18 Jun 2024 13:55:02,440 INFO : Copying experiment "An optimized and robust workflow for quantifying the canonical histone ubiquitination marks H2AK119ub and H2BK120ub by LC-MS/MS" from folder /Case Western Reserve U - Lund Lab/2024_HistoneUb to /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb
18 Jun 2024 13:55:02,440 INFO : =======================================
18 Jun 2024 13:55:02,453 DEBUG: Resetting Job ID: 6d93576d-0fe2-103d-b086-dc22ffcda54f
18 Jun 2024 13:55:02,475 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
18 Jun 2024 13:55:02,475 INFO : 
18 Jun 2024 13:55:02,475 INFO : Exporting experiment.
18 Jun 2024 13:55:12,043 INFO : Exporting files metadata.
18 Jun 2024 13:55:12,043 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export
18 Jun 2024 13:55:12,045 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes
18 Jun 2024 13:55:12,050 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:12,056 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig03_ms2
18 Jun 2024 13:55:12,065 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig04_Isotopes
18 Jun 2024 13:55:12,071 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike
18 Jun 2024 13:55:12,097 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors
18 Jun 2024 13:55:12,098 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING
18 Jun 2024 13:55:12,108 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano
18 Jun 2024 13:55:12,126 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito
18 Jun 2024 13:55:12,145 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD
18 Jun 2024 13:55:12,169 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1
18 Jun 2024 13:55:12,189 DEBUG: [/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo]  Writing files metadata to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo
18 Jun 2024 13:55:12,209 INFO : 
18 Jun 2024 13:55:12,209 INFO : Experiment export completed successfully.
18 Jun 2024 13:55:12,210 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
18 Jun 2024 13:55:12,229 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
18 Jun 2024 13:55:12,229 INFO : 
18 Jun 2024 13:55:12,229 INFO : Importing experiment.
18 Jun 2024 13:55:12,230 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export
18 Jun 2024 13:55:12,231 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:12,231 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb] Folder type: Targeted MS
18 Jun 2024 13:55:12,231 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:12,308 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:12,309 INFO : Loading container specific module properties
18 Jun 2024 13:55:12,312 INFO : Done importing container specific module properties
18 Jun 2024 13:55:12,313 INFO : Loading queries
18 Jun 2024 13:55:12,316 INFO : 1 query imported
18 Jun 2024 13:55:12,316 INFO : Done importing queries
18 Jun 2024 13:55:12,317 INFO : Loading etl definitions
18 Jun 2024 13:55:12,318 INFO : Loading wikis
18 Jun 2024 13:55:12,320 INFO : 0 wikis imported
18 Jun 2024 13:55:12,320 INFO : Done importing wikis
18 Jun 2024 13:55:12,321 INFO : Starting Data Class Importer
18 Jun 2024 13:55:12,322 INFO : No types XAR file to process.
18 Jun 2024 13:55:12,322 INFO : Finished Data Class Importer
18 Jun 2024 13:55:12,322 INFO : Starting to copy files
18 Jun 2024 13:55:12,322 INFO : Copied 0 files
18 Jun 2024 13:55:12,322 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:13,001 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:13,001 INFO : No types XAR file to process.
18 Jun 2024 13:55:13,001 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:13,003 INFO : Loading xar
18 Jun 2024 13:55:13,013 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13282:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:13,015 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13282:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:13,017 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13282:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:13,017 DEBUG: Protocol import complete
18 Jun 2024 13:55:13,019 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-13282:An+optimized+and+robust+workflow+for+quantifying+the+canonical+histone+ubiquitination+marks+H2AK119ub+and+H2BK120ub+by+LC-MS%2FMS'
18 Jun 2024 13:55:13,019 DEBUG: Experiment/Run group import complete
18 Jun 2024 13:55:13,027 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:13,027 INFO : Done importing xar
18 Jun 2024 13:55:13,028 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:13,091 INFO : Done importing 3 page(s) with 5 webpart(s)
18 Jun 2024 13:55:13,091 INFO : Loading File Browser config
18 Jun 2024 13:55:13,091 INFO : Done importing File Browser config
18 Jun 2024 13:55:13,092 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:13,092 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:13,092 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:13,096 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:13,099 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:13,099 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:13,100 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:13,100 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:13,100 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:13,101 INFO : Loading subfolders and container tabs
18 Jun 2024 13:55:13,167 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes
18 Jun 2024 13:55:13,167 INFO : Loading folder archive for Fig01_Synthetic_Spikes
18 Jun 2024 13:55:13,167 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes
18 Jun 2024 13:55:13,168 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:13,168 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes] Folder type: Targeted MS
18 Jun 2024 13:55:13,168 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:13,240 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:13,241 INFO : Loading container specific module properties
18 Jun 2024 13:55:13,245 INFO : Done importing container specific module properties
18 Jun 2024 13:55:13,246 INFO : Loading queries
18 Jun 2024 13:55:13,249 INFO : 1 query imported
18 Jun 2024 13:55:13,249 INFO : Done importing queries
18 Jun 2024 13:55:13,250 INFO : Loading etl definitions
18 Jun 2024 13:55:13,251 INFO : Loading wikis
18 Jun 2024 13:55:13,252 INFO : 0 wikis imported
18 Jun 2024 13:55:13,252 INFO : Done importing wikis
18 Jun 2024 13:55:13,253 INFO : Starting Data Class Importer
18 Jun 2024 13:55:13,253 INFO : No types XAR file to process.
18 Jun 2024 13:55:13,253 INFO : Finished Data Class Importer
18 Jun 2024 13:55:13,254 INFO : Starting to copy files
18 Jun 2024 13:55:13,254 INFO : Copied 0 files
18 Jun 2024 13:55:13,254 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:13,258 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:13,259 INFO : No types XAR file to process.
