Copying experiment: Screening of protein carbonylation sites in human serum by ion mobility mass spectrometry

U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis

Job Status

Created: 2024-12-07 17:40:51
Modified: 2024-12-07 19:49:28
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Copying experiment: Screening of protein carbonylation sites in human serum by ion mobility mass spectrometry
File Path: /data/labkey/files/Panorama Public/2024/U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis/@files/Experiment_2036.log
Files: Experiment_2036.log
Completed Runs: ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip
PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip
ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip
ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip

Log File


07 Dec 2024 17:40:51,657 INFO : Copying experiment "Screening of protein carbonylation sites in human serum by ion mobility mass spectrometry" from folder /U of Leipzig - AG Bioanalytics/Carbonylation PTMs/Carbonylation in Rheumatoid Arthritis to /Panorama Public/2024/U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis
07 Dec 2024 17:40:51,657 INFO : =======================================
07 Dec 2024 17:59:43,229 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
07 Dec 2024 17:59:43,229 INFO :
07 Dec 2024 17:59:43,229 INFO : Exporting experiment.
07 Dec 2024 18:16:03,217 INFO : Exporting files metadata.
07 Dec 2024 18:16:05,008 INFO :
07 Dec 2024 18:16:05,008 INFO : Experiment export completed successfully.
07 Dec 2024 18:16:05,008 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
07 Dec 2024 18:40:02,530 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
07 Dec 2024 18:40:02,531 INFO :
07 Dec 2024 18:40:02,531 INFO : Importing experiment.
07 Dec 2024 18:40:02,535 INFO : Loading folder properties (folder type, settings and active modules)
07 Dec 2024 18:40:02,594 INFO : Done importing folder properties (folder type, settings and active modules)
07 Dec 2024 18:40:02,595 INFO : Loading container specific module properties
07 Dec 2024 18:40:02,601 INFO : Done importing container specific module properties
07 Dec 2024 18:40:02,603 INFO : Loading queries
07 Dec 2024 18:40:02,608 INFO : 1 query imported
07 Dec 2024 18:40:02,608 INFO : Done importing queries
07 Dec 2024 18:40:02,609 INFO : Loading etl definitions
07 Dec 2024 18:40:02,610 INFO : Loading wikis
07 Dec 2024 18:40:02,753 INFO : 4 wikis imported
07 Dec 2024 18:40:02,753 INFO : Done importing wikis
07 Dec 2024 18:40:02,754 INFO : Starting Data Class Importer
07 Dec 2024 18:40:02,754 INFO : No types XAR file to process.
07 Dec 2024 18:40:02,754 INFO : Finished Data Class Importer
07 Dec 2024 18:40:02,755 INFO : Starting to copy files
07 Dec 2024 18:40:02,755 INFO : Copied 0 files
07 Dec 2024 18:40:02,755 INFO : Ensuring exp.data rows exist for imported files
07 Dec 2024 18:40:02,832 INFO : Starting Sample Type Importer
07 Dec 2024 18:40:02,833 INFO : No types XAR file to process.
07 Dec 2024 18:40:02,833 INFO : Finished Sample Type Importer
07 Dec 2024 18:40:02,833 INFO : Loading xar
07 Dec 2024 18:43:29,121 INFO : Starting import from PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip
07 Dec 2024 18:43:29,123 INFO : Starting to import Skyline document from PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip
07 Dec 2024 18:43:29,162 INFO : Expanding Human_210604_DnaK.protdb
07 Dec 2024 18:43:31,448 INFO : Expanding lcBHZ_HumanPlasma.irtdb
07 Dec 2024 18:43:31,450 INFO : Expanding lcBHZ_Havelund_PEAKS.blib
07 Dec 2024 18:43:31,554 INFO : Expanding lcBHZ_Havelund_PEAKS.redundant.blib
07 Dec 2024 18:43:31,802 INFO : Expanding lcBHZ_Havelund_PD_MASCOT.blib
07 Dec 2024 18:43:31,822 INFO : Expanding lcBHZ_Havelund_PD_MASCOT.redundant.blib
07 Dec 2024 18:43:31,877 INFO : Expanding lcBHZ_Havelund_PD_MASCOT_RepIon_removed.blib
07 Dec 2024 18:43:31,891 INFO : Expanding lcBHZ_Havelund_PD_MASCOT_RepIon_removed.redundant.blib
07 Dec 2024 18:43:31,926 INFO : Expanding PXD002966_lc-BHZ_Plasma.skyd
07 Dec 2024 18:43:34,564 INFO : Expanding PXD002966_lc-BHZ_Plasma.sky.view
07 Dec 2024 18:43:34,564 INFO : Expanding PXD002966_lc-BHZ_Plasma.sky
07 Dec 2024 18:43:34,580 INFO : Expanding PXD002966_lc-BHZ_Plasma.skyl
07 Dec 2024 18:43:34,584 INFO : Reading Skyline file, PXD002966_lc-BHZ_Plasma.sky, to determine if the TransitionChromInfos in the document should be stored...
07 Dec 2024 18:43:34,607 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
07 Dec 2024 18:43:34,607 WARN : The version of this Skyline document is 23.12. This is newer than the highest supported version 23.1
