Copying experiment: CEPR2 perceives group II CEPs to regulate cell surface receptor-mediated immunity in Arabidopsis

BayBioMS - Rzemieniewski__CEP14

Job Status

Created: 2025-09-15 16:43:27
Modified: 2025-09-15 16:43:36
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Copying experiment: CEPR2 perceives group II CEPs to regulate cell surface receptor-mediated immunity in Arabidopsis
File Path: /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Experiment_2132.log
Files: Experiment_2132.log
Completed Runs: Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip
Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip

Log File


15 Sep 2025 16:43:27,599 INFO : Copying experiment "CEPR2 perceives group II CEPs to regulate cell surface receptor-mediated immunity in Arabidopsis" from folder /BayBioMS/Rzemieniewski__CEP14 to /Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14
15 Sep 2025 16:43:27,599 INFO : =======================================
15 Sep 2025 16:43:27,629 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
15 Sep 2025 16:43:27,629 INFO :
15 Sep 2025 16:43:27,629 INFO : Exporting experiment.
15 Sep 2025 16:43:30,917 INFO : Exporting files metadata.
15 Sep 2025 16:43:30,931 INFO :
15 Sep 2025 16:43:30,931 INFO : Experiment export completed successfully.
15 Sep 2025 16:43:30,931 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
15 Sep 2025 16:43:30,947 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
15 Sep 2025 16:43:30,947 INFO :
15 Sep 2025 16:43:30,947 INFO : Importing experiment.
15 Sep 2025 16:43:30,949 INFO : Loading folder properties (folder type, settings and active modules)
15 Sep 2025 16:43:30,981 INFO : Done importing folder properties (folder type, settings and active modules)
15 Sep 2025 16:43:30,982 INFO : Loading container specific module properties
15 Sep 2025 16:43:30,986 INFO : Done importing container specific module properties
15 Sep 2025 16:43:30,987 INFO : Loading queries
15 Sep 2025 16:43:30,990 INFO : 1 query imported
15 Sep 2025 16:43:30,990 INFO : Done importing queries
15 Sep 2025 16:43:30,991 INFO : Loading etl definitions
15 Sep 2025 16:43:30,991 INFO : Loading wikis
15 Sep 2025 16:43:30,992 INFO : 0 wikis imported
15 Sep 2025 16:43:30,992 INFO : Done importing wikis
15 Sep 2025 16:43:30,993 INFO : Starting Data Class Importer
15 Sep 2025 16:43:30,993 INFO : No types XAR file to process.
15 Sep 2025 16:43:30,993 INFO : Finished Data Class Importer
15 Sep 2025 16:43:30,993 INFO : Starting to copy files to @files
15 Sep 2025 16:43:30,993 INFO : Copied 0 files to @files
15 Sep 2025 16:43:30,994 INFO : Starting to copy files to @assayfiles
15 Sep 2025 16:43:30,994 INFO : Copied 0 files to @assayfiles
15 Sep 2025 16:43:30,994 INFO : Ensuring exp.data rows exist for imported files
15 Sep 2025 16:43:31,043 INFO : Starting Sample Type Importer
15 Sep 2025 16:43:31,043 INFO : No types XAR file to process.
15 Sep 2025 16:43:31,043 INFO : Finished Sample Type Importer
15 Sep 2025 16:43:31,044 INFO : Loading xar
15 Sep 2025 16:43:31,695 INFO : Starting import from Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip
15 Sep 2025 16:43:31,697 INFO : Starting to import Skyline document from Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip
15 Sep 2025 16:43:31,700 INFO : Expanding Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyd
15 Sep 2025 16:43:31,867 INFO : Expanding Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky.view
15 Sep 2025 16:43:31,868 INFO : Expanding Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky
15 Sep 2025 16:43:31,872 INFO : Expanding Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyl
15 Sep 2025 16:43:31,877 INFO : Reading Skyline file, Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky, to determine if the TransitionChromInfos in the document should be stored...
