:02:34,303 INFO : 17% Done
14 Jul 2025 10:02:34,373 INFO : 18% Done
14 Jul 2025 10:02:34,439 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:34,439 INFO : Inserting sp|P05787|K2C8_HUMAN
14 Jul 2025 10:02:34,444 INFO : 19% Done
14 Jul 2025 10:02:34,511 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,511 INFO : Inserting sp|Q15848|ADIPO_HUMAN
14 Jul 2025 10:02:34,581 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,581 INFO : Inserting sp|P35542|SAA4_HUMAN
14 Jul 2025 10:02:34,586 INFO : 20% Done
14 Jul 2025 10:02:34,654 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,654 INFO : Inserting sp|P02675|FIBB_HUMAN
14 Jul 2025 10:02:34,659 INFO : 21% Done
14 Jul 2025 10:02:34,725 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,725 INFO : Inserting sp|P17900|SAP3_HUMAN
14 Jul 2025 10:02:34,730 INFO : 22% Done
14 Jul 2025 10:02:34,796 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,796 INFO : Inserting sp|P06727|APOA4_HUMAN
14 Jul 2025 10:02:34,802 INFO : 23% Done
14 Jul 2025 10:02:34,868 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:34,868 INFO : Inserting sp|P02671|FIBA_HUMAN
14 Jul 2025 10:02:34,873 INFO : 24% Done
14 Jul 2025 10:02:34,943 INFO : 25% Done
14 Jul 2025 10:02:35,009 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:35,009 INFO : Inserting sp|P06396|GELS_HUMAN
14 Jul 2025 10:02:35,080 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,080 INFO : Inserting sp|P05090|APOD_HUMAN
14 Jul 2025 10:02:35,085 INFO : 26% Done
14 Jul 2025 10:02:35,151 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,151 INFO : Inserting sp|P06702|S10A9_HUMAN
14 Jul 2025 10:02:35,156 INFO : 27% Done
14 Jul 2025 10:02:35,223 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,223 INFO : Inserting sp|P00450|CERU_HUMAN
14 Jul 2025 10:02:35,228 INFO : 28% Done
14 Jul 2025 10:02:35,294 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,294 INFO : Inserting sp|P19827|ITIH1_HUMAN
14 Jul 2025 10:02:35,300 INFO : 29% Done
14 Jul 2025 10:02:35,366 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,366 INFO : Inserting sp|P01024|CO3_HUMAN
14 Jul 2025 10:02:35,372 INFO : 30% Done
14 Jul 2025 10:02:35,437 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,438 INFO : Inserting sp|P05161|UCRP_HUMAN
14 Jul 2025 10:02:35,443 INFO : 31% Done
14 Jul 2025 10:02:35,508 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,508 INFO : Inserting sp|P02654|APOC1_HUMAN
14 Jul 2025 10:02:35,512 INFO : 32% Done
14 Jul 2025 10:02:35,579 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,579 INFO : Inserting sp|P35080|PROF2_HUMAN
14 Jul 2025 10:02:35,649 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,649 INFO : Inserting sp|O14791|APOL1_HUMAN
14 Jul 2025 10:02:35,656 INFO : 34% Done
14 Jul 2025 10:02:35,748 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,748 INFO : Inserting sp|P02741|CRP_HUMAN
14 Jul 2025 10:02:35,754 INFO : 35% Done
14 Jul 2025 10:02:35,820 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,820 INFO : Inserting sp|P05546|HEP2_HUMAN
14 Jul 2025 10:02:35,825 INFO : 36% Done
14 Jul 2025 10:02:35,891 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,891 INFO : Inserting sp|P24821|TENA_HUMAN
14 Jul 2025 10:02:35,897 INFO : 37% Done
14 Jul 2025 10:02:35,963 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:35,963 INFO : Inserting sp|P08603|CFAH_HUMAN
14 Jul 2025 10:02:35,968 INFO : 38% Done
14 Jul 2025 10:02:36,069 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,069 INFO : Inserting sp|P14151|LYAM1_HUMAN