07 Dec 2024 18:43:34,609 INFO : 1% Done
07 Dec 2024 18:43:38,233 INFO : Inserting sp|A0A0C4DH25|KVD20_HUMAN
07 Dec 2024 18:43:38,242 INFO : Inserting sp|A6NIH7|U119B_HUMAN
07 Dec 2024 18:43:38,250 INFO : Inserting sp|P84103|SRSF3_HUMAN
07 Dec 2024 18:43:38,257 INFO : Inserting sp|A0A087WSZ0|KVD08_HUMAN
07 Dec 2024 18:43:38,263 INFO : Inserting sp|A0A0B4J1V0|HV315_HUMAN
07 Dec 2024 18:43:38,268 INFO : Inserting sp|Q5XX13|FBW10_HUMAN
07 Dec 2024 18:43:38,272 INFO : 2% Done
07 Dec 2024 18:43:38,276 INFO : Inserting sp|A0A0C4DH30|HV316_HUMAN
07 Dec 2024 18:43:38,286 INFO : Inserting sp|B9A064|IGLL5_HUMAN
07 Dec 2024 18:43:38,304 INFO : Inserting sp|P01860|IGHG3_HUMAN
07 Dec 2024 18:43:38,308 INFO : 3% Done
07 Dec 2024 18:43:38,318 INFO : Inserting sp|P01861|IGHG4_HUMAN
07 Dec 2024 18:43:38,332 INFO : Inserting sp|P01877|IGHA2_HUMAN
07 Dec 2024 18:43:38,338 INFO : Inserting sp|P0C0L4|CO4A_HUMAN
07 Dec 2024 18:43:38,342 INFO : 4% Done
07 Dec 2024 18:43:38,346 INFO : Inserting sp|P0CF74|IGLC6_HUMAN
07 Dec 2024 18:43:38,360 INFO : Inserting sp|P0DOY3|IGLC3_HUMAN
07 Dec 2024 18:43:38,374 INFO : 5% Done
07 Dec 2024 18:43:38,378 INFO : Inserting sp|P25311|ZA2G_HUMAN
07 Dec 2024 18:43:38,384 INFO : Inserting sp|P69905|HBA_HUMAN
07 Dec 2024 18:43:38,390 INFO : Inserting sp|Q86V48|LUZP1_HUMAN
07 Dec 2024 18:43:38,397 INFO : Inserting sp|Q8NHV4|NEDD1_HUMAN
07 Dec 2024 18:43:38,404 INFO : Inserting sp|Q9NQ75|CASS4_HUMAN
07 Dec 2024 18:43:38,411 INFO : 6% Done
07 Dec 2024 18:43:38,411 INFO : Inserting sp|O75717|WDHD1_HUMAN
07 Dec 2024 18:43:38,418 INFO : Inserting sp|P00450|CERU_HUMAN
07 Dec 2024 18:43:38,440 INFO : 7% Done
07 Dec 2024 18:43:38,451 INFO : Inserting sp|P00451|FA8_HUMAN
07 Dec 2024 18:43:38,458 INFO : Inserting sp|P00738|HPT_HUMAN
07 Dec 2024 18:43:38,472 INFO : 8% Done
07 Dec 2024 18:43:38,498 INFO : 9% Done
07 Dec 2024 18:43:38,515 INFO : Inserting sp|P00751|CFAB_HUMAN
07 Dec 2024 18:43:38,526 INFO : 10% Done
07 Dec 2024 18:43:38,530 INFO : Inserting sp|P01008|ANT3_HUMAN
07 Dec 2024 18:43:38,536 INFO : Inserting sp|P01009|A1AT_HUMAN
07 Dec 2024 18:43:38,561 INFO : 11% Done
07 Dec 2024 18:43:38,590 INFO : 12% Done
07 Dec 2024 18:43:38,618 INFO : 13% Done
07 Dec 2024 18:43:38,618 INFO : Inserting sp|P01011|AACT_HUMAN
07 Dec 2024 18:43:38,638 INFO : Inserting sp|P01019|ANGT_HUMAN
07 Dec 2024 18:43:38,649 INFO : 14% Done
07 Dec 2024 18:43:38,649 INFO : Inserting sp|P01023|A2MG_HUMAN
07 Dec 2024 18:43:38,676 INFO : Inserting sp|P01024|CO3_HUMAN
07 Dec 2024 18:43:38,679 INFO : 15% Done
07 Dec 2024 18:43:38,705 INFO : 16% Done
07 Dec 2024 18:43:38,728 INFO : Inserting sp|P01042|KNG1_HUMAN
07 Dec 2024 18:43:38,735 INFO : 17% Done
07 Dec 2024 18:43:38,739 INFO : Inserting sp|P01602|KV105_HUMAN
07 Dec 2024 18:43:38,745 INFO : Inserting sp|P01619|KV320_HUMAN
07 Dec 2024 18:43:38,751 INFO : Inserting sp|P01834|IGKC_HUMAN
07 Dec 2024 18:43:38,772 INFO : 18% Done
07 Dec 2024 18:43:38,798 INFO : 19% Done
07 Dec 2024 18:43:38,819 INFO : Inserting sp|P01859|IGHG2_HUMAN
07 Dec 2024 18:43:38,830 INFO : 20% Done
07 Dec 2024 18:43:38,858 INFO : 21% Done
07 Dec 2024 18:43:38,859 INFO : Inserting sp|P01871|IGHM_HUMAN
07 Dec 2024 18:43:38,868 INFO : Inserting sp|P01876|IGHA1_HUMAN
07 Dec 2024 18:43:38,875 INFO : Inserting sp|P02647|APOA1_HUMAN
07 Dec 2024 18:43:38,893 INFO : 22% Done
07 Dec 2024 18:43:38,923 INFO : 23% Done
07 Dec 2024 18:43:38,949 INFO : 24% Done
07 Dec 2024 18:43:38,983 INFO : 25% Done
07 Dec 2024 18:43:39,010 INFO : Inserting sp|P02652|APOA2_HUMAN
07 Dec 2024 18:43:39,036 INFO : 26% Done
07 Dec 2024 18:43:39,049 INFO : Inserting sp|P02656|APOC3_HUMAN
07 Dec 2024 18:43:39,055 INFO : Inserting sp|P02671|FIBA_HUMAN
07 Dec 2024 18:43:39,070 INFO : 27% Done
07 Dec 2024 18:43:39,102 INFO : 28% Done
07 Dec 2024 18:43:39,131 INFO : 29% Done
07 Dec 2024 18:43:39,154 INFO : Inserting sp|P02675|FIBB_HUMAN
07 Dec 2024 18:43:39,158 INFO : 30% Done
07 Dec 2024 18:43:39,173 INFO : Inserting sp|P02679|FIBG_HUMAN
07 Dec 2024 18:43:39,192 INFO : 31% Done
07 Dec 2024 18:43:39,199 INFO : Inserting sp|P02743|SAMP_HUMAN
07 Dec 2024 18:43:39,206 INFO : Inserting sp|P02751|FINC_HUMAN
07 Dec 2024 18:43:39,216 INFO : Inserting sp|P02763|A1AG1_HUMAN
07 Dec 2024 18:43:39,223 INFO : 32% Done
07 Dec 2024 18:43:39,227 INFO : Inserting sp|P02766|TTHY_HUMAN
07 Dec 2024 18:43:39,237 INFO : Inserting sp|P02768|ALBU_HUMAN
07 Dec 2024 18:43:39,255 INFO : 33% Done
07 Dec 2024 18:43:39,277 INFO : 34% Done
07 Dec 2024 18:43:39,311 INFO : 35% Done
07 Dec 2024 18:43:39,337 INFO : 36% Done
07 Dec 2024 18:43:39,364 INFO : 37% Done
07 Dec 2024 18:43:39,393 INFO : 38% Done
07 Dec 2024 18:43:39,422 INFO : 39% Done
07 Dec 2024 18:43:39,442 INFO : 40% Done
07 Dec 2024 18:43:39,478 INFO : 41% Done
07 Dec 2024 18:43:39,505 INFO : 42% Done
07 Dec 2024 18:43:39,526 INFO : 43% Done
07 Dec 2024 18:43:39,557 INFO : 44% Done
07 Dec 2024 18:43:39,560 INFO : Inserting sp|P02787|TRFE_HUMAN
07 Dec 2024 18:43:39,588 INFO : 45% Done
07 Dec 2024 18:43:39,598 INFO : Inserting sp|P04114|APOB_HUMAN
07 Dec 2024 18:43:39,612 INFO : 46% Done
07 Dec 2024 18:43:39,616 INFO : Inserting sp|P06396|GELS_HUMAN
07 Dec 2024 18:43:39,622 INFO : Inserting sp|P06727|APOA4_HUMAN
07 Dec 2024 18:43:39,632 INFO : Inserting sp|P0C0L5|CO4B_HUMAN
07 Dec 2024 18:43:39,638 INFO : Inserting sp|P0DP09|KV113_HUMAN
07 Dec 2024 18:43:39,644 INFO : Inserting sp|P19237|TNNI1_HUMAN
07 Dec 2024 18:43:39,647 INFO : 47% Done
07 Dec 2024 18:43:39,651 INFO : Inserting sp|P19823|ITIH2_HUMAN
07 Dec 2024 18:43:39,657 INFO : Inserting sp|P19827|ITIH1_HUMAN
07 Dec 2024 18:43:39,663 INFO : Inserting sp|P20742|PZP_HUMAN
07 Dec 2024 18:43:39,677 INFO : Inserting sp|P68871|HBB_HUMAN
07 Dec 2024 18:43:39,681 INFO : 48% Done
07 Dec 2024 18:43:39,684 INFO : Inserting sp|Q14624|ITIH4_HUMAN
07 Dec 2024 18:43:39,698 INFO : Inserting sp|Q5VZK9|CARL1_HUMAN
07 Dec 2024 18:43:39,704 INFO : Inserting sp|Q96GW7|PGCB_HUMAN
07 Dec 2024 18:43:39,710 INFO : Inserting sp|Q96HP0|DOCK6_HUMAN
07 Dec 2024 18:43:39,713 INFO : 49% Done
07 Dec 2024 18:43:39,717 INFO : Inserting sp|Q9Y5E1|PCDB9_HUMAN
07 Dec 2024 18:43:39,724 INFO : Inserting Decoys
07 Dec 2024 18:43:39,727 WARN : 'lcBHZ_Havelund_MSAmanda_ImideIsoimide' library was not found in settings.
07 Dec 2024 18:43:39,740 INFO : 50% Done
07 Dec 2024 18:43:39,765 INFO : 51% Done
07 Dec 2024 18:43:39,796 INFO : 52% Done
07 Dec 2024 18:43:39,822 INFO : 53% Done
07 Dec 2024 18:43:39,846 INFO : 54% Done
07 Dec 2024 18:43:39,880 INFO : 55% Done
07 Dec 2024 18:43:39,903 INFO : 56% Done
07 Dec 2024 18:43:39,927 INFO : 57% Done
07 Dec 2024 18:43:39,953 INFO : 58% Done
07 Dec 2024 18:43:39,986 INFO : 59% Done
07 Dec 2024 18:43:40,012 INFO : 60% Done
07 Dec 2024 18:43:40,037 INFO : 61% Done
07 Dec 2024 18:43:40,064 INFO : 62% Done
07 Dec 2024 18:43:40,091 INFO : 63% Done
07 Dec 2024 18:43:40,115 INFO : 64% Done
07 Dec 2024 18:43:40,143 INFO : 65% Done
07 Dec 2024 18:43:40,173 INFO : 66% Done
07 Dec 2024 18:43:40,201 INFO : 67% Done
07 Dec 2024 18:43:40,230 INFO : 68% Done
07 Dec 2024 18:43:40,259 INFO : 69% Done
07 Dec 2024 18:43:40,286 INFO : 70% Done
07 Dec 2024 18:43:40,315 INFO : 71% Done
07 Dec 2024 18:43:40,343 INFO : 72% Done
07 Dec 2024 18:43:40,393 INFO : 73% Done
07 Dec 2024 18:43:40,426 INFO : 74% Done
07 Dec 2024 18:43:40,487 INFO : 75% Done
07 Dec 2024 18:43:40,512 INFO : 76% Done
07 Dec 2024 18:43:40,539 INFO : 77% Done
07 Dec 2024 18:43:40,568 INFO : 78% Done
07 Dec 2024 18:43:40,595 INFO : 79% Done
07 Dec 2024 18:43:40,619 INFO : 80% Done
07 Dec 2024 18:43:40,644 INFO : 81% Done
07 Dec 2024 18:43:40,673 INFO : 82% Done
07 Dec 2024 18:43:40,697 INFO : 83% Done
07 Dec 2024 18:43:40,728 INFO : 84% Done
07 Dec 2024 18:43:40,759 INFO : 85% Done
07 Dec 2024 18:43:40,787 INFO : 86% Done
07 Dec 2024 18:43:40,813 INFO : 87% Done
07 Dec 2024 18:43:40,839 INFO : 88% Done
07 Dec 2024 18:43:40,868 INFO : 89% Done
07 Dec 2024 18:43:40,890 INFO : 90% Done
07 Dec 2024 18:43:40,919 INFO : 91% Done
07 Dec 2024 18:43:40,948 INFO : 92% Done
07 Dec 2024 18:43:40,972 INFO : 93% Done
07 Dec 2024 18:43:41,001 INFO : 94% Done
07 Dec 2024 18:43:41,025 INFO : 95% Done
07 Dec 2024 18:43:41,053 INFO : 96% Done
07 Dec 2024 18:43:41,081 INFO : 97% Done
07 Dec 2024 18:43:41,113 INFO : 98% Done
07 Dec 2024 18:43:41,133 INFO : Done parsing Skyline document.
07 Dec 2024 18:43:41,133 INFO : Calculating iRT correlations for 4 sample(s)
07 Dec 2024 18:43:41,137 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:43:41,138 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:43:41,139 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:43:41,140 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:43:41,140 INFO : Finished calculating iRT correlations for all samples. 4 had a regression line calculated.
07 Dec 2024 18:43:41,206 INFO : Creating and populating temp tables for Proportion values
