07 Dec 2024 21:02:17,155 INFO : Validating data for a ProteomeXchange submission.

07 Dec 2024 21:02:17,156 INFO : =======================================

07 Dec 2024 21:02:17,167 DEBUG: Resetting Job ID: 2fa3cc45-974f-103d-b7af-8d1d6db23074

07 Dec 2024 21:02:17,185 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'

07 Dec 2024 21:02:17,186 INFO : Validating data for experiment Id: 1954, validation Id: 1233

07 Dec 2024 21:02:17,242 INFO : Validating data for 4 Skyline documents in 1 folders

07 Dec 2024 21:02:21,550 INFO : Sample file validation for Skyline document: PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:02:21,550 INFO :   Found all sample files.

07 Dec 2024 21:04:04,511 INFO : Sample file validation for Skyline document: ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:04,513 INFO :   Found all sample files.

07 Dec 2024 21:04:07,880 INFO : Sample file validation for Skyline document: ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:07,880 INFO :   Found all sample files.

07 Dec 2024 21:04:42,347 INFO : Sample file validation for Skyline document: ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,347 INFO :   Found all sample files.

07 Dec 2024 21:04:42,437 INFO : Modifications validation:

07 Dec 2024 21:04:42,437 INFO : VALID MODIFICATIONS:

07 Dec 2024 21:04:42,437 INFO : 9143: 3-deoxyglucosone (R): UNIMOD:949 - 3-deoxyglucosone

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9147: Didehydro (S): UNIMOD:401 - Didehydro

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9148: Dehydrated (T): UNIMOD:23 - Dehydrated

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9152: Carbamidomethyl (E): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9154: Oxidation (N): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9167: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,437 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9174: Gln->pyro-Glu (N-term Q): UNIMOD:28 - Gln->pyro-Glu

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9175: Oxidation (P): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,437 INFO : 9176: Ammonia-loss (N): UNIMOD:385 - Ammonia-loss

07 Dec 2024 21:04:42,437 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,438 INFO : 9177: Oxidation (D): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,438 INFO : 9178: GlyGly (C): UNIMOD:121 - GG

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,438 INFO : 9179: Formyl (K): UNIMOD:122 - Formyl

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,438 INFO : 9180: Oxidation (HW): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,438 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,438 INFO : 9182: Deamidated (NQ): UNIMOD:7 - Deamidated

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9183: Cation:Na (DE): UNIMOD:30 - Cation:Na

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9185: Oxidation (M): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,439 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9186: Dehydrated (Y): UNIMOD:23 - Dehydrated

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9187: Carbamidomethyl (N-term): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9188: Dioxidation (P): UNIMOD:425 - Dioxidation

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9189: Carbamidomethyl (K): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9190: Carbamidomethyl (H): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9191: Carbamyl (K): UNIMOD:5 - Carbamyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9192: Dioxidation (F): UNIMOD:425 - Dioxidation

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9193: Oxidation (Y): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9194: HNE (H): UNIMOD:53 - HNE

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9195: Dethiomethyl (M): UNIMOD:526 - Dethiomethyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9196: Hex (K): UNIMOD:41 - Hex

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9197: HNE (K): UNIMOD:53 - HNE

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9198: Dioxidation (K): UNIMOD:425 - Dioxidation

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9199: Carbamidomethyl (D): UNIMOD:4 - Carbamidomethyl

07 Dec 2024 21:04:42,439 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,439 INFO : 9201: Dehydrated (D): UNIMOD:23 - Dehydrated

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9202: Carbamyl (N-term): UNIMOD:5 - Carbamyl

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9203: Dehydrated (S): UNIMOD:23 - Dehydrated

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9205: Methyl (DE): UNIMOD:34 - Methyl

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9206: Biotin (N-term): UNIMOD:3 - Biotin

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9210: Glu->pyro-Glu (N-term E): UNIMOD:27 - Glu->pyro-Glu

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9218: Oxidation (K): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9219: Dioxidation (Y): UNIMOD:425 - Dioxidation

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9220: Formyl (N-term): UNIMOD:122 - Formyl

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9227: Dioxidation (W): UNIMOD:425 - Dioxidation

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9230: Cation:Na (C-term): UNIMOD:30 - Cation:Na

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9236: Oxidation (R): UNIMOD:35 - Oxidation

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : INVALID MODIFICATIONS (No Unimod ID):

