Copying experiment: Targeted MS assay to evaluate Cereblon neosubstrate changes in rabbit embryos following maternal administration of IMiDs

Pfizer MS Technologies - CRBN Neosubstrates

Job Status

Created: 2024-03-12 20:53:01
Modified: 2024-03-12 20:53:55
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Copying experiment: Targeted MS assay to evaluate Cereblon neosubstrate changes in rabbit embryos following maternal administration of IMiDs
File Path: /data/labkey/files/Panorama Public/2024/Pfizer MS Technologies - CRBN Neosubstrates/@files/Experiment_1842.log
Files: Experiment_1842.log
Completed Runs: Enriched_subset_column_loading_test_2024-03-11_13-53-11.sky.zip
CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition_2024-03-11_14-40-15.sky.zip
CRBN_neosubstrate_assay_enrichment_assessment_2024-03-11_14-43-06.sky.zip
Reverse_curve_enriched_top_transition_2024-03-11_14-44-10.sky.zip
Reverse_curve_unenriched_top_transition_2024-03-11_14-47-12.sky.zip
CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition_2024-03-11_17-39-14.sky.zip

Log File


12 Mar 2024 20:53:01,106 INFO : Copying experiment "Targeted MS assay to evaluate Cereblon neosubstrate changes in rabbit embryos following maternal administration of IMiDs" from folder /Pfizer - MS Technologies/CRBN Neosubstrates to /Panorama Public/2024/Pfizer MS Technologies - CRBN Neosubstrates