07 Dec 2024 18:43:41,220 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Dec 2024 18:43:41,300 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Dec 2024 18:43:41,346 INFO : Cleaning up temp tables
07 Dec 2024 18:43:41,607 INFO : Completed import of Skyline document from PXD002966_lc-BHZ_Plasma_2024-03-24_14-42-16.sky.zip
07 Dec 2024 18:43:41,609 INFO : 100% Done
07 Dec 2024 18:43:41,614 INFO : Starting import from ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip
07 Dec 2024 18:43:41,616 INFO : Starting to import Skyline document from ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip
07 Dec 2024 18:43:41,625 INFO : Expanding Human_210604_DnaK.protdb
07 Dec 2024 18:43:43,867 INFO : Expanding PXD023738_ARP-peptides.irtdb
07 Dec 2024 18:43:43,868 INFO : Expanding ARP-Serum_Enriched.imsdb
07 Dec 2024 18:43:43,870 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.blib
07 Dec 2024 18:43:44,198 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.redundant.blib
07 Dec 2024 18:43:48,048 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.blib
07 Dec 2024 18:43:48,591 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.redundant.blib
07 Dec 2024 18:43:55,043 INFO : Expanding ARP_Serum_clinical_enr_HD_DDA_Transfer_PrefList_C3H2N2O_1perc.blib
07 Dec 2024 18:43:55,257 INFO : Expanding ARP_Serum_clinical_enr_HD_DDA_Transfer_PrefList_C3H2N2O_1perc.redundant.blib
07 Dec 2024 18:43:58,485 INFO : Expanding PXD023738_PEAKS_5perc_PepLevel_reanalysis.blib
07 Dec 2024 18:43:58,615 INFO : Expanding PXD023738_PEAKS_5perc_PepLevel_reanalysis.redundant.blib
07 Dec 2024 18:43:59,463 INFO : Expanding ARP-Serum_RA_enriched_filtered.skyd
07 Dec 2024 18:44:06,467 INFO : Expanding ARP-Serum_RA_enriched_filtered.sky.view
07 Dec 2024 18:44:06,468 INFO : Expanding ARP-Serum_RA_enriched_filtered.sky
07 Dec 2024 18:44:06,653 INFO : Expanding ARP-Serum_RA_enriched_filtered.skyl
07 Dec 2024 18:44:06,856 INFO : Reading Skyline file, ARP-Serum_RA_enriched_filtered.sky, to determine if the TransitionChromInfos in the document should be stored...
07 Dec 2024 18:44:07,069 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
07 Dec 2024 18:44:07,070 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
07 Dec 2024 18:44:07,074 INFO : 1% Done
07 Dec 2024 18:44:11,405 INFO : Inserting iRT Peptides
07 Dec 2024 18:44:11,543 INFO : 2% Done
07 Dec 2024 18:44:11,920 INFO : 4% Done
07 Dec 2024 18:44:12,140 INFO : 5% Done
07 Dec 2024 18:44:12,441 INFO : 6% Done
07 Dec 2024 18:44:12,699 INFO : 7% Done
07 Dec 2024 18:44:12,858 INFO : Inserting sp|P01859|IGHG2_HUMAN
07 Dec 2024 18:44:12,883 INFO : 8% Done
07 Dec 2024 18:44:13,043 INFO : 9% Done
07 Dec 2024 18:44:13,229 INFO : Inserting sp|P99110|DNAK_STAAN
07 Dec 2024 18:44:13,264 INFO : 10% Done
07 Dec 2024 18:44:13,647 INFO : 11% Done
07 Dec 2024 18:44:13,910 INFO : 12% Done
07 Dec 2024 18:44:14,041 INFO : 13% Done
07 Dec 2024 18:44:14,173 INFO : 14% Done
07 Dec 2024 18:44:14,558 INFO : 15% Done
07 Dec 2024 18:44:14,727 INFO : 16% Done
07 Dec 2024 18:44:14,945 INFO : 17% Done
07 Dec 2024 18:44:15,082 INFO : 18% Done
07 Dec 2024 18:44:15,479 INFO : 19% Done
07 Dec 2024 18:44:15,606 INFO : 20% Done
07 Dec 2024 18:44:15,866 INFO : 21% Done
07 Dec 2024 18:44:16,000 INFO : 22% Done
07 Dec 2024 18:44:16,393 INFO : 23% Done
07 Dec 2024 18:44:16,526 INFO : 24% Done
07 Dec 2024 18:44:16,797 INFO : 25% Done
07 Dec 2024 18:44:16,896 INFO : Inserting sp|Q14624|ITIH4_HUMAN
07 Dec 2024 18:44:16,913 INFO : 26% Done
07 Dec 2024 18:44:16,989 INFO : Inserting sp|P02652|APOA2_HUMAN
07 Dec 2024 18:44:17,104 INFO : Inserting sp|B9A064|IGLL5_HUMAN
07 Dec 2024 18:44:17,325 INFO : Inserting sp|P0CG04|IGLC1_HUMAN
07 Dec 2024 18:44:17,382 INFO : 28% Done
07 Dec 2024 18:44:17,550 INFO : Inserting sp|P0DOY3|IGLC3_HUMAN
07 Dec 2024 18:44:17,615 INFO : 29% Done
07 Dec 2024 18:44:17,787 INFO : Inserting sp|P04196|HRG_HUMAN
07 Dec 2024 18:44:17,893 INFO : Inserting sp|P02787|TRFE_HUMAN
07 Dec 2024 18:44:17,932 INFO : 30% Done
07 Dec 2024 18:44:18,031 INFO : Inserting sp|P02768|ALBU_HUMAN
07 Dec 2024 18:44:18,188 INFO : 31% Done
07 Dec 2024 18:44:18,435 INFO : 32% Done
07 Dec 2024 18:44:18,573 INFO : 33% Done
07 Dec 2024 18:44:18,962 INFO : 34% Done
07 Dec 2024 18:44:19,395 INFO : 35% Done
07 Dec 2024 18:44:19,519 INFO : 36% Done
07 Dec 2024 18:44:19,772 INFO : 37% Done
07 Dec 2024 18:44:20,017 INFO : 38% Done
07 Dec 2024 18:44:20,305 INFO : 39% Done
07 Dec 2024 18:44:20,550 INFO : 40% Done
07 Dec 2024 18:44:20,670 INFO : 41% Done
07 Dec 2024 18:44:20,910 INFO : 42% Done
07 Dec 2024 18:44:21,286 INFO : 43% Done
07 Dec 2024 18:44:21,416 INFO : 44% Done
07 Dec 2024 18:44:21,573 INFO : 45% Done
07 Dec 2024 18:44:21,766 INFO : 46% Done
07 Dec 2024 18:44:22,168 INFO : 47% Done
07 Dec 2024 18:44:22,278 INFO : 48% Done
07 Dec 2024 18:44:22,416 INFO : 49% Done
07 Dec 2024 18:44:22,683 INFO : 50% Done
07 Dec 2024 18:44:22,960 INFO : 51% Done
07 Dec 2024 18:44:23,243 INFO : 52% Done
07 Dec 2024 18:44:23,387 INFO : 53% Done
07 Dec 2024 18:44:23,575 INFO : 54% Done
07 Dec 2024 18:44:23,930 INFO : 55% Done
07 Dec 2024 18:44:24,190 INFO : 56% Done
07 Dec 2024 18:44:24,360 INFO : 57% Done
07 Dec 2024 18:44:24,500 INFO : 58% Done
07 Dec 2024 18:44:24,899 INFO : 59% Done
07 Dec 2024 18:44:25,010 INFO : 60% Done
07 Dec 2024 18:44:25,238 INFO : 61% Done
07 Dec 2024 18:44:25,374 INFO : 62% Done
07 Dec 2024 18:44:25,750 INFO : 63% Done
07 Dec 2024 18:44:25,994 INFO : 64% Done
07 Dec 2024 18:44:26,132 INFO : 65% Done
07 Dec 2024 18:44:26,314 INFO : 66% Done
07 Dec 2024 18:44:26,678 INFO : 67% Done
07 Dec 2024 18:44:26,951 INFO : 69% Done
07 Dec 2024 18:44:27,272 INFO : 70% Done
07 Dec 2024 18:44:27,650 INFO : 72% Done
07 Dec 2024 18:44:27,967 INFO : 73% Done
07 Dec 2024 18:44:28,095 INFO : 74% Done
07 Dec 2024 18:44:28,485 INFO : 75% Done
07 Dec 2024 18:44:28,657 INFO : 76% Done
07 Dec 2024 18:44:28,854 INFO : 77% Done
07 Dec 2024 18:44:29,050 INFO : 78% Done
07 Dec 2024 18:44:29,257 INFO : Inserting sp|Q66K66|TM198_HUMAN
07 Dec 2024 18:44:29,382 INFO : Inserting sp|P02647|APOA1_HUMAN
07 Dec 2024 18:44:29,409 INFO : 79% Done
07 Dec 2024 18:44:29,615 INFO : Inserting Denovo peptides
07 Dec 2024 18:44:29,645 INFO : 80% Done
07 Dec 2024 18:44:29,742 INFO : Done parsing Skyline document.
07 Dec 2024 18:44:29,742 INFO : Calculating iRT correlations for 155 sample(s)
07 Dec 2024 18:44:29,745 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,745 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,746 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,746 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,746 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,747 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,747 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,747 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,747 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,748 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,748 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,748 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,749 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,749 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,749 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,750 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,750 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,750 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,750 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,751 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,751 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,751 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,752 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,752 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,752 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,752 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,753 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,753 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,753 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,754 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,754 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,754 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,754 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,755 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,755 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,755 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,756 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,756 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,756 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,756 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,757 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,757 