18 Jun 2024 13:55:13,259 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:13,260 INFO : Loading xar
18 Jun 2024 13:55:13,530 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:13,532 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:13,534 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:13,534 DEBUG: Protocol import complete
18 Jun 2024 13:55:13,542 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:13,547 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:13,554 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13283:4eb968a4-0b1a-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:13,557 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13283:4eb96860-0b1a-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:13,557 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:13,559 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13283:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:13,560 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13283:952455bb-0b1a-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:13,564 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes/xar/experiments_and_runs.xar.exploded/Run206061/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd into the system
18 Jun 2024 13:55:13,564 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes/xar/experiments_and_runs.xar.exploded/Run206061/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd into the system
18 Jun 2024 13:55:13,564 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes/xar/experiments_and_runs.xar.exploded/Run206061/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip into the system
18 Jun 2024 13:55:13,565 INFO : Starting import from 01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:13,568 INFO : Starting to import Skyline document from 01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:13,569 INFO : Expanding 01_20191216_HEK_histoneUB_noProp.skyd
18 Jun 2024 13:55:13,717 INFO : Expanding 01_20191216_HEK_histoneUB_noProp.sky.view
18 Jun 2024 13:55:13,718 INFO : Expanding 01_20191216_HEK_histoneUB_noProp.sky
18 Jun 2024 13:55:13,725 INFO : 3% Done
18 Jun 2024 13:55:13,932 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:13,933 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:14,088 INFO : Inserting Ub01_H2A_common13
18 Jun 2024 13:55:14,099 INFO : 8% Done
18 Jun 2024 13:55:14,152 INFO : 12% Done
18 Jun 2024 13:55:14,189 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:14,190 INFO : Inserting Ub02_H2A_common13
18 Jun 2024 13:55:14,201 INFO : 17% Done
18 Jun 2024 13:55:14,247 INFO : 22% Done
18 Jun 2024 13:55:14,293 INFO : 25% Done
18 Jun 2024 13:55:14,328 INFO : 27% Done
18 Jun 2024 13:55:14,351 INFO : 30% Done
18 Jun 2024 13:55:14,374 DEBUG: Total peptides inserted: 5
18 Jun 2024 13:55:14,374 INFO : Inserting Ub03_H2A_common13
18 Jun 2024 13:55:14,385 INFO : 34% Done
18 Jun 2024 13:55:14,431 INFO : 38% Done
18 Jun 2024 13:55:14,465 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:14,466 INFO : 39% Done
18 Jun 2024 13:55:14,466 INFO : Inserting Ub04_H2A_common24
18 Jun 2024 13:55:14,477 INFO : 42% Done
18 Jun 2024 13:55:14,532 INFO : 50% Done
18 Jun 2024 13:55:14,598 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:14,598 INFO : Inserting Ub06_H2A_common24
18 Jun 2024 13:55:14,610 INFO : 54% Done
18 Jun 2024 13:55:14,654 INFO : 59% Done
18 Jun 2024 13:55:14,690 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:14,690 INFO : Inserting Ub08_H2B_SAK
18 Jun 2024 13:55:14,696 INFO : 62% Done
18 Jun 2024 13:55:14,719 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:14,719 INFO : Inserting Ub09_H2B_SSK
18 Jun 2024 13:55:14,725 INFO : 65% Done
18 Jun 2024 13:55:14,748 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:14,748 INFO : Inserting Ub10_H2B_SSK
18 Jun 2024 13:55:14,753 INFO : 68% Done
18 Jun 2024 13:55:14,785 INFO : 71% Done
18 Jun 2024 13:55:14,824 INFO : 75% Done
18 Jun 2024 13:55:14,854 INFO : 77% Done
18 Jun 2024 13:55:14,874 INFO : 80% Done
18 Jun 2024 13:55:14,903 DEBUG: Total peptides inserted: 5
18 Jun 2024 13:55:14,905 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:14,966 INFO : Calculating fold changes
18 Jun 2024 13:55:14,966 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:15,573 INFO : 98% Done
18 Jun 2024 13:55:15,573 INFO : Done calculating fold changes.
18 Jun 2024 13:55:15,574 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:15,580 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:15,592 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:15,595 INFO : Cleaning up temp tables
18 Jun 2024 13:55:15,914 INFO : Completed import of Skyline document from 01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:15,916 INFO : 100% Done
18 Jun 2024 13:55:15,920 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes/xar/experiments_and_runs.xar.exploded/Run206061/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip into the system
18 Jun 2024 13:55:15,924 INFO : Done importing xar
18 Jun 2024 13:55:15,925 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:16,006 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:16,006 INFO : Loading File Browser config
18 Jun 2024 13:55:16,006 INFO : Done importing File Browser config
18 Jun 2024 13:55:16,007 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:16,007 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:16,007 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:16,011 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:16,013 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:16,014 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:16,014 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:16,015 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:16,015 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:16,017 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
18 Jun 2024 13:55:16,021 INFO : Adding runs imported in subfolders.
18 Jun 2024 13:55:16,029 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes and creating symlinks
18 Jun 2024 13:55:16,030 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33
18 Jun 2024 13:55:16,032 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky
18 Jun 2024 13:55:16,033 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky
18 Jun 2024 13:55:16,034 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd
18 Jun 2024 13:55:16,035 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd
18 Jun 2024 13:55:16,037 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky.view
18 Jun 2024 13:55:16,038 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.sky.view
18 Jun 2024 13:55:16,040 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/SupplementaryFiles
18 Jun 2024 13:55:16,041 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx
18 Jun 2024 13:55:16,042 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx
18 Jun 2024 13:55:16,044 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles
18 Jun 2024 13:55:16,045 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_SpikeDigest.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_SpikeDigest.raw
18 Jun 2024 13:55:16,046 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_SpikeDigest.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_SpikeDigest.raw
18 Jun 2024 13:55:16,047 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_noSpikeDigest.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_noSpikeDigest.raw
18 Jun 2024 13:55:16,048 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_noSpikeDigest.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/RawFiles/HEK_HistoneUb_Ctrl_noSpikeDigest.raw
18 Jun 2024 13:55:16,050 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:16,051 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:16,053 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/assaydata
18 Jun 2024 13:55:16,053 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes
18 Jun 2024 13:55:16,054 DEBUG: Setting filePathRoot on copied run: 01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files
18 Jun 2024 13:55:16,056 DEBUG: Setting dataFileUri on copied data: 01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33.sky.zip
18 Jun 2024 13:55:16,058 DEBUG: Setting dataFileUri on copied data: 01_20191216_HEK_histoneUB_noProp.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes/@files/01_20191216_HEK_histoneUB_noProp_2024-06-12_14-50-33/01_20191216_HEK_histoneUB_noProp.skyd
18 Jun 2024 13:55:16,058 INFO : Done importing folder archive for Fig01_Synthetic_Spikes
18 Jun 2024 13:55:16,117 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:16,117 INFO : Loading folder archive for Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:16,117 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:16,118 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:16,118 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl] Folder type: Targeted MS
18 Jun 2024 13:55:16,118 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:16,177 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:16,179 INFO : Loading container specific module properties
18 Jun 2024 13:55:16,182 INFO : Done importing container specific module properties
18 Jun 2024 13:55:16,184 INFO : Loading queries
18 Jun 2024 13:55:16,186 INFO : 1 query imported
18 Jun 2024 13:55:16,187 INFO : Done importing queries
18 Jun 2024 13:55:16,188 INFO : Loading etl definitions
18 Jun 2024 13:55:16,190 INFO : Loading wikis
18 Jun 2024 13:55:16,191 INFO : 0 wikis imported
18 Jun 2024 13:55:16,191 INFO : Done importing wikis
18 Jun 2024 13:55:16,193 INFO : Starting Data Class Importer
18 Jun 2024 13:55:16,193 INFO : No types XAR file to process.
18 Jun 2024 13:55:16,193 INFO : Finished Data Class Importer
18 Jun 2024 13:55:16,194 INFO : Starting to copy files
18 Jun 2024 13:55:16,194 INFO : Copied 0 files
18 Jun 2024 13:55:16,194 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:16,198 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:16,198 INFO : No types XAR file to process.