12 Mar 2024 20:53:01,106 INFO : =======================================
12 Mar 2024 20:53:01,154 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
12 Mar 2024 20:53:01,154 INFO :
12 Mar 2024 20:53:01,154 INFO : Exporting experiment.
12 Mar 2024 20:53:11,098 INFO : Exporting files metadata.
12 Mar 2024 20:53:11,103 INFO :
12 Mar 2024 20:53:11,103 INFO : Experiment export completed successfully.
12 Mar 2024 20:53:11,103 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
12 Mar 2024 20:53:11,125 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
12 Mar 2024 20:53:11,125 INFO :
12 Mar 2024 20:53:11,125 INFO : Importing experiment.
12 Mar 2024 20:53:11,128 INFO : Loading folder properties (folder type, settings and active modules)
12 Mar 2024 20:53:11,216 INFO : Done importing folder properties (folder type, settings and active modules)
12 Mar 2024 20:53:11,217 INFO : Loading container specific module properties
12 Mar 2024 20:53:11,221 INFO : Done importing container specific module properties
12 Mar 2024 20:53:11,222 INFO : Loading queries
12 Mar 2024 20:53:11,226 INFO : 1 query imported
12 Mar 2024 20:53:11,226 INFO : Done importing queries
12 Mar 2024 20:53:11,227 INFO : Loading etl definitions
12 Mar 2024 20:53:11,228 INFO : Loading wikis
12 Mar 2024 20:53:11,229 INFO : 0 wikis imported
12 Mar 2024 20:53:11,229 INFO : Done importing wikis
12 Mar 2024 20:53:11,230 INFO : Starting Data Class Importer
12 Mar 2024 20:53:11,230 INFO : No types XAR file to process.
12 Mar 2024 20:53:11,231 INFO : Finished Data Class Importer
12 Mar 2024 20:53:11,231 INFO : Starting to copy files
12 Mar 2024 20:53:11,231 INFO : Copied 0 files
12 Mar 2024 20:53:11,231 INFO : Ensuring exp.data rows exist for imported files
12 Mar 2024 20:53:11,306 INFO : Starting Sample Type Importer
12 Mar 2024 20:53:11,306 INFO : No types XAR file to process.
12 Mar 2024 20:53:11,306 INFO : Finished Sample Type Importer
12 Mar 2024 20:53:11,308 INFO : Loading xar
12 Mar 2024 20:53:13,156 INFO : Starting import from Enriched_subset_column_loading_test_2024-03-11_13-53-11.sky.zip
12 Mar 2024 20:53:13,159 INFO : Starting to import Skyline document from Enriched_subset_column_loading_test_2024-03-11_13-53-11.sky.zip
12 Mar 2024 20:53:13,161 INFO : Expanding Enriched_subset_column_loading_test.skyd
12 Mar 2024 20:53:13,224 INFO : Expanding Enriched_subset_column_loading_test.sky.view
12 Mar 2024 20:53:13,225 INFO : Expanding Enriched_subset_column_loading_test.sky
12 Mar 2024 20:53:13,226 INFO : Expanding Enriched_subset_column_loading_test.skyl
12 Mar 2024 20:53:13,245 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:13,249 INFO : 9% Done
12 Mar 2024 20:53:13,681 INFO : 14% Done
12 Mar 2024 20:53:13,681 INFO : Inserting SALL4
12 Mar 2024 20:53:13,687 INFO : 42% Done
12 Mar 2024 20:53:13,713 INFO : Inserting TBX5
12 Mar 2024 20:53:13,720 INFO : 68% Done
12 Mar 2024 20:53:13,744 INFO : 70% Done
12 Mar 2024 20:53:13,744 INFO : Inserting ZBTB16
12 Mar 2024 20:53:13,751 INFO : 98% Done
12 Mar 2024 20:53:13,775 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:16,452 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:16,509 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:16,513 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:16,516 INFO : Cleaning up temp tables
12 Mar 2024 20:53:17,440 INFO : Completed import of Skyline document from Enriched_subset_column_loading_test_2024-03-11_13-53-11.sky.zip
12 Mar 2024 20:53:17,442 INFO : 100% Done