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,757 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,758 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,758 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,758 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,758 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,759 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,759 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,759 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,760 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,760 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,760 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,760 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,761 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,761 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,761 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,761 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,762 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,762 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,762 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,763 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,763 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,763 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,763 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,764 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,764 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,764 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,765 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,765 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,765 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,765 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,766 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,766 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,766 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,767 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,767 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,767 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,767 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,768 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,768 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,768 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,768 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,769 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,769 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,769 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,770 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,770 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,770 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,770 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,771 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,771 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,771 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,772 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,772 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,772 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,772 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,773 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,773 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,773 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,773 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,774 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,774 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,774 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,775 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,775 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,775 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,775 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,776 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,776 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,776 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,777 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,777 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,777 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,777 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,778 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,778 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,778 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,778 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,779 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,779 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,779 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,780 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,780 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,780 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,780 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,781 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,781 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,781 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,782 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,782 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,782 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,782 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,783 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,783 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,783 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,784 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,784 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,784 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,784 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,785 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,785 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,785 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,785 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,786 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,786 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,786 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,787 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,787 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,787 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,787 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,788 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,788 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,788 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,788 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:44:29,789 INFO : Finished calculating iRT correlations for all samples. 155 had a regression line calculated.
07 Dec 2024 18:44:29,845 INFO : Calculating fold changes
07 Dec 2024 18:44:32,800 INFO : 98% Done
07 Dec 2024 18:44:32,800 INFO : Done calculating fold changes.
07 Dec 2024 18:55:22,401 INFO : Creating and populating temp tables for Proportion values
07 Dec 2024 18:55:22,442 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Dec 2024 18:55:23,014 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Dec 2024 18:55:23,466 INFO : Cleaning up temp tables
07 Dec 2024 18:55:23,688 INFO : Completed import of Skyline document from ARP-Serum_RA_enriched_filtered_2024-11-30_20-01-07.sky.zip
07 Dec 2024 18:55:23,691 INFO : 100% Done
07 Dec 2024 18:55:23,698 INFO : Starting import from ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip
07 Dec 2024 18:55:23,699 INFO : Starting to import Skyline document from ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip
07 Dec 2024 18:55:23,732 INFO : Expanding Human_210604_DnaK.protdb
07 Dec 2024 18:55:25,990 INFO : Expanding DnaK.irtdb
07 Dec 2024 18:55:25,993 INFO : Expanding RA_ARP-Serum_NonEnriched_transfer_filtered.imsdb
07 Dec 2024 18:55:25,993 INFO : Expanding ARP_Serum_RA_NonEnriched_Transfer_PEAKS_PTM_AGES_1perc.blib
07 Dec 2024 18:55:26,079 INFO : Expanding ARP_Serum_RA_NonEnriched_Transfer_PEAKS_PTM_AGES_1perc.redundant.blib
07 Dec 2024 18:55:26,600 INFO : Expanding ARP_Serum_RA_NonEnriched_Trap_PEAKS_PTM_AGES_1perc.blib
07 Dec 2024 18:55:26,731 INFO : Expanding ARP_Serum_RA_NonEnriched_Trap_PEAKS_PTM_AGES_1perc.redundant.blib
07 Dec 2024 18:55:27,473 INFO : Expanding Synapt_NonEnriched_clinical_set_prosit.blib
07 Dec 2024 18:55:27,476 INFO : Expanding ARP-Serum_RA_NonEnriched_clinical_filtered.skyd
07 Dec 2024 18:56:09,325 INFO : Expanding ARP-Serum_RA_NonEnriched_clinical_filtered.sky.view
07 Dec 2024 18:56:09,326 INFO : Expanding ARP-Serum_RA_NonEnriched_clinical_filtered.sky
07 Dec 2024 18:56:09,708 INFO : Expanding ARP-Serum_RA_NonEnriched_clinical_filtered.skyl
07 Dec 2024 18:56:09,739 INFO : Reading Skyline file, ARP-Serum_RA_NonEnriched_clinical_filtered.sky, to determine if the TransitionChromInfos in the document should be stored...