15 Sep 2025 16:43:31,881 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
15 Sep 2025 16:43:31,881 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
15 Sep 2025 16:43:31,882 INFO : 2% Done
15 Sep 2025 16:43:31,882 INFO : Copying SKYD to temp directory for import purposes
15 Sep 2025 16:43:31,962 INFO : Copying complete
15 Sep 2025 16:43:32,088 INFO : Inserting PROCAL Retention Time Standard Peptides
15 Sep 2025 16:43:32,091 INFO : 9% Done
15 Sep 2025 16:43:32,106 INFO : 15% Done
15 Sep 2025 16:43:32,119 INFO : 22% Done
15 Sep 2025 16:43:32,133 INFO : 28% Done
15 Sep 2025 16:43:32,146 INFO : 36% Done
15 Sep 2025 16:43:32,161 INFO : 43% Done
15 Sep 2025 16:43:32,175 INFO : 50% Done
15 Sep 2025 16:43:32,189 INFO : 57% Done
15 Sep 2025 16:43:32,203 INFO : 65% Done
15 Sep 2025 16:43:32,217 INFO : 72% Done
15 Sep 2025 16:43:32,231 INFO : 78% Done
15 Sep 2025 16:43:32,244 INFO : 85% Done
15 Sep 2025 16:43:32,257 INFO : Inserting CEP4-16mer
15 Sep 2025 16:43:32,259 INFO : 89% Done
15 Sep 2025 16:43:32,279 INFO : Inserting CEP4-15mer
15 Sep 2025 16:43:32,281 INFO : 98% Done
15 Sep 2025 16:43:32,303 INFO : Done parsing Skyline document.
15 Sep 2025 16:43:32,723 INFO : Creating and populating temp tables for Proportion values
15 Sep 2025 16:43:32,727 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
15 Sep 2025 16:43:32,732 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
15 Sep 2025 16:43:32,737 INFO : Cleaning up temp tables
15 Sep 2025 16:43:33,015 INFO : Deleted temp copy of SKYD file
15 Sep 2025 16:43:33,015 INFO : Completed import of Skyline document from Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip
15 Sep 2025 16:43:33,017 INFO : 100% Done
15 Sep 2025 16:43:33,021 INFO : Starting import from Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip
15 Sep 2025 16:43:33,022 INFO : Starting to import Skyline document from Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip
15 Sep 2025 16:43:33,026 INFO : Expanding Rzemieniewski_P155_13_CEP14.skyd
15 Sep 2025 16:43:33,287 INFO : Expanding Rzemieniewski_P155_13_CEP14.sky.view
15 Sep 2025 16:43:33,293 INFO : Expanding Rzemieniewski_P155_13_CEP14.sky
15 Sep 2025 16:43:33,296 INFO : Expanding Rzemieniewski_P155_13_CEP14.skyl
15 Sep 2025 16:43:33,301 INFO : Reading Skyline file, Rzemieniewski_P155_13_CEP14.sky, to determine if the TransitionChromInfos in the document should be stored...