18 Jun 2024 13:55:16,198 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:16,199 INFO : Loading xar
18 Jun 2024 13:55:16,386 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:16,387 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:16,389 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:16,389 DEBUG: Protocol import complete
18 Jun 2024 13:55:16,397 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:16,401 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:16,406 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13284:4c6cbfa8-0b54-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:16,410 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13284:4c6cbf59-0b54-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:16,410 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:16,411 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13284:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:16,412 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13284:4c6cc3ef-0b54-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:16,415 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl/xar/experiments_and_runs.xar.exploded/Run206129/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd into the system
18 Jun 2024 13:55:16,415 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl/xar/experiments_and_runs.xar.exploded/Run206129/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd into the system
18 Jun 2024 13:55:16,415 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl/xar/experiments_and_runs.xar.exploded/Run206129/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip into the system
18 Jun 2024 13:55:16,416 INFO : Starting import from 02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:16,419 INFO : Starting to import Skyline document from 02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:16,420 INFO : Expanding 02_20200128_UBsyntheticsDigestPro.skyd
18 Jun 2024 13:55:16,524 INFO : Expanding 02_20200128_UBsyntheticsDigestPro.sky.view
18 Jun 2024 13:55:16,525 INFO : Expanding 02_20200128_UBsyntheticsDigestPro.sky
18 Jun 2024 13:55:16,531 INFO : 2% Done
18 Jun 2024 13:55:16,565 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:16,565 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:16,721 INFO : 3% Done
18 Jun 2024 13:55:16,721 INFO : Inserting Ub02_H2A_common13_noPropionyl
18 Jun 2024 13:55:16,723 INFO : 6% Done
18 Jun 2024 13:55:16,738 INFO : 10% Done
18 Jun 2024 13:55:16,754 INFO : 15% Done
18 Jun 2024 13:55:16,769 INFO : 18% Done
18 Jun 2024 13:55:16,779 INFO : 23% Done
18 Jun 2024 13:55:16,793 INFO : 25% Done
18 Jun 2024 13:55:16,801 DEBUG: Total peptides inserted: 6
18 Jun 2024 13:55:16,802 INFO : 26% Done
18 Jun 2024 13:55:16,802 INFO : Inserting Ub02_H2A_common13_Propionyl
18 Jun 2024 13:55:16,804 INFO : 29% Done
18 Jun 2024 13:55:16,821 INFO : 32% Done
18 Jun 2024 13:55:16,843 INFO : 39% Done
18 Jun 2024 13:55:16,866 INFO : 42% Done
18 Jun 2024 13:55:16,878 INFO : 46% Done
18 Jun 2024 13:55:16,889 INFO : 48% Done
18 Jun 2024 13:55:16,897 INFO : 51% Done
18 Jun 2024 13:55:16,905 DEBUG: Total peptides inserted: 7
18 Jun 2024 13:55:16,905 INFO : Inserting Ub10_H2B_SSK_noPropionyl
18 Jun 2024 13:55:16,907 INFO : 54% Done
18 Jun 2024 13:55:16,924 INFO : 58% Done
18 Jun 2024 13:55:16,938 INFO : 60% Done
18 Jun 2024 13:55:16,949 INFO : 62% Done
18 Jun 2024 13:55:16,957 INFO : 65% Done
18 Jun 2024 13:55:16,963 DEBUG: Total peptides inserted: 5
18 Jun 2024 13:55:16,964 INFO : 66% Done
18 Jun 2024 13:55:16,964 INFO : Inserting Ub10_H2B_SSK_Propionyl
18 Jun 2024 13:55:16,966 INFO : 68% Done
18 Jun 2024 13:55:16,981 INFO : 72% Done
18 Jun 2024 13:55:16,995 INFO : 75% Done
18 Jun 2024 13:55:17,007 INFO : 78% Done
18 Jun 2024 13:55:17,017 INFO : 80% Done
18 Jun 2024 13:55:17,025 DEBUG: Total peptides inserted: 5
18 Jun 2024 13:55:17,025 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:17,087 INFO : Calculating fold changes
18 Jun 2024 13:55:17,088 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:17,294 INFO : 98% Done
18 Jun 2024 13:55:17,295 INFO : Done calculating fold changes.
18 Jun 2024 13:55:17,295 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:17,300 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:17,308 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:17,315 INFO : Cleaning up temp tables
18 Jun 2024 13:55:17,615 INFO : Completed import of Skyline document from 02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:17,617 INFO : 100% Done
18 Jun 2024 13:55:17,625 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl/xar/experiments_and_runs.xar.exploded/Run206129/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip into the system
18 Jun 2024 13:55:17,628 INFO : Done importing xar
18 Jun 2024 13:55:17,630 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:17,712 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:17,712 INFO : Loading File Browser config
18 Jun 2024 13:55:17,712 INFO : Done importing File Browser config
18 Jun 2024 13:55:17,713 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:17,713 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:17,713 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:17,717 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:17,720 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:17,720 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:17,720 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:17,721 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:17,721 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:17,722 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl and creating symlinks
18 Jun 2024 13:55:17,723 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53
18 Jun 2024 13:55:17,725 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky
18 Jun 2024 13:55:17,727 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky
18 Jun 2024 13:55:17,729 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky.view
18 Jun 2024 13:55:17,730 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.sky.view
18 Jun 2024 13:55:17,732 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd
18 Jun 2024 13:55:17,733 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd
18 Jun 2024 13:55:17,736 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/SupplementaryFiles
18 Jun 2024 13:55:17,738 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx
18 Jun 2024 13:55:17,739 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/SupplementaryFiles/Table01_UbPeptides_v4.xlsx
18 Jun 2024 13:55:17,741 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles
18 Jun 2024 13:55:17,744 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_underiv.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_underiv.raw
18 Jun 2024 13:55:17,745 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_underiv.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_underiv.raw
18 Jun 2024 13:55:17,747 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_pro.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_pro.raw
18 Jun 2024 13:55:17,748 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_pro.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub02_pro.raw
18 Jun 2024 13:55:17,749 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_pro.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_pro.raw
18 Jun 2024 13:55:17,751 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_pro.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_pro.raw
18 Jun 2024 13:55:17,753 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_underiv.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_underiv.raw
18 Jun 2024 13:55:17,754 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_underiv.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/RawFiles/Ub10_underiv.raw
18 Jun 2024 13:55:17,755 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:17,756 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:17,759 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/assaydata
18 Jun 2024 13:55:17,759 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:17,761 DEBUG: Setting filePathRoot on copied run: 02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files
18 Jun 2024 13:55:17,762 DEBUG: Setting dataFileUri on copied data: 02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53.sky.zip
18 Jun 2024 13:55:17,765 DEBUG: Setting dataFileUri on copied data: 02_20200128_UBsyntheticsDigestPro.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl/@files/02_20200128_UBsyntheticsDigestPro_2024-06-12_21-44-53/02_20200128_UBsyntheticsDigestPro.skyd
18 Jun 2024 13:55:17,765 INFO : Done importing folder archive for Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:17,827 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2
18 Jun 2024 13:55:17,827 INFO : Loading folder archive for Fig03_ms2
18 Jun 2024 13:55:17,828 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig03_ms2
18 Jun 2024 13:55:17,829 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:17,829 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2] Folder type: Targeted MS
18 Jun 2024 13:55:17,829 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:17,893 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:17,894 INFO : Loading container specific module properties