07 Dec 2024 18:56:10,120 INFO : TransitionChromInfo counts or precursor counts are within the allowed limits. TransitionChromInfos will be stored
07 Dec 2024 18:56:10,121 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
07 Dec 2024 18:56:24,363 INFO : Inserting DnaK_iRT_peptides
07 Dec 2024 18:56:24,499 INFO : 1% Done
07 Dec 2024 18:56:25,003 INFO : 2% Done
07 Dec 2024 18:56:26,013 INFO : 3% Done
07 Dec 2024 18:56:26,419 INFO : 4% Done
07 Dec 2024 18:56:26,602 INFO : Inserting sp|P01834|IGKC_HUMAN
07 Dec 2024 18:56:26,948 INFO : 5% Done
07 Dec 2024 18:56:27,574 INFO : 6% Done
07 Dec 2024 18:56:28,568 INFO : Inserting sp|P01859|IGHG2_HUMAN
07 Dec 2024 18:56:28,596 INFO : 7% Done
07 Dec 2024 18:56:29,127 INFO : 8% Done
07 Dec 2024 18:56:29,687 INFO : 9% Done
07 Dec 2024 18:56:30,291 INFO : 10% Done
07 Dec 2024 18:56:30,989 INFO : Inserting sp|P01860|IGHG3_HUMAN
07 Dec 2024 18:56:31,331 INFO : 11% Done
07 Dec 2024 18:56:31,883 INFO : 12% Done
07 Dec 2024 18:56:32,131 INFO : Inserting sp|P02647|APOA1_HUMAN
07 Dec 2024 18:56:32,352 INFO : 13% Done
07 Dec 2024 18:56:32,949 INFO : 14% Done
07 Dec 2024 18:56:33,867 INFO : 15% Done
07 Dec 2024 18:56:34,504 INFO : 16% Done
07 Dec 2024 18:56:35,000 INFO : 17% Done
07 Dec 2024 18:56:35,078 INFO : Inserting sp|P02652|APOA2_HUMAN
07 Dec 2024 18:56:35,442 INFO : 18% Done
07 Dec 2024 18:56:35,696 INFO : Inserting sp|P02768|ALBU_HUMAN
07 Dec 2024 18:56:36,611 INFO : 19% Done
07 Dec 2024 18:56:37,137 INFO : 20% Done
07 Dec 2024 18:56:37,744 INFO : 21% Done
07 Dec 2024 18:56:38,214 INFO : 22% Done
07 Dec 2024 18:56:39,377 INFO : 23% Done
07 Dec 2024 18:56:39,910 INFO : 24% Done
07 Dec 2024 18:56:40,509 INFO : 25% Done
07 Dec 2024 18:56:41,055 INFO : 26% Done
07 Dec 2024 18:56:42,116 INFO : 27% Done
07 Dec 2024 18:56:42,668 INFO : 28% Done
07 Dec 2024 18:56:43,178 INFO : 29% Done
07 Dec 2024 18:56:43,667 INFO : 30% Done
07 Dec 2024 18:56:44,756 INFO : 31% Done
07 Dec 2024 18:56:45,364 INFO : 32% Done
07 Dec 2024 18:56:45,873 INFO : 33% Done
07 Dec 2024 18:56:46,492 INFO : 34% Done
07 Dec 2024 18:56:47,517 INFO : 35% Done
07 Dec 2024 18:56:48,007 INFO : 36% Done
07 Dec 2024 18:56:48,606 INFO : 37% Done
07 Dec 2024 18:56:49,129 INFO : 38% Done
07 Dec 2024 18:56:50,158 INFO : 39% Done
07 Dec 2024 18:56:50,644 INFO : 40% Done
07 Dec 2024 18:56:51,143 INFO : 41% Done
07 Dec 2024 18:56:51,737 INFO : 42% Done
07 Dec 2024 18:56:52,849 INFO : 43% Done
07 Dec 2024 18:56:53,371 INFO : 44% Done
07 Dec 2024 18:56:53,889 INFO : 45% Done
07 Dec 2024 18:56:54,434 INFO : 46% Done
07 Dec 2024 18:56:55,498 INFO : 47% Done
07 Dec 2024 18:56:56,004 INFO : 48% Done
07 Dec 2024 18:56:56,546 INFO : 49% Done
07 Dec 2024 18:56:56,989 INFO : 50% Done
07 Dec 2024 18:56:58,247 INFO : 51% Done
07 Dec 2024 18:56:58,695 INFO : Inserting sp|P02745|C1QA_HUMAN
07 Dec 2024 18:56:58,723 INFO : 52% Done
07 Dec 2024 18:56:58,794 INFO : Inserting sp|P04196|HRG_HUMAN
07 Dec 2024 18:56:59,053 INFO : Inserting sp|B9A064|IGLL5_HUMAN
07 Dec 2024 18:56:59,299 INFO : 53% Done
07 Dec 2024 18:56:59,431 INFO : Inserting sp|P00450|CERU_HUMAN
07 Dec 2024 18:56:59,754 INFO : 54% Done
07 Dec 2024 18:57:00,808 INFO : 55% Done
07 Dec 2024 18:57:00,866 INFO : Inserting sp|P01009|A1AT_HUMAN
07 Dec 2024 18:57:01,324 INFO : 56% Done
07 Dec 2024 18:57:01,828 INFO : 57% Done
07 Dec 2024 18:57:02,447 INFO : 58% Done
07 Dec 2024 18:57:03,368 INFO : 59% Done
07 Dec 2024 18:57:03,720 INFO : Inserting sp|P01042|KNG1_HUMAN
07 Dec 2024 18:57:03,941 INFO : 60% Done
07 Dec 2024 18:57:04,225 INFO : Inserting sp|P01871|IGHM_HUMAN
07 Dec 2024 18:57:04,462 INFO : 61% Done
07 Dec 2024 18:57:04,942 INFO : 62% Done
07 Dec 2024 18:57:05,933 INFO : Inserting sp|P02749|APOH_HUMAN
07 Dec 2024 18:57:06,065 INFO : 63% Done
07 Dec 2024 18:57:06,451 INFO : Inserting sp|P02766|TTHY_HUMAN
07 Dec 2024 18:57:06,576 INFO : 64% Done
07 Dec 2024 18:57:07,040 INFO : 65% Done
07 Dec 2024 18:57:07,303 INFO : Inserting sp|P02774|VTDB_HUMAN
07 Dec 2024 18:57:07,607 INFO : 66% Done
07 Dec 2024 18:57:08,273 INFO : Inserting sp|Q14624|ITIH4_HUMAN
07 Dec 2024 18:57:08,664 INFO : 67% Done
07 Dec 2024 18:57:09,048 INFO : Inserting sp|P02787|TRFE_HUMAN
07 Dec 2024 18:57:09,107 INFO : 68% Done
07 Dec 2024 18:57:09,687 INFO : 69% Done
07 Dec 2024 18:57:10,213 INFO : 70% Done
07 Dec 2024 18:57:11,317 INFO : 71% Done
07 Dec 2024 18:57:11,810 INFO : 72% Done
07 Dec 2024 18:57:12,307 INFO : 73% Done
07 Dec 2024 18:57:12,929 INFO : 74% Done
07 Dec 2024 18:57:13,832 INFO : Inserting sp|P0CF74|IGLC6_HUMAN
07 Dec 2024 18:57:13,891 INFO : 75% Done
07 Dec 2024 18:57:14,497 INFO : 76% Done
07 Dec 2024 18:57:14,626 INFO : Inserting sp|P0DOY3|IGLC3_HUMAN
07 Dec 2024 18:57:14,730 INFO : Inserting sp|P99110|DNAK_STAAN
07 Dec 2024 18:57:15,037 INFO : 77% Done
07 Dec 2024 18:57:15,505 INFO : 78% Done
07 Dec 2024 18:57:16,570 INFO : 79% Done
07 Dec 2024 18:57:17,076 INFO : 80% Done
07 Dec 2024 18:57:17,356 INFO : Done parsing Skyline document.
07 Dec 2024 18:57:17,356 INFO : Calculating iRT correlations for 102 sample(s)
07 Dec 2024 18:57:17,361 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,362 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,363 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,364 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,364 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,365 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,365 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,366 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,367 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,367 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,368 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,368 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,369 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,370 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,370 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,371 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,371 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,372 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,373 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,373 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,374 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,374 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,375 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,375 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,376 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,377 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,377 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,378 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,378 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,379 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,379 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,380 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,381 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,381 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,382 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,382 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,383 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,383 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,384 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,384 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,385 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,385 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,386 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,387 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,387 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,388 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,388 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,389 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,389 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,390 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,391 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,391 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,392 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,392 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,393 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,393 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,394 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,394 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,395 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,396 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,396 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,397 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,397 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,398 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,399 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,399 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,400 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,400 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,401 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,401 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,402 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,403 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,403 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,404 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,404 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,405 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,405 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,406 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,406 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,407 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,407 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,408 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,409 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,409 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,410 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,410 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,411 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,411 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,412 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,412 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,413 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,413 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,414 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,415 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,415 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,416 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,416 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,417 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,417 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,418 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,418 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,419 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:57:17,419 INFO : Finished calculating iRT correlations for all samples. 102 had a regression line calculated.