12 Mar 2024 20:53:17,449 INFO : Starting import from CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition_2024-03-11_14-40-15.sky.zip
12 Mar 2024 20:53:17,450 INFO : Starting to import Skyline document from CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition_2024-03-11_14-40-15.sky.zip
12 Mar 2024 20:53:17,451 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition.skyd
12 Mar 2024 20:53:17,714 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition.sky.view
12 Mar 2024 20:53:17,715 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition.sky
12 Mar 2024 20:53:17,721 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition.skyl
12 Mar 2024 20:53:17,750 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:17,754 INFO : 3% Done
12 Mar 2024 20:53:18,385 INFO : Inserting CSNK1A1
12 Mar 2024 20:53:18,393 INFO : 9% Done
12 Mar 2024 20:53:18,447 INFO : Inserting DTWD1
12 Mar 2024 20:53:18,454 INFO : 14% Done
12 Mar 2024 20:53:18,505 INFO : Inserting GSPT1
12 Mar 2024 20:53:18,513 INFO : 19% Done
12 Mar 2024 20:53:18,561 INFO : Inserting GZF1
12 Mar 2024 20:53:18,568 INFO : 24% Done
12 Mar 2024 20:53:18,615 INFO : Inserting RAB28
12 Mar 2024 20:53:18,622 INFO : 28% Done
12 Mar 2024 20:53:18,672 INFO : 29% Done
12 Mar 2024 20:53:18,672 INFO : Inserting ZBTB39
12 Mar 2024 20:53:18,678 INFO : 34% Done
12 Mar 2024 20:53:18,727 INFO : Inserting ZFP91
12 Mar 2024 20:53:18,734 INFO : 38% Done
12 Mar 2024 20:53:18,784 INFO : 39% Done
12 Mar 2024 20:53:18,784 INFO : Inserting ZNF276
12 Mar 2024 20:53:18,790 INFO : 44% Done
12 Mar 2024 20:53:18,839 INFO : Inserting ZNF692
12 Mar 2024 20:53:18,844 INFO : 47% Done
12 Mar 2024 20:53:18,877 INFO : Inserting ZNF827
12 Mar 2024 20:53:18,883 INFO : 50% Done
12 Mar 2024 20:53:18,912 INFO : Inserting PARK7
12 Mar 2024 20:53:18,919 INFO : 55% Done
12 Mar 2024 20:53:18,968 INFO : Inserting GAPDH
12 Mar 2024 20:53:18,975 INFO : 60% Done
12 Mar 2024 20:53:19,027 INFO : 65% Done
12 Mar 2024 20:53:19,076 INFO : Inserting BSG-Rabbit
12 Mar 2024 20:53:19,083 INFO : 70% Done
12 Mar 2024 20:53:19,131 INFO : Inserting ESCO2-rabbit
12 Mar 2024 20:53:19,144 INFO : 74% Done
12 Mar 2024 20:53:19,174 INFO : Inserting GLUL
12 Mar 2024 20:53:19,181 INFO : 78% Done
12 Mar 2024 20:53:19,230 INFO : Inserting MEIS2
12 Mar 2024 20:53:19,237 INFO : 83% Done
12 Mar 2024 20:53:19,285 INFO : Inserting PATZ1
12 Mar 2024 20:53:19,292 INFO : 88% Done
12 Mar 2024 20:53:19,342 INFO : Inserting SLC16A1-rabbit
12 Mar 2024 20:53:19,348 INFO : 93% Done
12 Mar 2024 20:53:19,395 INFO : Inserting WIZ
12 Mar 2024 20:53:19,401 INFO : 98% Done
12 Mar 2024 20:53:19,454 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:26,140 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:26,208 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:26,284 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:26,311 INFO : Cleaning up temp tables
12 Mar 2024 20:53:26,943 INFO : Completed import of Skyline document from CRBN_neosubstrate_rabbit_embryo_IMiD_unenriched_top_transition_2024-03-11_14-40-15.sky.zip
12 Mar 2024 20:53:26,945 INFO : 100% Done
12 Mar 2024 20:53:26,950 INFO : Starting import from CRBN_neosubstrate_assay_enrichment_assessment_2024-03-11_14-43-06.sky.zip
12 Mar 2024 20:53:26,952 INFO : Starting to import Skyline document from CRBN_neosubstrate_assay_enrichment_assessment_2024-03-11_14-43-06.sky.zip
12 Mar 2024 20:53:26,953 INFO : Expanding CRBN_neosubstrate_assay_enrichment_assessment.skyd