15 Sep 2025 16:43:33,305 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
15 Sep 2025 16:43:33,305 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
15 Sep 2025 16:43:33,308 INFO : 2% Done
15 Sep 2025 16:43:33,308 INFO : Copying SKYD to temp directory for import purposes
15 Sep 2025 16:43:33,373 INFO : Copying complete
15 Sep 2025 16:43:33,486 INFO : Inserting PROCAL Retention Time Standard Peptides
15 Sep 2025 16:43:33,489 INFO : 9% Done
15 Sep 2025 16:43:33,504 INFO : 16% Done
15 Sep 2025 16:43:33,519 INFO : 23% Done
15 Sep 2025 16:43:33,532 INFO : 30% Done
15 Sep 2025 16:43:33,547 INFO : 37% Done
15 Sep 2025 16:43:33,561 INFO : 44% Done
15 Sep 2025 16:43:33,576 INFO : 52% Done
15 Sep 2025 16:43:33,590 INFO : 60% Done
15 Sep 2025 16:43:33,605 INFO : 67% Done
15 Sep 2025 16:43:33,619 INFO : 74% Done
15 Sep 2025 16:43:33,633 INFO : 80% Done
15 Sep 2025 16:43:33,646 INFO : 88% Done
15 Sep 2025 16:43:33,660 INFO : Inserting CEP14-15mer
15 Sep 2025 16:43:33,661 INFO : 91% Done
15 Sep 2025 16:43:33,683 INFO : 95% Done
15 Sep 2025 16:43:33,704 INFO : 98% Done
15 Sep 2025 16:43:33,724 INFO : Done parsing Skyline document.
15 Sep 2025 16:43:34,132 INFO : Creating and populating temp tables for Proportion values
15 Sep 2025 16:43:34,136 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
15 Sep 2025 16:43:34,142 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
15 Sep 2025 16:43:34,147 INFO : Cleaning up temp tables
15 Sep 2025 16:43:34,375 INFO : Deleted temp copy of SKYD file
15 Sep 2025 16:43:34,375 INFO : Completed import of Skyline document from Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip
15 Sep 2025 16:43:34,377 INFO : 100% Done
15 Sep 2025 16:43:34,793 INFO : Done importing xar
15 Sep 2025 16:43:34,794 INFO : Loading pages and webpart properties
15 Sep 2025 16:43:34,839 INFO : Done importing 3 page(s) with 5 webpart(s)
15 Sep 2025 16:43:34,839 INFO : Loading File Browser config
15 Sep 2025 16:43:34,839 INFO : Done importing File Browser config
15 Sep 2025 16:43:34,840 INFO : Starting Sample Status Data import
15 Sep 2025 16:43:34,840 INFO : No sample types XAR file to process.
15 Sep 2025 16:43:34,840 INFO : Finished importing Sample Status Data
15 Sep 2025 16:43:34,844 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
15 Sep 2025 16:43:34,845 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
15 Sep 2025 16:43:34,845 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
15 Sep 2025 16:43:34,846 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
15 Sep 2025 16:43:34,846 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
15 Sep 2025 16:43:34,846 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
15 Sep 2025 16:43:34,847 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
15 Sep 2025 16:43:34,852 INFO : Moving files to folder /Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14 and creating symlinks
15 Sep 2025 16:43:34,864 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.sky updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.sky
15 Sep 2025 16:43:34,873 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.sky.view updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.sky.view
15 Sep 2025 16:43:34,880 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.skyl updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.skyl
15 Sep 2025 16:43:34,886 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.skyd updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30/Rzemieniewski_P155_13_CEP14.skyd
15 Sep 2025 16:43:34,892 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky
15 Sep 2025 16:43:34,898 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky.view updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.sky.view
15 Sep 2025 16:43:34,905 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyd updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyd
15 Sep 2025 16:43:34,912 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyl updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18/Rzemieniewski_P155_13_CEP4_15mer_and_16mer.skyl
15 Sep 2025 16:43:34,919 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_030.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_030.raw
15 Sep 2025 16:43:34,927 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_027.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_027.raw
15 Sep 2025 16:43:34,932 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_036.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_036.raw
15 Sep 2025 16:43:34,937 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_016.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_016.raw
15 Sep 2025 16:43:34,944 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_791_P155_13_PRM_GEH_004_r2.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_791_P155_13_PRM_GEH_004_r2.raw
15 Sep 2025 16:43:34,949 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_021.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_021.raw
15 Sep 2025 16:43:34,954 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_022.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_022.raw
15 Sep 2025 16:43:34,959 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_026.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_026.raw
15 Sep 2025 16:43:34,965 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_791_P155_13_PRM_GEH_003_r2.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_791_P155_13_PRM_GEH_003_r2.raw
15 Sep 2025 16:43:34,971 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_025.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_025.raw
15 Sep 2025 16:43:34,977 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_035.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_035.raw