18 Jun 2024 13:55:17,897 INFO : Done importing container specific module properties
18 Jun 2024 13:55:17,898 INFO : Loading queries
18 Jun 2024 13:55:17,901 INFO : 1 query imported
18 Jun 2024 13:55:17,901 INFO : Done importing queries
18 Jun 2024 13:55:17,902 INFO : Loading etl definitions
18 Jun 2024 13:55:17,903 INFO : Loading wikis
18 Jun 2024 13:55:17,904 INFO : 0 wikis imported
18 Jun 2024 13:55:17,904 INFO : Done importing wikis
18 Jun 2024 13:55:17,906 INFO : Starting Data Class Importer
18 Jun 2024 13:55:17,906 INFO : No types XAR file to process.
18 Jun 2024 13:55:17,906 INFO : Finished Data Class Importer
18 Jun 2024 13:55:17,907 INFO : Starting to copy files
18 Jun 2024 13:55:17,907 INFO : Copied 0 files
18 Jun 2024 13:55:17,907 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:17,911 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:17,911 INFO : No types XAR file to process.
18 Jun 2024 13:55:17,911 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:17,912 INFO : Loading xar
18 Jun 2024 13:55:18,066 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:18,068 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:18,069 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:18,070 DEBUG: Protocol import complete
18 Jun 2024 13:55:18,077 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:18,081 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:18,087 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13285:830565f7-0b58-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:18,090 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13285:830565c6-0b58-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:18,090 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:18,092 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13285:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:18,093 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13285:8305675f-0b58-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:18,096 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig03_ms2/xar/experiments_and_runs.xar.exploded/Run206133/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd into the system
18 Jun 2024 13:55:18,097 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig03_ms2/xar/experiments_and_runs.xar.exploded/Run206133/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd into the system
18 Jun 2024 13:55:18,097 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig03_ms2/xar/experiments_and_runs.xar.exploded/Run206133/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip into the system
18 Jun 2024 13:55:18,097 INFO : Starting import from 03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,100 INFO : Starting to import Skyline document from 03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,100 INFO : Expanding 03_20210220_HEK_histonesUB.skyd
18 Jun 2024 13:55:18,173 INFO : Expanding 03_20210220_HEK_histonesUB.sky.view
18 Jun 2024 13:55:18,173 INFO : Expanding 03_20210220_HEK_histonesUB.sky
18 Jun 2024 13:55:18,181 INFO : 10% Done
18 Jun 2024 13:55:18,186 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:18,186 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:18,350 INFO : Inserting Ub02_H2A_common13
18 Jun 2024 13:55:18,354 INFO : 24% Done
18 Jun 2024 13:55:18,370 INFO : 39% Done
18 Jun 2024 13:55:18,383 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:18,384 INFO : 42% Done
18 Jun 2024 13:55:18,384 INFO : Inserting Ub09_H2B_SSK
18 Jun 2024 13:55:18,389 INFO : 61% Done
18 Jun 2024 13:55:18,407 INFO : 80% Done
18 Jun 2024 13:55:18,423 DEBUG: Total peptides inserted: 2
18 Jun 2024 13:55:18,425 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:18,487 INFO : Calculating fold changes
18 Jun 2024 13:55:18,487 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:18,527 INFO : 98% Done
18 Jun 2024 13:55:18,527 INFO : Done calculating fold changes.
18 Jun 2024 13:55:18,528 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:18,532 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:18,533 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:18,534 INFO : Cleaning up temp tables
18 Jun 2024 13:55:18,829 INFO : Completed import of Skyline document from 03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,832 INFO : 100% Done
18 Jun 2024 13:55:18,839 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig03_ms2/xar/experiments_and_runs.xar.exploded/Run206133/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip into the system
18 Jun 2024 13:55:18,842 INFO : Done importing xar
18 Jun 2024 13:55:18,843 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:18,928 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:18,928 INFO : Loading File Browser config
18 Jun 2024 13:55:18,928 INFO : Done importing File Browser config
18 Jun 2024 13:55:18,930 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:18,930 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:18,930 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:18,935 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:18,937 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:18,937 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:18,938 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:18,938 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:18,938 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:18,939 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2 and creating symlinks
18 Jun 2024 13:55:18,941 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles
18 Jun 2024 13:55:18,942 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK.svg to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK.svg
18 Jun 2024 13:55:18,943 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK.svg targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK.svg
18 Jun 2024 13:55:18,945 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_KggTESHHK_scan7363.xlsx to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_KggTESHHK_scan7363.xlsx
18 Jun 2024 13:55:18,946 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_KggTESHHK_scan7363.xlsx targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_KggTESHHK_scan7363.xlsx
18 Jun 2024 13:55:18,948 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK.svg to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK.svg
18 Jun 2024 13:55:18,949 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK.svg targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK.svg
18 Jun 2024 13:55:18,950 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK_Data.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK_Data.csv
18 Jun 2024 13:55:18,951 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK_Data.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/KTESHHK_Data.csv
18 Jun 2024 13:55:18,953 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_AVTKggYTSSK_scan20678.xlsx to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_AVTKggYTSSK_scan20678.xlsx
18 Jun 2024 13:55:18,954 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_AVTKggYTSSK_scan20678.xlsx targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/MS2_points_AVTKggYTSSK_scan20678.xlsx
18 Jun 2024 13:55:18,955 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK_Data.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK_Data.csv
18 Jun 2024 13:55:18,956 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK_Data.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/SupplementaryFiles/AVTKYTSSK_Data.csv
18 Jun 2024 13:55:18,958 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles
18 Jun 2024 13:55:18,959 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_pro.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_pro.raw
18 Jun 2024 13:55:18,961 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_pro.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_pro.raw
18 Jun 2024 13:55:18,962 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_pro.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_pro.raw
18 Jun 2024 13:55:18,963 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_pro.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_pro.raw
18 Jun 2024 13:55:18,965 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_ctrl.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_ctrl.raw
18 Jun 2024 13:55:18,966 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_ctrl.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_plusNaB_ctrl.raw
18 Jun 2024 13:55:18,968 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_ctrl.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_ctrl.raw
18 Jun 2024 13:55:18,968 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_ctrl.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/RawFiles/HEK_minusNaB_ctrl.raw
18 Jun 2024 13:55:18,969 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45
18 Jun 2024 13:55:18,970 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd
18 Jun 2024 13:55:18,971 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd
18 Jun 2024 13:55:18,973 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky.view
18 Jun 2024 13:55:18,974 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky.view
18 Jun 2024 13:55:18,975 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky
18 Jun 2024 13:55:18,976 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.sky
18 Jun 2024 13:55:18,978 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,979 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,979 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2
18 Jun 2024 13:55:18,981 DEBUG: Setting filePathRoot on copied run: 03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files
18 Jun 2024 13:55:18,983 DEBUG: Setting dataFileUri on copied data: 03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45.sky.zip
18 Jun 2024 13:55:18,985 DEBUG: Setting dataFileUri on copied data: 03_20210220_HEK_histonesUB.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2/@files/03_20210220_HEK_histonesUB_2024-06-12_22-15-45/03_20210220_HEK_histonesUB.skyd
18 Jun 2024 13:55:18,985 INFO : Done importing folder archive for Fig03_ms2
18 Jun 2024 13:55:19,048 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes
18 Jun 2024 13:55:19,048 INFO : Loading folder archive for Fig04_Isotopes
18 Jun 2024 13:55:19,048 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig04_Isotopes
18 Jun 2024 13:55:19,049 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:19,049 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes] Folder type: Targeted MS
18 Jun 2024 13:55:19,049 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:19,118 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:19,119 INFO : Loading container specific module properties