07 Dec 2024 18:57:17,474 INFO : No group comparisons found.
07 Dec 2024 18:57:17,474 INFO : Calculating calibration curves
07 Dec 2024 18:57:17,967 INFO : 81% Done
07 Dec 2024 18:57:18,298 INFO : 82% Done
07 Dec 2024 18:57:18,714 INFO : 83% Done
07 Dec 2024 18:57:19,411 INFO : 84% Done
07 Dec 2024 18:57:19,515 INFO : 85% Done
07 Dec 2024 18:57:23,527 INFO : 86% Done
07 Dec 2024 18:57:23,590 INFO : 87% Done
07 Dec 2024 18:57:23,656 INFO : 88% Done
07 Dec 2024 18:57:23,901 INFO : 89% Done
07 Dec 2024 18:57:24,419 INFO : 90% Done
07 Dec 2024 18:57:24,505 INFO : 91% Done
07 Dec 2024 18:57:24,796 INFO : 92% Done
07 Dec 2024 18:57:25,033 INFO : 93% Done
07 Dec 2024 18:57:25,204 INFO : 94% Done
07 Dec 2024 18:57:25,339 INFO : 95% Done
07 Dec 2024 18:57:26,284 INFO : 96% Done
07 Dec 2024 18:57:26,303 INFO : 97% Done
07 Dec 2024 18:57:26,758 INFO : 98% Done
07 Dec 2024 18:57:26,797 INFO : Done calculating calibration curves.
07 Dec 2024 18:57:44,052 INFO : Creating and populating temp tables for Proportion values
07 Dec 2024 18:57:44,143 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Dec 2024 18:57:45,534 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Dec 2024 18:57:46,407 INFO : Cleaning up temp tables
07 Dec 2024 18:57:46,638 INFO : Completed import of Skyline document from ARP-Serum_RA_NonEnriched_clinical_filtered_2024-11-30_20-30-58.sky.zip
07 Dec 2024 18:57:46,640 INFO : 100% Done
07 Dec 2024 18:57:46,648 INFO : Starting import from ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip
07 Dec 2024 18:57:46,649 INFO : Starting to import Skyline document from ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip
07 Dec 2024 18:57:46,682 INFO : Expanding Human_210604_DnaK.protdb
07 Dec 2024 18:57:48,902 INFO : Expanding PXD023738_ARP-peptides.irtdb
07 Dec 2024 18:57:48,903 INFO : Expanding ARP-Serum_Enriched.imsdb
07 Dec 2024 18:57:48,905 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.blib
07 Dec 2024 18:57:49,235 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Transfer_strict_1perc.redundant.blib
07 Dec 2024 18:57:52,996 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.blib
07 Dec 2024 18:57:53,518 INFO : Expanding ARP_Serum_RA_enr_HD_DDA_Trap_strict_1perc.redundant.blib
07 Dec 2024 18:57:59,608 INFO : Expanding PXD023738_PEAKS_5perc_PepLevel_reanalysis.blib
07 Dec 2024 18:57:59,714 INFO : Expanding PXD023738_PEAKS_5perc_PepLevel_reanalysis.redundant.blib
07 Dec 2024 18:58:00,561 INFO : Expanding ARP-Serum_RA_enriched_DDA_preFiltering.skyd
07 Dec 2024 18:58:47,687 INFO : Expanding ARP-Serum_RA_enriched_DDA_preFiltering.sky.view
07 Dec 2024 18:58:47,689 INFO : Expanding ARP-Serum_RA_enriched_DDA_preFiltering.sky
07 Dec 2024 18:58:48,327 INFO : Expanding ARP-Serum_RA_enriched_DDA_preFiltering.skyl
07 Dec 2024 18:58:48,517 INFO : Reading Skyline file, ARP-Serum_RA_enriched_DDA_preFiltering.sky, to determine if the TransitionChromInfos in the document should be stored...
07 Dec 2024 18:58:48,990 INFO : TransitionChromInfos in the document exceed the limit of 100000, and there are more than 1000 precursors. TransitionChromInfos will not be stored.
07 Dec 2024 18:58:48,991 WARN : The version of this Skyline document is 24.11. This is newer than the highest supported version 23.1
07 Dec 2024 18:59:01,773 INFO : Inserting iRT Peptides
07 Dec 2024 18:59:01,860 INFO : 1% Done
07 Dec 2024 18:59:02,080 INFO : Inserting sp|P01859|IGHG2_HUMAN
07 Dec 2024 18:59:02,185 INFO : 2% Done
07 Dec 2024 18:59:02,884 INFO : 3% Done
07 Dec 2024 18:59:03,253 INFO : 4% Done
07 Dec 2024 18:59:03,345 INFO : Inserting sp|P99110|DNAK_STAAN
07 Dec 2024 18:59:03,606 INFO : 5% Done
07 Dec 2024 18:59:03,931 INFO : 6% Done
07 Dec 2024 18:59:04,617 INFO : 7% Done
07 Dec 2024 18:59:04,947 INFO : 8% Done
07 Dec 2024 18:59:05,304 INFO : 9% Done
07 Dec 2024 18:59:05,361 INFO : Inserting sp|A0A075B6K0|LV316_HUMAN
07 Dec 2024 18:59:05,425 INFO : Inserting sp|P01715|LV301_HUMAN
07 Dec 2024 18:59:05,489 INFO : Inserting sp|P01718|LV327_HUMAN
07 Dec 2024 18:59:05,644 INFO : Inserting sp|Q8N1N4|K2C78_HUMAN
07 Dec 2024 18:59:05,681 INFO : Inserting sp|A0A075B6H7|KV37_HUMAN
07 Dec 2024 18:59:05,746 INFO : Inserting sp|A0A075B6K2|LV312_HUMAN
07 Dec 2024 18:59:05,761 INFO : 10% Done
07 Dec 2024 18:59:05,810 INFO : Inserting sp|A0A075B6K4|LV310_HUMAN
07 Dec 2024 18:59:05,875 INFO : Inserting sp|A0A075B6K5|LV39_HUMAN
07 Dec 2024 18:59:05,938 INFO : Inserting sp|A0A087WSY6|KVD15_HUMAN
07 Dec 2024 18:59:06,003 INFO : Inserting sp|A0A0A0MRZ8|KVD11_HUMAN
07 Dec 2024 18:59:06,066 INFO : Inserting sp|A0A0C4DH38|HV551_HUMAN
07 Dec 2024 18:59:06,130 INFO : Inserting sp|A0A0C4DH55|KVD07_HUMAN
07 Dec 2024 18:59:06,193 INFO : Inserting sp|A0A0C4DH72|KV106_HUMAN
07 Dec 2024 18:59:06,230 INFO : Inserting sp|A0A0C4DH73|KV112_HUMAN
07 Dec 2024 18:59:06,266 INFO : Inserting sp|A0A0G2JMI3|HV692_HUMAN
07 Dec 2024 18:59:06,328 INFO : Inserting sp|A0A0J9YXX1|HV5X1_HUMAN
07 Dec 2024 18:59:06,387 INFO : Inserting sp|A0M8Q6|IGLC7_HUMAN
07 Dec 2024 18:59:06,420 INFO : Inserting sp|P00450|CERU_HUMAN
07 Dec 2024 18:59:06,452 INFO : Inserting sp|P00738|HPT_HUMAN
07 Dec 2024 18:59:06,465 INFO : 11% Done
07 Dec 2024 18:59:06,798 INFO : 12% Done
07 Dec 2024 18:59:07,121 INFO : 13% Done
07 Dec 2024 18:59:07,140 INFO : Inserting sp|P00739|HPTR_HUMAN
07 Dec 2024 18:59:07,375 INFO : Inserting sp|P01008|ANT3_HUMAN
07 Dec 2024 18:59:07,418 INFO : 14% Done
07 Dec 2024 18:59:07,437 INFO : Inserting sp|P01009|A1AT_HUMAN
07 Dec 2024 18:59:07,989 INFO : Inserting sp|P01011|AACT_HUMAN
07 Dec 2024 18:59:08,072 INFO : 15% Done
07 Dec 2024 18:59:08,090 INFO : Inserting sp|P01023|A2MG_HUMAN
07 Dec 2024 18:59:08,401 INFO : Inserting sp|P01024|CO3_HUMAN
07 Dec 2024 18:59:08,414 INFO : 16% Done
07 Dec 2024 18:59:08,715 INFO : 17% Done
07 Dec 2024 18:59:08,878 INFO : Inserting sp|P01042|KNG1_HUMAN
07 Dec 2024 18:59:08,944 INFO : Inserting sp|P01601|KVD16_HUMAN
