Study9S_Site52_v3_2025-03-11_09-06-36.sky.zip: /Schilling/EAD_PTM

Study9S_Site52_v3_2025-03-11_09-06-36.sky.zip

EAD_PTM

Document Summary

Study9S_Site52_v3_2025-03-11_09-06-36.sky.zip 1 version

5 proteins, 9 peptides, 9 precursors, 43 transitions - 13 replicates - Skyline (64-bit) 22.2.0.351 (28f9b9301)

Transition List

129823|Lactoperoxidase

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Fragment Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q3 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q3 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
DGGIDPLVR		0	940.4978		DGGIDPLVR		light	940.4978	471.2562	2+	y7	769.4567	1+
DGGIDPLVR		0	940.4978		DGGIDPLVR		light	940.4978	471.2562	2+	y6	712.4352	1+
DGGIDPLVR		0	940.4978		DGGIDPLVR		light	940.4978	471.2562	2+	y5	599.3511	1+
DGGIDPLVR		0	940.4978		DGGIDPLVR		light	940.4978	471.2562	2+	y4	484.3242	1+
DGGIDPLVR		0	940.4978		DGGIDPLVR		light	940.4978	471.2562	2+	y1	175.1190	1+
GFCGLSQPK		0	993.4590		GFCGLSQPK		light	993.4590	497.7368	2+	y7	790.3764	1+
GFCGLSQPK		0	993.4590		GFCGLSQPK		light	993.4590	497.7368	2+	y6	629.3617	1+
GFCGLSQPK		0	993.4590		GFCGLSQPK		light	993.4590	497.7368	2+	y4	459.2562	1+
GFCGLSQPK		0	993.4590		GFCGLSQPK		light	993.4590	497.7368	2+	y3	372.2241	1+
GFCGLSQPK		0	993.4590		GFCGLSQPK		light	993.4590	497.7368	2+	y2	244.1656	1+
VGPLLACLLGR		0	1168.6638		VGPLLACLLGR		light	1168.6638	585.3392	2+	y8	916.5284	1+
VGPLLACLLGR		0	1168.6638		VGPLLACLLGR		light	1168.6638	585.3392	2+	y7	803.4444	1+
VGPLLACLLGR		0	1168.6638		VGPLLACLLGR		light	1168.6638	585.3392	2+	y6	690.3603	1+
VGPLLACLLGR		0	1168.6638		VGPLLACLLGR		light	1168.6638	585.3392	2+	y5	619.3232	1+
VGPLLACLLGR		0	1168.6638		VGPLLACLLGR		light	1168.6638	585.3392	2+	y2	232.1404	1+

00716246|Carbonic

Anhydrase

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Fragment Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q3 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q3 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
VLDALDSIK		0	972.5492		VLDALDSIK		light	972.5492	487.2819	2+	y8	874.4880	1+
VLDALDSIK		0	972.5492		VLDALDSIK		light	972.5492	487.2819	2+	y7	761.4040	1+
VLDALDSIK		0	972.5492		VLDALDSIK		light	972.5492	487.2819	2+	y6	646.3770	1+
VLDALDSIK		0	972.5492		VLDALDSIK		light	972.5492	487.2819	2+	y5	575.3399	1+
VLDALDSIK		0	972.5492		VLDALDSIK		light	972.5492	487.2819	2+	y4	462.2558	1+

118533|Glutamate

Dehydrogenase

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Fragment Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q3 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q3 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
DDGSWEVIEGYR		0	1424.6208		DDGSWEVIEGYR		light	1424.6208	713.3177	2+	y8	1051.5207	1+
DDGSWEVIEGYR		0	1424.6208		DDGSWEVIEGYR		light	1424.6208	713.3177	2+	y7	865.4414	1+
DDGSWEVIEGYR		0	1424.6208		DDGSWEVIEGYR		light	1424.6208	713.3177	2+	y6	736.3988	1+
DDGSWEVIEGYR		0	1424.6208		DDGSWEVIEGYR		light	1424.6208	713.3177	2+	y5	637.3304	1+
DDGSWEVIEGYR		0	1424.6208		DDGSWEVIEGYR		light	1424.6208	713.3177	2+	y3	395.2037	1+
CAVVDVPFGGAK		0	1219.5907		CAVVDVPFGGAK		light	1219.5907	610.8026	2+	y9	889.4778	1+
CAVVDVPFGGAK		0	1219.5907		CAVVDVPFGGAK		light	1219.5907	610.8026	2+	y8	790.4094	1+
CAVVDVPFGGAK		0	1219.5907		CAVVDVPFGGAK		light	1219.5907	610.8026	2+	y7	675.3824	1+
CAVVDVPFGGAK		0	1219.5907		CAVVDVPFGGAK		light	1219.5907	610.8026	2+	y6	576.3140	1+
CAVVDVPFGGAK		0	1219.5907		CAVVDVPFGGAK		light	1219.5907	610.8026	2+	y4	332.1928	1+
TAAYVNAIEK		0	1078.5659		TAAYVNAIEK		light	1078.5659	540.2902	2+	y7	836.4512	1+
TAAYVNAIEK		0	1078.5659		TAAYVNAIEK		light	1078.5659	540.2902	2+	y6	673.3879	1+
TAAYVNAIEK		0	1078.5659		TAAYVNAIEK		light	1078.5659	540.2902	2+	y5	574.3195	1+

Casein

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Fragment Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q3 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q3 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
FFVAPFPEVFGK		0	1383.7227		FFVAPFPEVFGK		light	1383.7227	692.8686	2+	y10	1090.5932	1+
FFVAPFPEVFGK		0	1383.7227		FFVAPFPEVFGK		light	1383.7227	692.8686	2+	y9	991.5247	1+
FFVAPFPEVFGK		0	1383.7227		FFVAPFPEVFGK		light	1383.7227	692.8686	2+	y8	920.4876	1+
FFVAPFPEVFGK		0	1383.7227		FFVAPFPEVFGK		light	1383.7227	692.8686	2+	y3	351.2027	1+
FFVAPFPEVFGK		0	1383.7227		FFVAPFPEVFGK		light	1383.7227	692.8686	2+	y8	460.7475	2+

Albumin

Peptide Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Peptide Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Missed Cleavages Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Peptide Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Rank Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Precursor Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Annotations Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Label Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Precursor Neutral Mass Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q1 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Fragment Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Bar Chart Pie Chart Quick Chart	Q3 m/z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart	Q3 Z Sort Ascending Sort Descending Clear Sort Filter... Clear Filter Remove Column Summary Statistics... Box & Whisker Quick Chart
LVNELTEFAK		0	1162.6234		LVNELTEFAK		light	1162.6234	582.3190	2+	y9	1050.5466	1+
LVNELTEFAK		0	1162.6234		LVNELTEFAK		light	1162.6234	582.3190	2+	y8	951.4782	1+
LVNELTEFAK		0	1162.6234		LVNELTEFAK		light	1162.6234	582.3190	2+	y7	837.4353	1+
LVNELTEFAK		0	1162.6234		LVNELTEFAK		light	1162.6234	582.3190	2+	y6	708.3927	1+
LVNELTEFAK		0	1162.6234		LVNELTEFAK		light	1162.6234	582.3190	2+	y5	595.3086	1+