18 Jun 2024 13:55:19,122 INFO : Done importing container specific module properties
18 Jun 2024 13:55:19,123 INFO : Loading queries
18 Jun 2024 13:55:19,126 INFO : 1 query imported
18 Jun 2024 13:55:19,126 INFO : Done importing queries
18 Jun 2024 13:55:19,127 INFO : Loading etl definitions
18 Jun 2024 13:55:19,128 INFO : Loading wikis
18 Jun 2024 13:55:19,130 INFO : 0 wikis imported
18 Jun 2024 13:55:19,130 INFO : Done importing wikis
18 Jun 2024 13:55:19,131 INFO : Starting Data Class Importer
18 Jun 2024 13:55:19,131 INFO : No types XAR file to process.
18 Jun 2024 13:55:19,131 INFO : Finished Data Class Importer
18 Jun 2024 13:55:19,132 INFO : Starting to copy files
18 Jun 2024 13:55:19,132 INFO : Copied 0 files
18 Jun 2024 13:55:19,132 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:19,136 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:19,137 INFO : No types XAR file to process.
18 Jun 2024 13:55:19,137 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:19,138 INFO : Loading xar
18 Jun 2024 13:55:19,170 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:19,172 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:19,174 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:19,174 DEBUG: Protocol import complete
18 Jun 2024 13:55:19,182 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:19,187 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:19,192 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13286:d1f0cd03-0faa-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:19,195 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13286:d1f0ccc5-0faa-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:19,195 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:19,197 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13286:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:19,198 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13286:d1f0cf66-0faa-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:19,201 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig04_Isotopes/xar/experiments_and_runs.xar.exploded/Run206841/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd into the system
18 Jun 2024 13:55:19,202 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig04_Isotopes/xar/experiments_and_runs.xar.exploded/Run206841/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd into the system
18 Jun 2024 13:55:19,202 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig04_Isotopes/xar/experiments_and_runs.xar.exploded/Run206841/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip into the system
18 Jun 2024 13:55:19,202 INFO : Starting import from 20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:19,205 INFO : Starting to import Skyline document from 20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:19,206 INFO : Expanding 20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd
18 Jun 2024 13:55:19,219 INFO : Expanding 20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky.view
18 Jun 2024 13:55:19,220 INFO : Expanding 20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky
18 Jun 2024 13:55:19,226 INFO : 2% Done
18 Jun 2024 13:55:19,266 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:19,266 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:19,463 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:19,474 INFO : 12% Done
18 Jun 2024 13:55:19,516 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,516 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:19,525 INFO : 21% Done
18 Jun 2024 13:55:19,559 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,559 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:19,566 INFO : 28% Done
18 Jun 2024 13:55:19,598 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,598 INFO : Inserting H2A_specific_common4_HUMAN
18 Jun 2024 13:55:19,607 INFO : 36% Done
18 Jun 2024 13:55:19,644 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,645 INFO : Inserting H2AX_specific_HUMAN_P16104
18 Jun 2024 13:55:19,653 INFO : 42% Done
18 Jun 2024 13:55:19,682 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,682 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:19,694 INFO : 52% Done
18 Jun 2024 13:55:19,738 INFO : 59% Done
18 Jun 2024 13:55:19,773 INFO : 68% Done
18 Jun 2024 13:55:19,809 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:19,809 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:19,817 INFO : 74% Done
18 Jun 2024 13:55:19,845 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,845 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:19,853 INFO : 80% Done
18 Jun 2024 13:55:19,879 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:19,881 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:19,948 INFO : Calculating fold changes
18 Jun 2024 13:55:19,948 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:20,083 INFO : 98% Done
18 Jun 2024 13:55:20,083 INFO : Done calculating fold changes.
18 Jun 2024 13:55:20,084 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:20,090 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:20,099 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:20,102 INFO : Cleaning up temp tables
18 Jun 2024 13:55:20,408 INFO : Completed import of Skyline document from 20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:20,411 INFO : 100% Done
18 Jun 2024 13:55:20,422 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig04_Isotopes/xar/experiments_and_runs.xar.exploded/Run206841/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip into the system
18 Jun 2024 13:55:20,427 INFO : Done importing xar
18 Jun 2024 13:55:20,428 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:20,524 INFO : Done importing 3 page(s) with 5 webpart(s)
18 Jun 2024 13:55:20,524 INFO : Loading File Browser config
18 Jun 2024 13:55:20,524 INFO : Done importing File Browser config
18 Jun 2024 13:55:20,526 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:20,526 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:20,526 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:20,531 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:20,533 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:20,533 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:20,534 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:20,534 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:20,534 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:20,535 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes and creating symlinks
18 Jun 2024 13:55:20,538 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles
18 Jun 2024 13:55:20,540 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ19_h100_l00_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ19_h100_l00_w2m.raw
18 Jun 2024 13:55:20,541 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ19_h100_l00_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ19_h100_l00_w2m.raw
18 Jun 2024 13:55:20,543 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ04_h50_l50_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ04_h50_l50_w2m.raw
18 Jun 2024 13:55:20,544 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ04_h50_l50_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ04_h50_l50_w2m.raw
18 Jun 2024 13:55:20,546 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ03_h75_l25_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ03_h75_l25_w2m.raw
18 Jun 2024 13:55:20,547 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ03_h75_l25_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ03_h75_l25_w2m.raw
18 Jun 2024 13:55:20,549 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ02_h90_l10_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ02_h90_l10_w2m.raw
18 Jun 2024 13:55:20,550 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ02_h90_l10_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ02_h90_l10_w2m.raw
18 Jun 2024 13:55:20,552 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ20_h00_l100_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ20_h00_l100_w2m.raw
18 Jun 2024 13:55:20,553 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ20_h00_l100_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ20_h00_l100_w2m.raw
18 Jun 2024 13:55:20,554 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ05_h25_l75_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ05_h25_l75_w2m.raw
18 Jun 2024 13:55:20,555 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ05_h25_l75_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ05_h25_l75_w2m.raw
18 Jun 2024 13:55:20,557 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ06_h10_l90_w2m.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ06_h10_l90_w2m.raw