14 Jul 2025 10:02:36,154 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,156 INFO : 39% Done
14 Jul 2025 10:02:36,156 INFO : Inserting sp|P21333|FLNA_HUMAN
14 Jul 2025 10:02:36,227 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,227 INFO : Inserting sp|P05783|K1C18_HUMAN
14 Jul 2025 10:02:36,233 INFO : 40% Done
14 Jul 2025 10:02:36,299 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,299 INFO : Inserting sp|Q13753|LAMC2_HUMAN
14 Jul 2025 10:02:36,305 INFO : 41% Done
14 Jul 2025 10:02:36,370 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,370 INFO : Inserting sp|P31946|1433B_HUMAN
14 Jul 2025 10:02:36,376 INFO : 42% Done
14 Jul 2025 10:02:36,442 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,442 INFO : Inserting sp|P02748|CO9_HUMAN
14 Jul 2025 10:02:36,447 INFO : 43% Done
14 Jul 2025 10:02:36,515 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,515 INFO : Inserting sp|P00738|HPT_HUMAN
14 Jul 2025 10:02:36,520 INFO : 44% Done
14 Jul 2025 10:02:36,586 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,587 INFO : Inserting sp|P32119|PRDX2_HUMAN
14 Jul 2025 10:02:36,592 INFO : 45% Done
14 Jul 2025 10:02:36,657 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,657 INFO : Inserting sp|Q9UBG3|CRNN_HUMAN
14 Jul 2025 10:02:36,663 INFO : 46% Done
14 Jul 2025 10:02:36,729 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,729 INFO : Inserting sp|P07355|ANXA2_HUMAN
14 Jul 2025 10:02:36,734 INFO : 47% Done
14 Jul 2025 10:02:36,801 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:36,801 INFO : Inserting sp|P02751|FINC_HUMAN
14 Jul 2025 10:02:36,806 INFO : 48% Done
14 Jul 2025 10:02:36,875 INFO : 49% Done
14 Jul 2025 10:02:36,942 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:36,942 INFO : Inserting sp|P10909|CLUS_HUMAN
14 Jul 2025 10:02:36,947 INFO : 50% Done
14 Jul 2025 10:02:37,016 INFO : 51% Done
14 Jul 2025 10:02:37,081 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:37,081 INFO : Inserting sp|P05155|IC1_HUMAN
14 Jul 2025 10:02:37,087 INFO : 52% Done
14 Jul 2025 10:02:37,154 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,154 INFO : Inserting sp|P09486|SPRC_HUMAN
14 Jul 2025 10:02:37,227 INFO : 53% Done
14 Jul 2025 10:02:37,293 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:37,293 INFO : Inserting sp|P19971|TYPH_HUMAN
14 Jul 2025 10:02:37,299 INFO : 54% Done
14 Jul 2025 10:02:37,366 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,366 INFO : Inserting sp|P00747|PLMN_HUMAN
14 Jul 2025 10:02:37,371 INFO : 55% Done
14 Jul 2025 10:02:37,436 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,436 INFO : Inserting sp|P80188|NGAL_HUMAN
14 Jul 2025 10:02:37,442 INFO : 56% Done
14 Jul 2025 10:02:37,508 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,508 INFO : Inserting sp|P01008|ANT3_HUMAN
14 Jul 2025 10:02:37,513 INFO : 57% Done
14 Jul 2025 10:02:37,580 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,580 INFO : Inserting sp|P29034|S10A2_HUMAN
14 Jul 2025 10:02:37,585 INFO : 58% Done
14 Jul 2025 10:02:37,651 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,652 INFO : Inserting sp|P00751|CFAB_HUMAN
14 Jul 2025 10:02:37,657 INFO : 59% Done
14 Jul 2025 10:02:37,723 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,723 INFO : Inserting sp|P00748|FA12_HUMAN
14 Jul 2025 10:02:37,729 INFO : 60% Done
14 Jul 2025 10:02:37,795 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,795 INFO : Inserting sp|P02763|A1AG1_HUMAN
14 Jul 2025 10:02:37,800 INFO : 61% Done
14 Jul 2025 10:02:37,866 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,866 INFO : Inserting sp|P00918|CAH2_HUMAN