07 Dec 2024 18:59:09,011 INFO : Inserting sp|P01611|KVD12_HUMAN
07 Dec 2024 18:59:09,045 INFO : Inserting sp|P01619|KV320_HUMAN
07 Dec 2024 18:59:09,088 INFO : 18% Done
07 Dec 2024 18:59:09,106 INFO : Inserting sp|P01624|KV315_HUMAN
07 Dec 2024 18:59:09,165 INFO : Inserting sp|P01717|LV325_HUMAN
07 Dec 2024 18:59:09,225 INFO : Inserting sp|P01834|IGKC_HUMAN
07 Dec 2024 18:59:09,751 INFO : Inserting sp|P01857|IGHG1_HUMAN
07 Dec 2024 18:59:09,779 INFO : 19% Done
07 Dec 2024 18:59:10,094 INFO : 20% Done
07 Dec 2024 18:59:10,491 INFO : 21% Done
07 Dec 2024 18:59:10,828 INFO : 22% Done
07 Dec 2024 18:59:11,248 INFO : Inserting sp|P01860|IGHG3_HUMAN
07 Dec 2024 18:59:11,536 INFO : 23% Done
07 Dec 2024 18:59:11,900 INFO : 24% Done
07 Dec 2024 18:59:12,010 INFO : Inserting sp|P01861|IGHG4_HUMAN
07 Dec 2024 18:59:12,207 INFO : 25% Done
07 Dec 2024 18:59:12,578 INFO : 26% Done
07 Dec 2024 18:59:12,915 INFO : Inserting sp|P01871|IGHM_HUMAN
07 Dec 2024 18:59:13,098 INFO : Inserting sp|P01876|IGHA1_HUMAN
07 Dec 2024 18:59:13,257 INFO : Inserting sp|P01877|IGHA2_HUMAN
07 Dec 2024 18:59:13,274 INFO : 27% Done
07 Dec 2024 18:59:13,384 INFO : Inserting sp|P02654|APOC1_HUMAN
07 Dec 2024 18:59:13,417 INFO : Inserting sp|P02656|APOC3_HUMAN
07 Dec 2024 18:59:13,477 INFO : Inserting sp|P02749|APOH_HUMAN
07 Dec 2024 18:59:13,545 INFO : Inserting sp|P02763|A1AG1_HUMAN
07 Dec 2024 18:59:13,642 INFO : Inserting sp|P02765|FETUA_HUMAN
07 Dec 2024 18:59:13,668 INFO : 28% Done
07 Dec 2024 18:59:13,728 INFO : Inserting sp|P02790|HEMO_HUMAN
07 Dec 2024 18:59:13,860 INFO : Inserting sp|P04114|APOB_HUMAN
07 Dec 2024 18:59:13,953 INFO : Inserting sp|P04217|A1BG_HUMAN
07 Dec 2024 18:59:13,997 INFO : 29% Done
07 Dec 2024 18:59:14,071 INFO : Inserting sp|P04264|K2C1_HUMAN
07 Dec 2024 18:59:14,104 INFO : Inserting sp|P04432|KVD39_HUMAN
07 Dec 2024 18:59:14,139 INFO : Inserting sp|P04433|KV311_HUMAN
07 Dec 2024 18:59:14,199 INFO : Inserting sp|P05546|HEP2_HUMAN
07 Dec 2024 18:59:14,231 INFO : Inserting sp|P06727|APOA4_HUMAN
07 Dec 2024 18:59:14,264 INFO : Inserting sp|P08603|CFAH_HUMAN
07 Dec 2024 18:59:14,368 INFO : 30% Done
07 Dec 2024 18:59:14,416 INFO : Inserting sp|P08697|A2AP_HUMAN
07 Dec 2024 18:59:14,489 INFO : Inserting sp|P0C0L4|CO4A_HUMAN
07 Dec 2024 18:59:14,615 INFO : Inserting sp|P0C0L5|CO4B_HUMAN
07 Dec 2024 18:59:14,754 INFO : Inserting sp|P0CF74|IGLC6_HUMAN
07 Dec 2024 18:59:15,149 INFO : 31% Done
07 Dec 2024 18:59:15,255 INFO : Inserting sp|P0DOY2|IGLC2_HUMAN
07 Dec 2024 18:59:15,515 INFO : 32% Done
07 Dec 2024 18:59:15,577 INFO : Inserting sp|P19652|A1AG2_HUMAN
07 Dec 2024 18:59:15,648 INFO : Inserting sp|P19827|ITIH1_HUMAN
07 Dec 2024 18:59:15,689 INFO : Inserting sp|P20742|PZP_HUMAN
07 Dec 2024 18:59:15,724 INFO : Inserting sp|P20848|A1ATR_HUMAN
07 Dec 2024 18:59:15,855 INFO : 33% Done
07 Dec 2024 18:59:15,931 INFO : Inserting sp|P27169|PON1_HUMAN
07 Dec 2024 18:59:15,989 INFO : Inserting sp|P35908|K22E_HUMAN
07 Dec 2024 18:59:16,091 INFO : Inserting sp|P69905|HBA_HUMAN
07 Dec 2024 18:59:16,125 INFO : Inserting sp|P80748|LV321_HUMAN
07 Dec 2024 18:59:16,186 INFO : Inserting sp|Q14624|ITIH4_HUMAN
07 Dec 2024 18:59:16,231 INFO : 34% Done
07 Dec 2024 18:59:16,335 INFO : Inserting sp|P02652|APOA2_HUMAN
07 Dec 2024 18:59:16,504 INFO : Inserting sp|B9A064|IGLL5_HUMAN
07 Dec 2024 18:59:16,792 INFO : Inserting sp|P0CG04|IGLC1_HUMAN
07 Dec 2024 18:59:16,850 INFO : 35% Done
07 Dec 2024 18:59:17,083 INFO : Inserting sp|P0DOY3|IGLC3_HUMAN
07 Dec 2024 18:59:17,171 INFO : 36% Done
07 Dec 2024 18:59:17,352 INFO : Inserting sp|P04196|HRG_HUMAN
07 Dec 2024 18:59:17,354 INFO : Inserting sp|P02787|TRFE_HUMAN
07 Dec 2024 18:59:17,516 INFO : 37% Done
07 Dec 2024 18:59:17,885 INFO : 38% Done
07 Dec 2024 18:59:18,649 INFO : 39% Done
07 Dec 2024 18:59:18,668 INFO : Inserting sp|P02768|ALBU_HUMAN
07 Dec 2024 18:59:19,006 INFO : 40% Done
07 Dec 2024 18:59:19,323 INFO : 41% Done
07 Dec 2024 18:59:19,706 INFO : 42% Done
07 Dec 2024 18:59:20,427 INFO : 43% Done
07 Dec 2024 18:59:20,752 INFO : 44% Done
07 Dec 2024 18:59:21,071 INFO : 45% Done
07 Dec 2024 18:59:21,405 INFO : 46% Done
07 Dec 2024 18:59:22,148 INFO : 47% Done
07 Dec 2024 18:59:22,530 INFO : 48% Done
07 Dec 2024 18:59:22,887 INFO : 49% Done
07 Dec 2024 18:59:23,215 INFO : 50% Done
07 Dec 2024 18:59:23,967 INFO : 51% Done
07 Dec 2024 18:59:24,313 INFO : 52% Done
07 Dec 2024 18:59:24,655 INFO : 53% Done
07 Dec 2024 18:59:25,002 INFO : 54% Done
07 Dec 2024 18:59:25,790 INFO : 55% Done
07 Dec 2024 18:59:26,088 INFO : 56% Done
07 Dec 2024 18:59:26,422 INFO : 57% Done
07 Dec 2024 18:59:26,750 INFO : 58% Done
07 Dec 2024 18:59:27,494 INFO : 59% Done
07 Dec 2024 18:59:27,849 INFO : 60% Done
07 Dec 2024 18:59:28,224 INFO : 61% Done
07 Dec 2024 18:59:28,589 INFO : 62% Done
07 Dec 2024 18:59:29,312 INFO : 63% Done
07 Dec 2024 18:59:29,623 INFO : 64% Done
07 Dec 2024 18:59:29,958 INFO : 65% Done
07 Dec 2024 18:59:30,353 INFO : 66% Done
07 Dec 2024 18:59:31,096 INFO : 67% Done
07 Dec 2024 18:59:31,439 INFO : 68% Done
07 Dec 2024 18:59:31,752 INFO : 69% Done
07 Dec 2024 18:59:32,065 INFO : 70% Done
07 Dec 2024 18:59:32,806 INFO : 71% Done
07 Dec 2024 18:59:33,152 INFO : 72% Done
07 Dec 2024 18:59:33,509 INFO : 73% Done
07 Dec 2024 18:59:33,837 INFO : 74% Done
07 Dec 2024 18:59:34,466 INFO : 75% Done
07 Dec 2024 18:59:34,782 INFO : 76% Done
07 Dec 2024 18:59:35,087 INFO : 77% Done
07 Dec 2024 18:59:35,424 INFO : 78% Done
07 Dec 2024 18:59:35,615 INFO : Inserting sp|Q66K66|TM198_HUMAN
07 Dec 2024 18:59:35,648 INFO : Inserting sp|P02647|APOA1_HUMAN
07 Dec 2024 18:59:36,074 INFO : 79% Done
07 Dec 2024 18:59:36,439 INFO : 80% Done
07 Dec 2024 18:59:36,573 INFO : Inserting Denovo peptides
07 Dec 2024 18:59:36,604 INFO : None of the 493065 TransitionChromInfos in the file were imported because they exceed the limit of 100000 and there are more than 1000 precursors