12 Mar 2024 20:53:26,995 INFO : Expanding CRBN_neosubstrate_assay_enrichment_assessment.sky.view
12 Mar 2024 20:53:26,998 INFO : Expanding CRBN_neosubstrate_assay_enrichment_assessment.sky
12 Mar 2024 20:53:27,000 INFO : Expanding CRBN_neosubstrate_assay_enrichment_assessment.skyl
12 Mar 2024 20:53:27,021 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:27,025 INFO : 4% Done
12 Mar 2024 20:53:27,580 INFO : 7% Done
12 Mar 2024 20:53:27,580 INFO : Inserting SALL4
12 Mar 2024 20:53:27,585 INFO : 12% Done
12 Mar 2024 20:53:27,594 INFO : Inserting TBX5
12 Mar 2024 20:53:27,600 INFO : 18% Done
12 Mar 2024 20:53:27,608 INFO : 23% Done
12 Mar 2024 20:53:27,614 INFO : Inserting ZBTB16
12 Mar 2024 20:53:27,618 INFO : 28% Done
12 Mar 2024 20:53:27,625 INFO : 29% Done
12 Mar 2024 20:53:27,625 INFO : Inserting TP63
12 Mar 2024 20:53:27,629 INFO : 35% Done
12 Mar 2024 20:53:27,637 INFO : 40% Done
12 Mar 2024 20:53:27,643 INFO : Inserting IKZF1-Rabbit
12 Mar 2024 20:53:27,647 INFO : 46% Done
12 Mar 2024 20:53:27,654 INFO : 47% Done
12 Mar 2024 20:53:27,654 INFO : Inserting IKZF2
12 Mar 2024 20:53:27,659 INFO : 54% Done
12 Mar 2024 20:53:27,668 INFO : 59% Done
12 Mar 2024 20:53:27,674 INFO : Inserting IKZF3
12 Mar 2024 20:53:27,678 INFO : 65% Done
12 Mar 2024 20:53:27,684 INFO : Inserting IKZF4
12 Mar 2024 20:53:27,688 INFO : 70% Done
12 Mar 2024 20:53:27,696 INFO : 76% Done
12 Mar 2024 20:53:27,703 INFO : Inserting CRBN
12 Mar 2024 20:53:27,707 INFO : 81% Done
12 Mar 2024 20:53:27,715 INFO : 87% Done
12 Mar 2024 20:53:27,721 INFO : Inserting GAPDH
12 Mar 2024 20:53:27,725 INFO : 92% Done
12 Mar 2024 20:53:27,732 INFO : 94% Done
12 Mar 2024 20:53:27,732 INFO : Inserting PARK7
12 Mar 2024 20:53:27,736 INFO : 98% Done
12 Mar 2024 20:53:27,744 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:30,966 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:31,022 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:31,027 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:31,031 INFO : Cleaning up temp tables
12 Mar 2024 20:53:31,627 INFO : Completed import of Skyline document from CRBN_neosubstrate_assay_enrichment_assessment_2024-03-11_14-43-06.sky.zip
12 Mar 2024 20:53:31,630 INFO : 100% Done
12 Mar 2024 20:53:31,635 INFO : Starting import from Reverse_curve_enriched_top_transition_2024-03-11_14-44-10.sky.zip
12 Mar 2024 20:53:31,637 INFO : Starting to import Skyline document from Reverse_curve_enriched_top_transition_2024-03-11_14-44-10.sky.zip
12 Mar 2024 20:53:31,637 INFO : Expanding Reverse_curve_enriched_top_transition.skyd
12 Mar 2024 20:53:31,812 INFO : Expanding Reverse_curve_enriched_top_transition.sky.view
12 Mar 2024 20:53:31,814 INFO : Expanding Reverse_curve_enriched_top_transition.sky
12 Mar 2024 20:53:31,819 INFO : Expanding Reverse_curve_enriched_top_transition.skyl
12 Mar 2024 20:53:31,820 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:31,826 INFO : 5% Done
12 Mar 2024 20:53:32,558 INFO : Inserting SALL4
12 Mar 2024 20:53:32,565 INFO : 12% Done
12 Mar 2024 20:53:32,599 INFO : 13% Done
12 Mar 2024 20:53:32,599 INFO : Inserting TBX5
12 Mar 2024 20:53:32,608 INFO : 18% Done
12 Mar 2024 20:53:32,641 INFO : 25% Done
12 Mar 2024 20:53:32,673 INFO : Inserting ZBTB16
12 Mar 2024 20:53:32,678 INFO : 31% Done
12 Mar 2024 20:53:32,710 INFO : Inserting TP63
12 Mar 2024 20:53:32,715 INFO : 35% Done
12 Mar 2024 20:53:32,739 INFO : 41% Done
12 Mar 2024 20:53:32,770 INFO : Inserting IKZF1-Rabbit