14 Jul 2025 10:02:37,871 INFO : 62% Done
14 Jul 2025 10:02:37,937 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:37,937 INFO : Inserting sp|P02774|VTDB_HUMAN
14 Jul 2025 10:02:37,942 INFO : 63% Done
14 Jul 2025 10:02:38,008 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,008 INFO : Inserting sp|P05109|S10A8_HUMAN
14 Jul 2025 10:02:38,013 INFO : 64% Done
14 Jul 2025 10:02:38,083 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,083 INFO : Inserting sp|P00734|THRB_HUMAN
14 Jul 2025 10:02:38,088 INFO : 65% Done
14 Jul 2025 10:02:38,154 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,154 INFO : Inserting sp|P06870|KLK1_HUMAN
14 Jul 2025 10:02:38,225 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,225 INFO : Inserting sp|Q08380|LG3BP_HUMAN
14 Jul 2025 10:02:38,230 INFO : 66% Done
14 Jul 2025 10:02:38,296 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,296 INFO : Inserting sp|Q9BZM5|N2DL2_HUMAN
14 Jul 2025 10:02:38,302 INFO : 67% Done
14 Jul 2025 10:02:38,367 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,367 INFO : Inserting sp|P01009|A1AT_HUMAN
14 Jul 2025 10:02:38,372 INFO : 68% Done
14 Jul 2025 10:02:38,439 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,439 INFO : Inserting sp|P02743|SAMP_HUMAN
14 Jul 2025 10:02:38,444 INFO : 69% Done
14 Jul 2025 10:02:38,512 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,512 INFO : Inserting sp|P01042|KNG1_HUMAN
14 Jul 2025 10:02:38,517 INFO : 70% Done
14 Jul 2025 10:02:38,583 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,583 INFO : Inserting sp|P01033|TIMP1_HUMAN
14 Jul 2025 10:02:38,588 INFO : 71% Done
14 Jul 2025 10:02:38,655 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,655 INFO : Inserting sp|P01034|CYTC_HUMAN
14 Jul 2025 10:02:38,660 INFO : 72% Done
14 Jul 2025 10:02:38,726 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,727 INFO : Inserting sp|P43652|AFAM_HUMAN
14 Jul 2025 10:02:38,733 INFO : 73% Done
14 Jul 2025 10:02:38,799 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,799 INFO : Inserting sp|P16070|CD44_HUMAN
14 Jul 2025 10:02:38,804 INFO : 74% Done
14 Jul 2025 10:02:38,871 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,871 INFO : Inserting sp|P11021|GRP78_HUMAN
14 Jul 2025 10:02:38,942 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:38,942 INFO : Inserting sp|P43490|NAMPT_HUMAN
14 Jul 2025 10:02:38,948 INFO : 75% Done
14 Jul 2025 10:02:39,014 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,014 INFO : Inserting sp|P02766|TTHY_HUMAN
14 Jul 2025 10:02:39,020 INFO : 76% Done
14 Jul 2025 10:02:39,086 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,086 INFO : Inserting sp|P26447|S10A4_HUMAN
14 Jul 2025 10:02:39,091 INFO : 77% Done
14 Jul 2025 10:02:39,159 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,159 INFO : Inserting sp|P04004|VTNC_HUMAN
14 Jul 2025 10:02:39,229 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,229 INFO : Inserting sp|P08758|ANXA5_HUMAN
14 Jul 2025 10:02:39,235 INFO : 78% Done
14 Jul 2025 10:02:39,302 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,303 INFO : Inserting sp|P01011|AACT_HUMAN
14 Jul 2025 10:02:39,307 INFO : 79% Done
14 Jul 2025 10:02:39,373 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,373 INFO : Inserting sp|P02790|HEMO_HUMAN
14 Jul 2025 10:02:39,378 INFO : 80% Done
14 Jul 2025 10:02:39,455 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,455 INFO : Inserting sp|P01019|ANGT_HUMAN
14 Jul 2025 10:02:39,460 INFO : 81% Done