07 Dec 2024 21:04:42,440 INFO : 9140: ARP_mda_ma: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9141: ARP_sc_amid_plus14ox_glu: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9142: ARP_sc_amid_plus14ox_asp: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9144: ARP_C2H2N2O: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9145: ARP_hexose: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9146: ARP_aldomine: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9149: ARP_diacetyl_sb: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9150: ARP_diacetyl_ma: No UNIMOD Id

07 Dec 2024 21:04:42,440 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,440 INFO : 9151: ARP_lys_fdp: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9153: ARP_one_ma: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9155: ARP_one_sb: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9156: ARP_acrolein_ma: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9157: ARP_ohe_ma: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9158: ARP_ohe_sb: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9159: ARP_go: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9160: ARP_go_minusH2O: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9161: ARP_ser_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9162: ARP_lys_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9163: ARP_lys_ox_minCH2: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9164: ARP_pro_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9165: ARP_thr_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9166: ARP_arg_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9168: ARP_glu_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9169: ARP_asp_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9170: ARP_met_ox: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9171: ARP_leu-ile_ox_minCH2: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9172: ARP_deoxyglucosone_sb: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9173: ARP_bb_cleavage_N-term: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,441 INFO : 9181: ARP_P2A_ma: No UNIMOD Id

07 Dec 2024 21:04:42,441 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9184: ARP_Cys_355: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9200: ARP_C3H2N2O: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9204: ARP_C5H4O2: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9207: ARP_sc_plus14_asn: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9208: ARP_trp_ox: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9209: ARP_trp_formykynurenine: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9211: ARP_glu_ox_bb_cleavage: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9212: ARP_asn_ox_cleavage: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9213: ARP_C2H2N2O2: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9214: ARP_sc_plus14_asp: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9215: ARP_his_ox: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9216: ARP_mda_sb: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9217: ARP_C3H2O3: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9221: ARP_asp_glu_ox_2: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9222: ARP_lys_ox_minCH4: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9223: ARP_t1_pyrraline_minH2: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9224: ARP_gln_asn_ox_2: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9225: ARP_DHPK: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9226: ARP_sulfenic: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9228: ARP_asp_ox_cleavage: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9229: ARP_DHPF: No UNIMOD Id

07 Dec 2024 21:04:42,442 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,442 INFO : 9231: lcBHZ_OxThrRed (T): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9232: ARP_t2_bis_acrolein_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9233: lcBHZ_OxArgRed (R): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9234: ARP_t1_pyrraline: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9235: lcBHZ_OxLysRed (K): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9237: ARP_isoimide: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9238: lcBHZ_OxProRed (P): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9239: ARP_imide: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9240: lcBHZ_OxPlus14Red (LVKRIEAQ): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9241: lcBHZ_DecarboxylationRed (DE): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9242: lcBHZ_OxMetRed (M): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9243: lcBHZ_ImideRed (NQ): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9244: lcBHZ_IsoimideRed (DE): No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9245: ARP_sc_plus14_leu: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9246: ARP_sc_plus14_lys: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9247: ARP_sc_plus14_val: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9248: ARP_sc_plus14_ala: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9249: ARP_sc_plus14_gln: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9250: ARP_sc_plus14_glu: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9251: ARP_pentenal_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9252: ARP_crotonoaldehyde_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9253: ARP_hne_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9254: ARP_hhe_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,443 INFO : 9255: ARP_mgo_ma: No UNIMOD Id

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

07 Dec 2024 21:04:42,443 INFO :     ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip

07 Dec 2024 21:04:42,445 INFO : Validating spectral library: lcBHZ_Havelund_PEAKS.blib

07 Dec 2024 21:04:52,636 INFO : 'lcBHZ_Havelund_PEAKS' (lcBHZ_Havelund_PEAKS.blib) library in 1 Skyline documents was built with 5 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:04:52,638 INFO : Validating spectral library: ARP_Serum_RA_NonEnriched_Transfer_PEAKS_PTM_AGES_1perc.blib

07 Dec 2024 21:04:58,830 INFO : 'ARP-Serum_RA_NonEnriched_Transfer_PEAKS_PTM-AGES_1perc' (ARP_Serum_RA_NonEnriched_Transfer_PEAKS_PTM_AGES_1perc.blib) library in 1 Skyline documents was built with 6 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:04:58,832 INFO : Validating spectral library: PXD023738_PEAKS_5perc_PepLevel_reanalysis.blib