12 Mar 2024 20:53:32,777 INFO : 47% Done
12 Mar 2024 20:53:32,809 INFO : 48% Done
12 Mar 2024 20:53:32,809 INFO : Inserting IKZF2
12 Mar 2024 20:53:32,814 INFO : 51% Done
12 Mar 2024 20:53:32,839 INFO : 58% Done
12 Mar 2024 20:53:32,874 INFO : Inserting IKZF3
12 Mar 2024 20:53:32,879 INFO : 62% Done
12 Mar 2024 20:53:32,902 INFO : Inserting IKZF4
12 Mar 2024 20:53:32,908 INFO : 68% Done
12 Mar 2024 20:53:32,942 INFO : 74% Done
12 Mar 2024 20:53:32,973 INFO : Inserting CRBN
12 Mar 2024 20:53:32,979 INFO : 79% Done
12 Mar 2024 20:53:33,014 INFO : 85% Done
12 Mar 2024 20:53:33,046 INFO : Inserting GAPDH
12 Mar 2024 20:53:33,052 INFO : 92% Done
12 Mar 2024 20:53:33,085 INFO : Inserting PARK7
12 Mar 2024 20:53:33,091 INFO : 98% Done
12 Mar 2024 20:53:33,126 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:33,144 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:33,207 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:33,245 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:33,260 INFO : Cleaning up temp tables
12 Mar 2024 20:53:33,963 INFO : Completed import of Skyline document from Reverse_curve_enriched_top_transition_2024-03-11_14-44-10.sky.zip
12 Mar 2024 20:53:33,965 INFO : 100% Done
12 Mar 2024 20:53:33,970 INFO : Starting import from Reverse_curve_unenriched_top_transition_2024-03-11_14-47-12.sky.zip
12 Mar 2024 20:53:33,971 INFO : Starting to import Skyline document from Reverse_curve_unenriched_top_transition_2024-03-11_14-47-12.sky.zip
12 Mar 2024 20:53:33,972 INFO : Expanding Reverse_curve_unenriched_top_transition.skyd
12 Mar 2024 20:53:34,234 INFO : Expanding Reverse_curve_unenriched_top_transition.sky.view
12 Mar 2024 20:53:34,235 INFO : Expanding Reverse_curve_unenriched_top_transition.sky
12 Mar 2024 20:53:34,239 INFO : Expanding Reverse_curve_unenriched_top_transition.skyl
12 Mar 2024 20:53:34,266 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:34,269 INFO : 3% Done
12 Mar 2024 20:53:35,145 INFO : Inserting CSNK1A1
12 Mar 2024 20:53:35,152 INFO : 9% Done
12 Mar 2024 20:53:35,189 INFO : Inserting DTWD1
12 Mar 2024 20:53:35,194 INFO : 15% Done
12 Mar 2024 20:53:35,226 INFO : Inserting GSPT1
12 Mar 2024 20:53:35,232 INFO : 19% Done
12 Mar 2024 20:53:35,258 INFO : Inserting GZF1
12 Mar 2024 20:53:35,265 INFO : 24% Done
12 Mar 2024 20:53:35,299 INFO : Inserting RAB28
12 Mar 2024 20:53:35,306 INFO : 29% Done
12 Mar 2024 20:53:35,339 INFO : Inserting ZBTB39
12 Mar 2024 20:53:35,347 INFO : 33% Done
12 Mar 2024 20:53:35,379 INFO : Inserting ZFP91
12 Mar 2024 20:53:35,385 INFO : 38% Done
12 Mar 2024 20:53:35,419 INFO : Inserting ZNF276
12 Mar 2024 20:53:35,426 INFO : 42% Done
12 Mar 2024 20:53:35,456 INFO : Inserting ZNF692
12 Mar 2024 20:53:35,463 INFO : 46% Done
12 Mar 2024 20:53:35,485 INFO : Inserting ZNF827
12 Mar 2024 20:53:35,492 INFO : 50% Done
12 Mar 2024 20:53:35,515 INFO : Inserting PARK7
12 Mar 2024 20:53:35,521 INFO : 54% Done
12 Mar 2024 20:53:35,553 INFO : Inserting GAPDH
12 Mar 2024 20:53:35,559 INFO : 59% Done
12 Mar 2024 20:53:35,593 INFO : 63% Done
12 Mar 2024 20:53:35,624 INFO : 64% Done
12 Mar 2024 20:53:35,624 INFO : Inserting BSG-Rabbit
12 Mar 2024 20:53:35,632 INFO : 69% Done
12 Mar 2024 20:53:35,664 INFO : Inserting ESCO2-rabbit
12 Mar 2024 20:53:35,672 INFO : 74% Done
12 Mar 2024 20:53:35,703 INFO : Inserting GLUL
12 Mar 2024 20:53:35,709 INFO : 78% Done
12 Mar 2024 20:53:35,741 INFO : Inserting MEIS2
12 Mar 2024 20:53:35,748 INFO : 83% Done