14 Jul 2025 10:02:39,533 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,533 INFO : Inserting sp|Q9ULC6|PADI1_HUMAN
14 Jul 2025 10:02:39,541 INFO : 82% Done
14 Jul 2025 10:02:39,613 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,613 INFO : Inserting sp|Q14697|GANAB_HUMAN
14 Jul 2025 10:02:39,620 INFO : 83% Done
14 Jul 2025 10:02:39,691 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,691 INFO : Inserting sp|P16949|STMN1_HUMAN
14 Jul 2025 10:02:39,697 INFO : 84% Done
14 Jul 2025 10:02:39,763 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,763 INFO : Inserting sp|P09211|GSTP1_HUMAN
14 Jul 2025 10:02:39,769 INFO : 85% Done
14 Jul 2025 10:02:39,838 INFO : 86% Done
14 Jul 2025 10:02:39,920 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:39,920 INFO : Inserting sp|Q14116|IL18_HUMAN
14 Jul 2025 10:02:39,925 INFO : 87% Done
14 Jul 2025 10:02:39,992 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:39,992 INFO : Inserting sp|P01040|CYTA_HUMAN
14 Jul 2025 10:02:39,997 INFO : 88% Done
14 Jul 2025 10:02:40,063 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,063 INFO : Inserting sp|P14625|ENPL_HUMAN
14 Jul 2025 10:02:40,068 INFO : 89% Done
14 Jul 2025 10:02:40,135 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,135 INFO : Inserting sp|P40394|ADH7_HUMAN
14 Jul 2025 10:02:40,141 INFO : 90% Done
14 Jul 2025 10:02:40,207 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,207 INFO : Inserting sp|P02656|APOC3_HUMAN
14 Jul 2025 10:02:40,213 INFO : 91% Done
14 Jul 2025 10:02:40,280 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,280 INFO : Inserting sp|P03956|MMP1_HUMAN
14 Jul 2025 10:02:40,286 INFO : 92% Done
14 Jul 2025 10:02:40,421 DEBUG: Total peptides inserted: 2
14 Jul 2025 10:02:40,421 INFO : Inserting sp|P06733|ENOA_HUMAN
14 Jul 2025 10:02:40,426 INFO : 93% Done
14 Jul 2025 10:02:40,493 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,493 INFO : Inserting sp|P08107|HSP71_HUMAN
14 Jul 2025 10:02:40,498 INFO : 94% Done
14 Jul 2025 10:02:40,565 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,565 INFO : Inserting sp|P23381|SYWC_HUMAN
14 Jul 2025 10:02:40,570 INFO : 95% Done
14 Jul 2025 10:02:40,637 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,637 INFO : Inserting sp|P00338|LDHA_HUMAN
14 Jul 2025 10:02:40,643 INFO : 96% Done
14 Jul 2025 10:02:40,709 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,709 INFO : Inserting sp|O43657|TSN6_HUMAN
14 Jul 2025 10:02:40,715 INFO : 97% Done
14 Jul 2025 10:02:40,783 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,783 INFO : Inserting sp|P32926|DSG3_HUMAN
14 Jul 2025 10:02:40,787 INFO : 98% Done
14 Jul 2025 10:02:40,854 DEBUG: Total peptides inserted: 1
14 Jul 2025 10:02:40,854 INFO : Done parsing Skyline document.
14 Jul 2025 10:02:40,855 INFO : Creating and populating temp tables for Proportion values
14 Jul 2025 10:02:40,878 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
14 Jul 2025 10:02:41,211 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
14 Jul 2025 10:02:41,354 INFO : Cleaning up temp tables
14 Jul 2025 10:02:41,607 INFO : Deleted temp copy of SKYD file
14 Jul 2025 10:02:41,607 INFO : Completed import of Skyline document from DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:41,608 INFO : 100% Done
14 Jul 2025 10:02:41,612 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2025/Chang%20Gung%20University%20HsiaoYC%20Lab%20-%20DSS%20project/@files/export/xar/experiments_and_runs.xar.exploded/Run274116/DSS%20Response%20curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip into the system