18 Jun 2024 13:55:20,558 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ06_h10_l90_w2m.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/RawFiles/IQ06_h10_l90_w2m.raw
18 Jun 2024 13:55:20,559 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:20,560 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:20,561 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43
18 Jun 2024 13:55:20,562 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd
18 Jun 2024 13:55:20,563 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd
18 Jun 2024 13:55:20,565 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky
18 Jun 2024 13:55:20,566 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky
18 Jun 2024 13:55:20,568 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky.view
18 Jun 2024 13:55:20,568 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.sky.view
18 Jun 2024 13:55:20,570 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/assaydata
18 Jun 2024 13:55:20,571 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes
18 Jun 2024 13:55:20,572 DEBUG: Setting filePathRoot on copied run: 20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files
18 Jun 2024 13:55:20,574 DEBUG: Setting dataFileUri on copied data: 20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43.sky.zip
18 Jun 2024 13:55:20,576 DEBUG: Setting dataFileUri on copied data: 20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes/@files/20200625_QE_pr0pr5_IsoQuant_w2m_v2_2024-06-18_10-17-43/20200625_QE_pr0pr5_IsoQuant_w2m_v2.skyd
18 Jun 2024 13:55:20,576 INFO : Done importing folder archive for Fig04_Isotopes
18 Jun 2024 13:55:20,638 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike
18 Jun 2024 13:55:20,638 INFO : Loading folder archive for Fig05_H2B_peptide_spike
18 Jun 2024 13:55:20,638 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike
18 Jun 2024 13:55:20,640 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:20,640 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike] Folder type: Targeted MS
18 Jun 2024 13:55:20,640 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:20,713 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:20,715 INFO : Loading container specific module properties
18 Jun 2024 13:55:20,718 INFO : Done importing container specific module properties
18 Jun 2024 13:55:20,719 INFO : Loading queries
18 Jun 2024 13:55:20,723 INFO : 1 query imported
18 Jun 2024 13:55:20,723 INFO : Done importing queries
18 Jun 2024 13:55:20,724 INFO : Loading etl definitions
18 Jun 2024 13:55:20,725 INFO : Loading wikis
18 Jun 2024 13:55:20,726 INFO : 0 wikis imported
18 Jun 2024 13:55:20,726 INFO : Done importing wikis
18 Jun 2024 13:55:20,727 INFO : Starting Data Class Importer
18 Jun 2024 13:55:20,728 INFO : No types XAR file to process.
18 Jun 2024 13:55:20,728 INFO : Finished Data Class Importer
18 Jun 2024 13:55:20,728 INFO : Starting to copy files
18 Jun 2024 13:55:20,728 INFO : Copied 0 files
18 Jun 2024 13:55:20,728 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:20,733 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:20,733 INFO : No types XAR file to process.
18 Jun 2024 13:55:20,733 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:20,734 INFO : Loading xar
18 Jun 2024 13:55:21,102 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:21,104 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:21,105 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:21,106 DEBUG: Protocol import complete
18 Jun 2024 13:55:21,113 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:21,118 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:21,123 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13287:410e16b1-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,127 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13287:410e167b-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,127 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:21,128 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:21,129 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13287:410e17cf-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,132 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:21,136 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13287:410e1c14-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,139 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13287:410e1bde-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,139 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:21,140 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13287:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:21,141 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13287:410e1d28-0fac-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:21,147 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206843/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:21,147 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206843/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:21,147 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206843/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip into the system
18 Jun 2024 13:55:21,148 INFO : Starting import from sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:21,150 INFO : Starting to import Skyline document from sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:21,151 INFO : Expanding sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:21,249 INFO : Expanding sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:21,249 INFO : Expanding sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:21,255 INFO : 7% Done
18 Jun 2024 13:55:21,280 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:21,281 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:21,475 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:21,486 INFO : 39% Done
18 Jun 2024 13:55:21,546 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:21,546 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:21,554 INFO : 62% Done
18 Jun 2024 13:55:21,598 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:21,598 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:21,609 INFO : 80% Done
18 Jun 2024 13:55:21,648 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:21,649 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:21,711 INFO : Calculating fold changes
18 Jun 2024 13:55:21,711 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:21,757 INFO : 98% Done
18 Jun 2024 13:55:21,757 INFO : Done calculating fold changes.
18 Jun 2024 13:55:21,758 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:21,762 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:21,767 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:21,768 INFO : Cleaning up temp tables
18 Jun 2024 13:55:22,062 INFO : Completed import of Skyline document from sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:22,064 INFO : 100% Done
18 Jun 2024 13:55:22,071 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206843/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip into the system
18 Jun 2024 13:55:22,071 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206844/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:22,071 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206844/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:22,071 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206844/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip into the system
18 Jun 2024 13:55:22,072 INFO : Starting import from sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:22,073 INFO : Starting to import Skyline document from sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:22,074 INFO : Expanding sim_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:22,189 INFO : Expanding sim_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:22,190 INFO : Expanding sim_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:22,196 INFO : 8% Done
18 Jun 2024 13:55:22,216 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:22,216 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:22,406 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:22,419 INFO : 42% Done
18 Jun 2024 13:55:22,482 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:22,482 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:22,490 INFO : 66% Done
18 Jun 2024 13:55:22,536 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:22,536 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:22,541 INFO : 80% Done
18 Jun 2024 13:55:22,571 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:22,572 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:22,635 INFO : Calculating fold changes