12 Mar 2024 20:53:35,781 INFO : Inserting PATZ1
12 Mar 2024 20:53:35,788 INFO : 88% Done
12 Mar 2024 20:53:35,817 INFO : Inserting SLC16A1-rabbit
12 Mar 2024 20:53:35,825 INFO : 93% Done
12 Mar 2024 20:53:35,857 INFO : 94% Done
12 Mar 2024 20:53:35,857 INFO : Inserting WIZ
12 Mar 2024 20:53:35,864 INFO : 98% Done
12 Mar 2024 20:53:35,895 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:43,630 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:43,693 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:43,740 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:43,757 INFO : Cleaning up temp tables
12 Mar 2024 20:53:44,488 INFO : Completed import of Skyline document from Reverse_curve_unenriched_top_transition_2024-03-11_14-47-12.sky.zip
12 Mar 2024 20:53:44,490 INFO : 100% Done
12 Mar 2024 20:53:44,495 INFO : Starting import from CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition_2024-03-11_17-39-14.sky.zip
12 Mar 2024 20:53:44,497 INFO : Starting to import Skyline document from CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition_2024-03-11_17-39-14.sky.zip
12 Mar 2024 20:53:44,498 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition.skyd
12 Mar 2024 20:53:44,813 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition.sky.view
12 Mar 2024 20:53:44,814 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition.sky
12 Mar 2024 20:53:44,818 INFO : Expanding CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition.skyl
12 Mar 2024 20:53:44,840 WARN : The version of this Skyline document is 23.11. This is newer than the highest supported version 23.1
12 Mar 2024 20:53:44,844 INFO : 5% Done
12 Mar 2024 20:53:45,876 INFO : Inserting SALL4
12 Mar 2024 20:53:45,885 INFO : 12% Done
12 Mar 2024 20:53:45,935 INFO : 13% Done
12 Mar 2024 20:53:45,935 INFO : Inserting TBX5
12 Mar 2024 20:53:45,942 INFO : 15% Done
12 Mar 2024 20:53:45,976 INFO : 21% Done
12 Mar 2024 20:53:46,022 INFO : Inserting ZBTB16
12 Mar 2024 20:53:46,032 INFO : 27% Done
12 Mar 2024 20:53:46,078 INFO : Inserting TP63
12 Mar 2024 20:53:46,087 INFO : 31% Done
12 Mar 2024 20:53:46,124 INFO : 38% Done
12 Mar 2024 20:53:46,173 INFO : 39% Done
12 Mar 2024 20:53:46,173 INFO : Inserting IKZF1-Rabbit
12 Mar 2024 20:53:46,181 INFO : 45% Done
12 Mar 2024 20:53:46,227 INFO : Inserting IKZF2
12 Mar 2024 20:53:46,235 INFO : 49% Done
12 Mar 2024 20:53:46,268 INFO : 54% Done
12 Mar 2024 20:53:46,297 INFO : Inserting IKZF3
12 Mar 2024 20:53:46,307 INFO : 58% Done
12 Mar 2024 20:53:46,337 INFO : 59% Done
12 Mar 2024 20:53:46,337 INFO : Inserting IKZF4
12 Mar 2024 20:53:46,343 INFO : 65% Done
12 Mar 2024 20:53:46,396 INFO : 72% Done
12 Mar 2024 20:53:46,445 INFO : Inserting CRBN
12 Mar 2024 20:53:46,453 INFO : 78% Done
12 Mar 2024 20:53:46,506 INFO : 85% Done
12 Mar 2024 20:53:46,553 INFO : Inserting GAPDH
12 Mar 2024 20:53:46,560 INFO : 91% Done
12 Mar 2024 20:53:46,607 INFO : Inserting PARK7
12 Mar 2024 20:53:46,614 INFO : 98% Done
12 Mar 2024 20:53:46,665 INFO : Done parsing Skyline document.
12 Mar 2024 20:53:50,665 INFO : Creating and populating temp tables for Proportion values
12 Mar 2024 20:53:50,732 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
12 Mar 2024 20:53:50,794 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
12 Mar 2024 20:53:50,816 INFO : Cleaning up temp tables
12 Mar 2024 20:53:51,527 INFO : Completed import of Skyline document from CRBN_neosubstrate_rabbit_embryo_IMiD_enriched_top_transition_2024-03-11_17-39-14.sky.zip