14 Jul 2025 10:02:41,847 INFO : Done importing xar
14 Jul 2025 10:02:41,849 INFO : Loading pages and webpart properties
14 Jul 2025 10:02:41,896 INFO : Done importing 3 page(s) with 5 webpart(s)
14 Jul 2025 10:02:41,896 INFO : Loading File Browser config
14 Jul 2025 10:02:41,896 INFO : Done importing File Browser config
14 Jul 2025 10:02:41,897 INFO : Starting Sample Status Data import
14 Jul 2025 10:02:41,897 INFO : No sample types XAR file to process.
14 Jul 2025 10:02:41,897 INFO : Finished importing Sample Status Data
14 Jul 2025 10:02:41,900 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
14 Jul 2025 10:02:41,901 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
14 Jul 2025 10:02:41,902 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
14 Jul 2025 10:02:41,902 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
14 Jul 2025 10:02:41,902 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
14 Jul 2025 10:02:41,902 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
14 Jul 2025 10:02:41,904 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
14 Jul 2025 10:02:41,910 INFO : Moving files to folder /Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project and creating symlinks
14 Jul 2025 10:02:41,911 DEBUG: Moved file /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip to /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:41,912 DEBUG: Created symlink /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip targeting /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:41,913 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/RawFiles
14 Jul 2025 10:02:41,913 DEBUG: Directory created: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02
14 Jul 2025 10:02:41,914 DEBUG: Moved file /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky.view to /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky.view
14 Jul 2025 10:02:41,915 DEBUG: Created symlink /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky.view targeting /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky.view
14 Jul 2025 10:02:41,915 DEBUG: Moved file /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.skyd to /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.skyd
14 Jul 2025 10:02:41,916 DEBUG: Created symlink /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.skyd targeting /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.skyd
14 Jul 2025 10:02:41,917 DEBUG: Moved file /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky to /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky
14 Jul 2025 10:02:41,917 DEBUG: Created symlink /data/labkey/files/Chang Gung University - HsiaoYC Lab/DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky targeting /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.sky
14 Jul 2025 10:02:41,918 INFO : Aligning data files urls in folder: /Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project
14 Jul 2025 10:02:41,919 DEBUG: Setting filePathRoot on copied run: DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip to: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files
14 Jul 2025 10:02:41,921 DEBUG: Setting dataFileUri on copied data: DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip to: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02.sky.zip
14 Jul 2025 10:02:41,922 DEBUG: Setting dataFileUri on copied data: DSS Response curve_105plex_5repeats.skyd to: /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/DSS Response curve_105plex_5repeats_2025-07-11_01-47-02/DSS Response curve_105plex_5repeats.skyd
14 Jul 2025 10:02:41,922 INFO : Updating skydDataIds in folder: /Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project
14 Jul 2025 10:02:41,924 INFO : Importing files metadata.
14 Jul 2025 10:02:41,924 DEBUG: [/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project]  Reading files metadata from /data/labkey/files/Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project/@files/export
14 Jul 2025 10:02:41,925 INFO : 
14 Jul 2025 10:02:41,925 INFO : Experiment import completed successfully.
14 Jul 2025 10:02:41,925 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
14 Jul 2025 10:02:41,940 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
14 Jul 2025 10:02:41,940 INFO : 
14 Jul 2025 10:02:41,940 INFO : Checking for library folders.
14 Jul 2025 10:02:41,941 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
14 Jul 2025 10:02:41,953 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
14 Jul 2025 10:02:41,954 INFO : 
14 Jul 2025 10:02:41,954 INFO : Finishing up experiment copy.
14 Jul 2025 10:02:41,955 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2025/Chang Gung University HsiaoYC Lab - DSS project
14 Jul 2025 10:02:41,955 INFO : Setting version on new experiment to 1
14 Jul 2025 10:02:41,956 INFO : Updating permanent link to point to the new copy of the data.
14 Jul 2025 10:02:41,974 INFO : Removing copy permissions given to Panorama Public
14 Jul 2025 10:02:41,975 INFO : Adding read permissions to all users that are folder admins in the source folder.
14 Jul 2025 10:02:41,976 INFO : Assigning ReaderRole to hschin@mail.cgu.edu.tw
14 Jul 2025 10:02:41,976 INFO : Assigning PanoramaPublicSubmitterRole to hschin@mail.cgu.edu.tw
14 Jul 2025 10:02:41,979 INFO : Adding user hschin@mail.cgu.edu.tw to group Panorama Public Submitters
14 Jul 2025 10:02:41,980 INFO : Updating the 'Raw Data' tab configuration
14 Jul 2025 10:02:41,980 INFO : Making folder public.
14 Jul 2025 10:02:41,982 INFO : Hiding the Data Pipeline tab.
14 Jul 2025 10:02:41,985 INFO : Updating Submission. Setting copiedExperimentId to 2099
14 Jul 2025 10:02:43,455 INFO : Assigning a DOI.
14 Jul 2025 10:02:44,160 INFO : Assigned DOI: 10.6069/zhxv-5279
14 Jul 2025 10:02:44,198 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'