15 Sep 2025 16:43:34,983 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_032.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_032.raw
15 Sep 2025 16:43:34,988 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_005.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_005.raw
15 Sep 2025 16:43:34,994 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_031.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP4_15mer_and_16mer/BBM_792_P155_13_PRM_GEH_031.raw
15 Sep 2025 16:43:35,001 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_034.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_034.raw
15 Sep 2025 16:43:35,006 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_005_r2.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_005_r2.raw
15 Sep 2025 16:43:35,011 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_029.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_029.raw
15 Sep 2025 16:43:35,018 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_003.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_003.raw
15 Sep 2025 16:43:35,024 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_014.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_014.raw
15 Sep 2025 16:43:35,029 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_001.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_001.raw
15 Sep 2025 16:43:35,035 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_020.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_020.raw
15 Sep 2025 16:43:35,040 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_010.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_010.raw
15 Sep 2025 16:43:35,046 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_008.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_008.raw
15 Sep 2025 16:43:35,052 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_009.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_009.raw
15 Sep 2025 16:43:35,058 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_015.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_015.raw
15 Sep 2025 16:43:35,063 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_004.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_004.raw
15 Sep 2025 16:43:35,068 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_007_r2.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_007_r2.raw
15 Sep 2025 16:43:35,074 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_006_r2.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_791_P155_13_PRM_GEH_006_r2.raw
15 Sep 2025 16:43:35,079 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_033.raw updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/RawFiles/CEP14/BBM_792_P155_13_PRM_GEH_033.raw
15 Sep 2025 16:43:35,086 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP14_2025-04-01_08-09-30.sky.zip
15 Sep 2025 16:43:35,092 INFO : Target for symlink /data/labkey/files/BayBioMS/Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip updated to /data/labkey/files/Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14/@files/Rzemieniewski_P155_13_CEP4_15mer_and_16mer_2025-04-01_08-06-18.sky.zip
15 Sep 2025 16:43:35,094 INFO : Aligning data files urls in folder: /Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14
15 Sep 2025 16:43:35,101 INFO : Updating skydDataIds in folder: /Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14
15 Sep 2025 16:43:35,103 INFO : Importing files metadata.
15 Sep 2025 16:43:35,104 INFO :
15 Sep 2025 16:43:35,104 INFO : Experiment import completed successfully.
15 Sep 2025 16:43:35,104 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
15 Sep 2025 16:43:35,120 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
15 Sep 2025 16:43:35,120 INFO :
15 Sep 2025 16:43:35,120 INFO : Checking for library folders.
15 Sep 2025 16:43:35,121 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
15 Sep 2025 16:43:35,133 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
15 Sep 2025 16:43:35,133 INFO :
15 Sep 2025 16:43:35,133 INFO : Finishing up experiment copy.
15 Sep 2025 16:43:35,136 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2025/BayBioMS - Rzemieniewski__CEP14
15 Sep 2025 16:43:35,136 INFO : Setting version on new experiment to 2
15 Sep 2025 16:43:35,138 INFO : Updating permanent link to point to the new copy of the data.
15 Sep 2025 16:43:35,140 INFO : Removing copy permissions given to Panorama Public
15 Sep 2025 16:43:35,142 INFO : Adding read permissions to all users that are folder admins in the source folder.
15 Sep 2025 16:43:35,143 INFO : Adding read permissions to all users that had read access to previous copy.
15 Sep 2025 16:43:35,143 INFO : Assigning ReaderRole to tina.ludwig@tum.de
15 Sep 2025 16:43:35,143 INFO : Assigning ReaderRole to panorama+reviewer336@proteinms.net
15 Sep 2025 16:43:35,143 INFO : Assigning PanoramaPublicSubmitterRole to tina.ludwig@tum.de
15 Sep 2025 16:43:35,146 INFO : User tina.ludwig@tum.de is already a member of group Panorama Public Submitters
15 Sep 2025 16:43:35,146 INFO : Updating the 'Raw Data' tab configuration
15 Sep 2025 16:43:35,146 INFO : Hiding the Data Pipeline tab.
15 Sep 2025 16:43:35,149 INFO : Creating a new versioned URL for the previous copy of the data: CEP14_v1
15 Sep 2025 16:43:35,180 INFO : Setting the permanent link on the previous copy to CEP14_v1
15 Sep 2025 16:43:35,181 INFO : Updating Submission. Setting copiedExperimentId to 2133
15 Sep 2025 16:43:36,648 INFO : Copying ProteomeXchange ID from the previous copy of the data.
15 Sep 2025 16:43:36,648 INFO : Copying DOI from the previous copy of the data.
15 Sep 2025 16:43:36,648 INFO : Removing DOI from the previous copy
15 Sep 2025 16:43:36,674 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'