07 Dec 2024 21:05:07,550 INFO : 'PXD023738_PEAKS_5perc_PepLevel_reanalysis' (PXD023738_PEAKS_5perc_PepLevel_reanalysis.blib) library in 2 Skyline documents was built with 9 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:05:07,551 INFO : Validating spectral library: ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.blib

07 Dec 2024 21:05:29,871 INFO : 'ARP-Serum_RA_enr_HD-DDA_Transfer_strict_1perc' (ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.blib) library in 2 Skyline documents was built with 25 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:05:29,873 INFO : Validating spectral library: ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.blib

07 Dec 2024 21:05:58,048 INFO : 'ARP-Serum_RA_enr_HD-DDA_Trap_strict_1perc' (ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.blib) library in 2 Skyline documents was built with 30 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:05:58,050 INFO : Validating spectral library: ARP_Serum_RA_NonEnriched_Trap_PEAKS_PTM_AGES_1perc.blib

07 Dec 2024 21:06:04,437 INFO : 'ARP-Serum_RA_NonEnriched_Trap_PEAKS_PTM-AGES_1perc' (ARP_Serum_RA_NonEnriched_Trap_PEAKS_PTM_AGES_1perc.blib) library in 1 Skyline documents was built with 6 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:06:04,439 INFO : Validating spectral library: lcBHZ_Havelund_PD_MASCOT.blib

07 Dec 2024 21:06:21,397 INFO : 'lcBHZ_Havelund_PD_MASCOT' (lcBHZ_Havelund_PD_MASCOT.blib) library in 1 Skyline documents was built with 5 raw files; 5 peptide Id files. Status: VALID

07 Dec 2024 21:06:21,399 INFO : Validating spectral library: Synapt_NonEnriched_clinical_set_prosit.blib

07 Dec 2024 21:06:23,103 INFO : 'Synapt_NonEnriched_clinical_set_prosit' (Synapt_NonEnriched_clinical_set_prosit.blib) library in 1 Skyline documents was built with 1 raw files; 0 peptide Id files. Status: Prosit / Koina Library

07 Dec 2024 21:06:23,103 INFO :   MISSING FILES:

07 Dec 2024 21:06:23,103 INFO :     Spectrum File: Prositintensity_prosit_publication_v1

07 Dec 2024 21:06:23,104 INFO : Validating spectral library: lcBHZ_Havelund_PD_MASCOT_RepIon_removed.blib

07 Dec 2024 21:06:40,000 INFO : 'lcBHZ_Havelund_PD_MASCOT_RepIon_removed' (lcBHZ_Havelund_PD_MASCOT_RepIon_removed.blib) library in 1 Skyline documents was built with 5 raw files; 5 peptide Id files. Status: Missing spectrum  files.

07 Dec 2024 21:06:40,001 INFO :   MISSING FILES:

07 Dec 2024 21:06:40,001 INFO :     Spectrum File: Diag.removed_QHF0006.mgf

07 Dec 2024 21:06:40,001 INFO :     Spectrum File: Diag.removed_QHF0009.mgf

07 Dec 2024 21:06:40,001 INFO :     Spectrum File: Diag.removed_QHF0012.mgf

07 Dec 2024 21:06:40,001 INFO :     Spectrum File: Diag.removed_QHF0013.mgf

07 Dec 2024 21:06:40,001 INFO :     Spectrum File: Diag.removed_QHF0015.mgf

07 Dec 2024 21:06:40,002 INFO : Validating spectral library: ARP_Serum_clinical_enr_HD_DDA_Transfer_PrefList_C3H2N2O_1perc.blib

07 Dec 2024 21:07:04,817 INFO : 'ARP_Serum_clinical_enr_HD_DDA_Transfer_PrefList_C3H2N2O_1perc' (ARP_Serum_clinical_enr_HD_DDA_Transfer_PrefList_C3H2N2O_1perc.blib) library in 1 Skyline documents was built with 25 raw files; 1 peptide Id files. Status: VALID

07 Dec 2024 21:07:04,817 INFO : Spectral library validation complete.

07 Dec 2024 21:07:04,818 INFO : Data validation is complete. Status is IncompleteMetadata

07 Dec 2024 21:07:04,818 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'