12 Mar 2024 20:53:51,530 INFO : 100% Done
12 Mar 2024 20:53:51,549 INFO : Done importing xar
12 Mar 2024 20:53:51,550 INFO : Loading pages and webpart properties
12 Mar 2024 20:53:51,611 INFO : Done importing 3 page(s) with 4 webpart(s)
12 Mar 2024 20:53:51,611 INFO : Loading File Browser config
12 Mar 2024 20:53:51,611 INFO : Done importing File Browser config
12 Mar 2024 20:53:51,612 INFO : Starting Sample Status Data import
12 Mar 2024 20:53:51,613 INFO : No sample types XAR file to process.
12 Mar 2024 20:53:51,613 INFO : Finished importing Sample Status Data
12 Mar 2024 20:53:51,617 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
12 Mar 2024 20:53:51,619 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
12 Mar 2024 20:53:51,620 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
12 Mar 2024 20:53:51,620 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
12 Mar 2024 20:53:51,621 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
12 Mar 2024 20:53:51,621 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
12 Mar 2024 20:53:51,623 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
12 Mar 2024 20:53:51,630 INFO : Moving files to folder /Panorama Public/2024/Pfizer MS Technologies - CRBN Neosubstrates and creating symlinks
12 Mar 2024 20:53:52,120 INFO : Aligning data files urls in folder: /Panorama Public/2024/Pfizer MS Technologies - CRBN Neosubstrates
12 Mar 2024 20:53:52,149 INFO : Importing files metadata.
12 Mar 2024 20:53:52,150 INFO :
12 Mar 2024 20:53:52,151 INFO : Experiment import completed successfully.
12 Mar 2024 20:53:52,151 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
12 Mar 2024 20:53:52,175 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
12 Mar 2024 20:53:52,175 INFO :
12 Mar 2024 20:53:52,175 INFO : Checking for library folders.
12 Mar 2024 20:53:52,176 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
12 Mar 2024 20:53:52,194 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
12 Mar 2024 20:53:52,194 INFO :
12 Mar 2024 20:53:52,194 INFO : Finishing up experiment copy.
12 Mar 2024 20:53:52,196 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2024/Pfizer MS Technologies - CRBN Neosubstrates
12 Mar 2024 20:53:52,196 INFO : Setting version on new experiment to 1
12 Mar 2024 20:53:52,198 INFO : Updating permanent link to point to the new copy of the data.
12 Mar 2024 20:53:52,223 INFO : Removing copy permissions given to Panorama Public
12 Mar 2024 20:53:52,227 INFO : Adding read permissions to all users that are folder admins in the source folder.
12 Mar 2024 20:53:52,228 INFO : Assigning ReaderRole to joel.federspiel@pfizer.com
12 Mar 2024 20:53:52,228 INFO : Assigning ReaderRole to mireia.fernandezocana@pfizer.com
12 Mar 2024 20:53:52,228 INFO : Assigning ReaderRole to hyunsuk.suh@pfizer.com
12 Mar 2024 20:53:52,228 INFO : Assigning ReaderRole to carlos.moralesbetanzos@pfizer.com
12 Mar 2024 20:53:52,228 INFO : Assigning PanoramaPublicSubmitterRole to joel.federspiel@pfizer.com
12 Mar 2024 20:53:52,228 INFO : Assigning PanoramaPublicSubmitterRole to mireia.fernandezocana@pfizer.com
12 Mar 2024 20:53:52,236 INFO : User joel.federspiel@pfizer.com is already a member of group Panorama Public Submitters
12 Mar 2024 20:53:52,236 INFO : User mireia.fernandezocana@pfizer.com is already a member of group Panorama Public Submitters
12 Mar 2024 20:53:52,236 INFO : Updating the 'Raw Data' tab configuration
12 Mar 2024 20:53:52,237 INFO : Creating a reviewer account.
12 Mar 2024 20:53:52,321 INFO : Created reviewer with email: panorama+reviewer249@proteinms.net
12 Mar 2024 20:53:52,321 INFO : Generating password.
12 Mar 2024 20:53:52,455 INFO : Set reviewer password successfully.
12 Mar 2024 20:53:52,463 INFO : Adding user panorama+reviewer249@proteinms.net to group Reviewers
12 Mar 2024 20:53:52,465 INFO : Hiding the Data Pipeline tab.
12 Mar 2024 20:53:52,469 INFO : Updating Submission. Setting copiedExperimentId to 1786
12 Mar 2024 20:53:54,270 INFO : Assigning a ProteomeXchange ID.
12 Mar 2024 20:53:54,577 INFO : Assigned ProteomeXchange ID: PXD050568
12 Mar 2024 20:53:54,577 INFO : Assigning a DOI.
12 Mar 2024 20:53:55,706 INFO : Assigned DOI: 10.6069/5pgn-7596
12 Mar 2024 20:53:55,852 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'