18 Jun 2024 13:55:22,635 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:22,683 INFO : 98% Done
18 Jun 2024 13:55:22,683 INFO : Done calculating fold changes.
18 Jun 2024 13:55:22,684 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:22,688 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:22,692 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:22,694 INFO : Cleaning up temp tables
18 Jun 2024 13:55:22,991 INFO : Completed import of Skyline document from sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:22,993 INFO : 100% Done
18 Jun 2024 13:55:23,000 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike/xar/experiments_and_runs.xar.exploded/Run206844/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip into the system
18 Jun 2024 13:55:23,006 INFO : Done importing xar
18 Jun 2024 13:55:23,007 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:23,087 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:23,087 INFO : Loading File Browser config
18 Jun 2024 13:55:23,087 INFO : Done importing File Browser config
18 Jun 2024 13:55:23,088 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:23,088 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:23,088 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:23,093 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:23,094 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:23,095 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:23,095 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:23,095 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:23,095 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:23,096 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike and creating symlinks
18 Jun 2024 13:55:23,099 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles
18 Jun 2024 13:55:23,101 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_histoneUb_sim_syntheticH2B_QEHF_20200802.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_histoneUb_sim_syntheticH2B_QEHF_20200802.R
18 Jun 2024 13:55:23,102 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_histoneUb_sim_syntheticH2B_QEHF_20200802.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_histoneUb_sim_syntheticH2B_QEHF_20200802.R
18 Jun 2024 13:55:23,104 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_SAK_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_SAK_version01.csv
18 Jun 2024 13:55:23,105 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_SAK_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_SAK_version01.csv
18 Jun 2024 13:55:23,107 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_version01.csv
18 Jun 2024 13:55:23,108 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/SSK_version01.csv
18 Jun 2024 13:55:23,110 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_SSKonly_histoneUb_sim_syntheticH2B_QEHF_20200802.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_SSKonly_histoneUb_sim_syntheticH2B_QEHF_20200802.R
18 Jun 2024 13:55:23,111 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_SSKonly_histoneUb_sim_syntheticH2B_QEHF_20200802.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/SupplementalFiles/skyline_analysis_SSKonly_histoneUb_sim_syntheticH2B_QEHF_20200802.R
18 Jun 2024 13:55:23,113 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:23,114 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:23,116 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles
18 Jun 2024 13:55:23,118 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK
18 Jun 2024 13:55:23,120 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim01_00_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim01_00_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,121 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim01_00_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim01_00_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,123 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim04_01_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim04_01_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,125 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim04_01_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim04_01_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,126 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim06_02_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim06_02_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,128 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim06_02_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim06_02_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,129 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim07_04_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim07_04_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,131 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim07_04_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim07_04_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,133 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim09_08_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim09_08_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,134 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim09_08_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim09_08_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,136 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim12_16_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim12_16_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,137 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim12_16_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim12_16_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,138 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim10_08_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim10_08_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,140 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim10_08_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim10_08_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,141 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim13_32_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim13_32_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,143 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim13_32_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim13_32_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,145 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim08_04_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim08_04_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,146 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim08_04_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim08_04_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,148 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim05_02_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim05_02_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,149 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim05_02_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim05_02_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,150 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim14_32_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim14_32_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,152 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim14_32_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim14_32_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,154 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim_master1+2_inj5ul.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim_master1+2_inj5ul.raw
18 Jun 2024 13:55:23,155 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim_master1+2_inj5ul.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim_master1+2_inj5ul.raw
18 Jun 2024 13:55:23,157 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim11_16_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim11_16_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,158 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim11_16_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim11_16_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,160 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim03_01_mixL_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim03_01_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,161 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim03_01_mixL_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim03_01_mixL_SSK_SAK.raw
18 Jun 2024 13:55:23,163 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim02_00_mixH_SSK_SAK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim02_00_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,164 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim02_00_mixH_SSK_SAK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_SAK/Sim02_00_mixH_SSK_SAK.raw
18 Jun 2024 13:55:23,166 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only
18 Jun 2024 13:55:23,168 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim16_00_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim16_00_mixH_SSK.raw
18 Jun 2024 13:55:23,169 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim16_00_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim16_00_mixH_SSK.raw
18 Jun 2024 13:55:23,170 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim25_16_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim25_16_mixL_SSK.raw
18 Jun 2024 13:55:23,172 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim25_16_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim25_16_mixL_SSK.raw
18 Jun 2024 13:55:23,174 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim15_00_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim15_00_mixL_SSK.raw
18 Jun 2024 13:55:23,176 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim15_00_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim15_00_mixL_SSK.raw
18 Jun 2024 13:55:23,177 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim27_32_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim27_32_mixL_SSK.raw
18 Jun 2024 13:55:23,179 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim27_32_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim27_32_mixL_SSK.raw
18 Jun 2024 13:55:23,181 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim18_01_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim18_01_mixH_SSK.raw
18 Jun 2024 13:55:23,182 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim18_01_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim18_01_mixH_SSK.raw
18 Jun 2024 13:55:23,183 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim23_08_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim23_08_mixL_SSK.raw
18 Jun 2024 13:55:23,184 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim23_08_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim23_08_mixL_SSK.raw
18 Jun 2024 13:55:23,191 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim22_04_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim22_04_mixH_SSK.raw
18 Jun 2024 13:55:23,192 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim22_04_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim22_04_mixH_SSK.raw
18 Jun 2024 13:55:23,194 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim21_04_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim21_04_mixL_SSK.raw
18 Jun 2024 13:55:23,195 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim21_04_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim21_04_mixL_SSK.raw
18 Jun 2024 13:55:23,197 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim20_02_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim20_02_mixH_SSK.raw
18 Jun 2024 13:55:23,197 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim20_02_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim20_02_mixH_SSK.raw
18 Jun 2024 13:55:23,199 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim24_08_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim24_08_mixH_SSK.raw
18 Jun 2024 13:55:23,200 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim24_08_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim24_08_mixH_SSK.raw
18 Jun 2024 13:55:23,202 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim19_02_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim19_02_mixL_SSK.raw
18 Jun 2024 13:55:23,203 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim19_02_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim19_02_mixL_SSK.raw
18 Jun 2024 13:55:23,205 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim26_16_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim26_16_mixH_SSK.raw
18 Jun 2024 13:55:23,206 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim26_16_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim26_16_mixH_SSK.raw
18 Jun 2024 13:55:23,208 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim28_32_mixH_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim28_32_mixH_SSK.raw
18 Jun 2024 13:55:23,209 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim28_32_mixH_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim28_32_mixH_SSK.raw
18 Jun 2024 13:55:23,211 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim_master3+4_inj5ul.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim_master3+4_inj5ul.raw
18 Jun 2024 13:55:23,212 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim_master3+4_inj5ul.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim_master3+4_inj5ul.raw
18 Jun 2024 13:55:23,213 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim17_01_mixL_SSK.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim17_01_mixL_SSK.raw
18 Jun 2024 13:55:23,214 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim17_01_mixL_SSK.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/RawFiles/SSK_only/Sim17_01_mixL_SSK.raw
18 Jun 2024 13:55:23,216 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:23,217 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:23,218 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19
18 Jun 2024 13:55:23,219 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,220 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,222 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:23,223 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:23,225 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:23,226 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:23,228 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02
18 Jun 2024 13:55:23,230 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:23,231 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky
18 Jun 2024 13:55:23,232 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,233 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,235 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:23,236 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.sky.view
18 Jun 2024 13:55:23,238 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/assaydata
18 Jun 2024 13:55:23,238 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike
18 Jun 2024 13:55:23,240 DEBUG: Setting filePathRoot on copied run: sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files
18 Jun 2024 13:55:23,242 DEBUG: Setting dataFileUri on copied data: sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19.sky.zip
18 Jun 2024 13:55:23,244 DEBUG: Setting dataFileUri on copied data: sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-26-19/sim_ssk_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,245 DEBUG: Setting filePathRoot on copied run: sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files
18 Jun 2024 13:55:23,246 DEBUG: Setting dataFileUri on copied data: sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02.sky.zip
18 Jun 2024 13:55:23,248 DEBUG: Setting dataFileUri on copied data: sim_h2b_synthetic_qehf_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike/@files/sim_h2b_synthetic_qehf_pr0pr5_v03_2024-06-18_10-27-02/sim_h2b_synthetic_qehf_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,248 INFO : Done importing folder archive for Fig05_H2B_peptide_spike
18 Jun 2024 13:55:23,307 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors
18 Jun 2024 13:55:23,308 INFO : Loading folder archive for Fig06_inhibitors
18 Jun 2024 13:55:23,308 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors
18 Jun 2024 13:55:23,309 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:23,309 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors] Folder type: Targeted MS
18 Jun 2024 13:55:23,309 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:23,375 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:23,376 INFO : Loading container specific module properties
18 Jun 2024 13:55:23,380 INFO : Done importing container specific module properties
18 Jun 2024 13:55:23,381 INFO : Loading queries
18 Jun 2024 13:55:23,384 INFO : 1 query imported
18 Jun 2024 13:55:23,384 INFO : Done importing queries
18 Jun 2024 13:55:23,385 INFO : Loading etl definitions
18 Jun 2024 13:55:23,386 INFO : Loading wikis
18 Jun 2024 13:55:23,387 INFO : 0 wikis imported
18 Jun 2024 13:55:23,387 INFO : Done importing wikis
18 Jun 2024 13:55:23,389 INFO : Starting Data Class Importer
18 Jun 2024 13:55:23,389 INFO : No types XAR file to process.
18 Jun 2024 13:55:23,389 INFO : Finished Data Class Importer
18 Jun 2024 13:55:23,390 INFO : Starting to copy files
18 Jun 2024 13:55:23,390 INFO : Copied 0 files
18 Jun 2024 13:55:23,390 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:23,394 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:23,394 INFO : No types XAR file to process.