07 Dec 2024 18:59:36,604 INFO : Done parsing Skyline document.
07 Dec 2024 18:59:36,604 INFO : Calculating iRT correlations for 87 sample(s)
07 Dec 2024 18:59:36,609 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,610 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,611 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,612 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,613 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,614 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,615 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,616 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,618 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,619 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,620 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,621 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,622 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,623 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,624 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,625 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,626 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,627 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,628 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,629 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,630 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,631 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,632 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,633 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,634 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,635 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,636 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,637 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,638 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,639 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,640 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,641 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,642 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,643 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,644 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,645 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,646 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,647 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,648 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,649 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,650 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,651 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,652 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,653 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,654 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,655 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,656 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,657 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,659 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,660 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,661 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,662 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,663 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,664 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,665 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,665 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,667 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,668 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,669 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,670 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,671 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,672 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,673 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,674 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,675 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,676 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,677 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,678 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,679 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,680 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,681 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,682 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,683 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,684 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,685 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,686 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,687 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,688 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,689 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,690 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,691 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,692 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,693 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,694 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,695 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,696 INFO : Calculated iRT regression line from full standard list.
07 Dec 2024 18:59:36,697 INFO : Calculated iRT regression line by ignoring import value for standard: K[+367.131425]QTALVELVK
07 Dec 2024 18:59:36,697 INFO : Finished calculating iRT correlations for all samples. 87 had a regression line calculated.
07 Dec 2024 18:59:36,750 INFO : Calculating fold changes
07 Dec 2024 18:59:40,005 INFO : 98% Done
07 Dec 2024 18:59:40,005 INFO : Done calculating fold changes.
07 Dec 2024 19:08:27,020 INFO : Creating and populating temp tables for Proportion values
07 Dec 2024 19:08:27,158 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
07 Dec 2024 19:08:29,685 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
07 Dec 2024 19:08:31,364 INFO : Cleaning up temp tables
07 Dec 2024 19:08:31,608 INFO : Completed import of Skyline document from ARP-Serum_RA_enriched_DDA_preFiltering_2024-11-30_21-00-26.sky.zip
07 Dec 2024 19:08:31,610 INFO : 100% Done
07 Dec 2024 19:08:32,260 INFO : Done importing xar
07 Dec 2024 19:08:32,261 INFO : Loading pages and webpart properties
07 Dec 2024 19:08:32,320 INFO : Done importing 4 page(s) with 11 webpart(s)
07 Dec 2024 19:08:32,320 INFO : Loading File Browser config
07 Dec 2024 19:08:32,320 INFO : Done importing File Browser config
07 Dec 2024 19:08:32,321 INFO : Starting Sample Status Data import
07 Dec 2024 19:08:32,322 INFO : No sample types XAR file to process.
07 Dec 2024 19:08:32,322 INFO : Finished importing Sample Status Data
07 Dec 2024 19:08:32,330 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
07 Dec 2024 19:08:32,332 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
07 Dec 2024 19:08:32,332 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
07 Dec 2024 19:08:32,333 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
07 Dec 2024 19:08:32,333 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
07 Dec 2024 19:08:32,333 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
07 Dec 2024 19:08:32,335 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
07 Dec 2024 19:08:32,340 INFO : Moving files to folder /Panorama Public/2024/U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis and creating symlinks
07 Dec 2024 19:08:41,818 INFO : Aligning data files urls in folder: /Panorama Public/2024/U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis
07 Dec 2024 19:08:41,834 INFO : Importing files metadata.
07 Dec 2024 19:08:41,836 INFO :
07 Dec 2024 19:08:41,836 INFO : Experiment import completed successfully.
07 Dec 2024 19:08:41,836 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
07 Dec 2024 19:41:53,326 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
07 Dec 2024 19:41:53,326 INFO :
07 Dec 2024 19:41:53,326 INFO : Checking for library folders.
07 Dec 2024 19:41:53,327 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
07 Dec 2024 19:49:19,488 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
07 Dec 2024 19:49:19,488 INFO :
07 Dec 2024 19:49:19,488 INFO : Finishing up experiment copy.
07 Dec 2024 19:49:19,490 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2024/U of Leipzig AG Bioanalytics - Carbonylation in Rheumatoid Arthritis
07 Dec 2024 19:49:19,491 INFO : Setting version on new experiment to 1
07 Dec 2024 19:49:19,493 INFO : Updating permanent link to point to the new copy of the data.
07 Dec 2024 19:49:19,515 INFO : Removing copy permissions given to Panorama Public
07 Dec 2024 19:49:19,519 INFO : Adding read permissions to all users that are folder admins in the source folder.
07 Dec 2024 19:49:19,519 INFO : Assigning ReaderRole to daniela.volke@bbz.uni-leipzig.de
07 Dec 2024 19:49:19,519 INFO : Assigning ReaderRole to ralf.hoffmann@bbz.uni-leipzig.de
07 Dec 2024 19:49:19,519 INFO : Assigning ReaderRole to juan_camilo.rojas_echeverri@uni-leipzig.de
07 Dec 2024 19:49:19,519 INFO : Assigning PanoramaPublicSubmitterRole to ralf.hoffmann@bbz.uni-leipzig.de
07 Dec 2024 19:49:19,519 INFO : Assigning PanoramaPublicSubmitterRole to juan_camilo.rojas_echeverri@uni-leipzig.de
07 Dec 2024 19:49:19,526 INFO : User ralf.hoffmann@bbz.uni-leipzig.de is already a member of group Panorama Public Submitters
07 Dec 2024 19:49:19,526 INFO : User juan_camilo.rojas_echeverri@uni-leipzig.de is already a member of group Panorama Public Submitters
07 Dec 2024 19:49:19,526 INFO : Updating the 'Raw Data' tab configuration
07 Dec 2024 19:49:19,528 INFO : Creating a reviewer account.
07 Dec 2024 19:49:19,572 INFO : Created reviewer with email: panorama+reviewer307@proteinms.net
07 Dec 2024 19:49:19,572 INFO : Generating password.
07 Dec 2024 19:49:19,708 INFO : Set reviewer password successfully.
07 Dec 2024 19:49:19,713 INFO : Adding user panorama+reviewer307@proteinms.net to group Reviewers
07 Dec 2024 19:49:19,715 INFO : Hiding the Data Pipeline tab.
07 Dec 2024 19:49:19,718 INFO : Updating Submission. Setting copiedExperimentId to 1954
07 Dec 2024 19:49:26,558 INFO : Assigning a ProteomeXchange ID.
07 Dec 2024 19:49:26,889 INFO : Assigned ProteomeXchange ID: PXD058666
07 Dec 2024 19:49:26,889 INFO : Assigning a DOI.
07 Dec 2024 19:49:28,597 INFO : Assigned DOI: 10.6069/w1vq-ft51
07 Dec 2024 19:49:28,712 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'