18 Jun 2024 13:55:23,394 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:23,395 INFO : Loading xar
18 Jun 2024 13:55:23,399 INFO : Done importing xar
18 Jun 2024 13:55:23,400 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:23,461 INFO : Done importing 3 page(s) with 4 webpart(s)
18 Jun 2024 13:55:23,461 INFO : Loading File Browser config
18 Jun 2024 13:55:23,461 INFO : Done importing File Browser config
18 Jun 2024 13:55:23,462 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:23,462 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:23,462 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:23,467 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:23,469 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:23,469 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:23,470 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:23,470 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:23,470 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:23,471 INFO : Loading subfolders and container tabs
18 Jun 2024 13:55:23,526 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING
18 Jun 2024 13:55:23,526 INFO : Loading folder archive for 1_sgRING
18 Jun 2024 13:55:23,526 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING
18 Jun 2024 13:55:23,527 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:23,527 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING] Folder type: Targeted MS
18 Jun 2024 13:55:23,527 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:23,581 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:23,582 INFO : Loading container specific module properties
18 Jun 2024 13:55:23,585 INFO : Done importing container specific module properties
18 Jun 2024 13:55:23,586 INFO : Loading queries
18 Jun 2024 13:55:23,589 INFO : 1 query imported
18 Jun 2024 13:55:23,589 INFO : Done importing queries
18 Jun 2024 13:55:23,590 INFO : Loading etl definitions
18 Jun 2024 13:55:23,591 INFO : Loading wikis
18 Jun 2024 13:55:23,592 INFO : 0 wikis imported
18 Jun 2024 13:55:23,592 INFO : Done importing wikis
18 Jun 2024 13:55:23,593 INFO : Starting Data Class Importer
18 Jun 2024 13:55:23,593 INFO : No types XAR file to process.
18 Jun 2024 13:55:23,593 INFO : Finished Data Class Importer
18 Jun 2024 13:55:23,594 INFO : Starting to copy files
18 Jun 2024 13:55:23,594 INFO : Copied 0 files
18 Jun 2024 13:55:23,594 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:23,599 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:23,599 INFO : No types XAR file to process.
18 Jun 2024 13:55:23,599 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:23,600 INFO : Loading xar
18 Jun 2024 13:55:23,635 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:23,637 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:23,639 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:23,639 DEBUG: Protocol import complete
18 Jun 2024 13:55:23,646 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:23,651 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:23,656 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13289:0e6760a8-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:23,659 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13289:0e676072-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:23,659 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:23,661 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13289:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:23,661 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13289:0e6762c1-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:23,665 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING/xar/experiments_and_runs.xar.exploded/Run206847/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:23,665 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING/xar/experiments_and_runs.xar.exploded/Run206847/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:23,665 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING/xar/experiments_and_runs.xar.exploded/Run206847/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip into the system
18 Jun 2024 13:55:23,666 INFO : Starting import from 20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:23,668 INFO : Starting to import Skyline document from 20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:23,669 INFO : Expanding 20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:23,684 INFO : Expanding 20210304_ExptT_sgRING_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:23,684 INFO : Expanding 20210304_ExptT_sgRING_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:23,690 INFO : 2% Done
18 Jun 2024 13:55:23,720 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:23,721 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:23,915 INFO : 3% Done
18 Jun 2024 13:55:23,915 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:23,923 INFO : 14% Done
18 Jun 2024 13:55:23,965 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:23,966 INFO : 15% Done
18 Jun 2024 13:55:23,966 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:23,974 INFO : 25% Done
18 Jun 2024 13:55:24,012 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:24,012 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:24,018 INFO : 34% Done
18 Jun 2024 13:55:24,052 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:24,052 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:24,060 INFO : 46% Done
18 Jun 2024 13:55:24,105 INFO : 54% Done
18 Jun 2024 13:55:24,141 INFO : 65% Done
18 Jun 2024 13:55:24,178 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:24,178 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:24,184 INFO : 73% Done
18 Jun 2024 13:55:24,213 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:24,213 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:24,218 INFO : 80% Done
18 Jun 2024 13:55:24,246 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:24,247 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:24,311 INFO : Calculating fold changes
18 Jun 2024 13:55:24,311 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:24,435 INFO : 98% Done
18 Jun 2024 13:55:24,435 INFO : Done calculating fold changes.
18 Jun 2024 13:55:24,436 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:24,441 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:24,449 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:24,452 INFO : Cleaning up temp tables
18 Jun 2024 13:55:24,761 INFO : Completed import of Skyline document from 20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:24,764 INFO : 100% Done
18 Jun 2024 13:55:24,771 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING/xar/experiments_and_runs.xar.exploded/Run206847/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip into the system
18 Jun 2024 13:55:24,774 INFO : Done importing xar
18 Jun 2024 13:55:24,775 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:24,858 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:24,858 INFO : Loading File Browser config
18 Jun 2024 13:55:24,858 INFO : Done importing File Browser config
18 Jun 2024 13:55:24,859 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:24,860 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:24,860 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:24,864 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:24,866 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:24,866 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:24,867 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:24,867 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:24,867 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:24,868 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING and creating symlinks
18 Jun 2024 13:55:24,871 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles
18 Jun 2024 13:55:24,872 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_20210304_QE_rerunsAug2020_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_20210304_QE_rerunsAug2020_version01.csv
18 Jun 2024 13:55:24,874 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_20210304_QE_rerunsAug2020_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_20210304_QE_rerunsAug2020_version01.csv
18 Jun 2024 13:55:24,876 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptT_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptT_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:24,877 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptT_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptT_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:24,878 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_sgRING1ab_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_sgRING1ab_6x4p.pdf
18 Jun 2024 13:55:24,879 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_sgRING1ab_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/SupplementaryFiles/ExptT_sgRING1ab_6x4p.pdf
18 Jun 2024 13:55:24,881 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:24,882 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:24,884 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles
18 Jun 2024 13:55:24,885 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_1.raw
18 Jun 2024 13:55:24,886 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_1.raw
18 Jun 2024 13:55:24,888 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_2.raw
18 Jun 2024 13:55:24,889 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_2.raw
18 Jun 2024 13:55:24,891 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_2.raw
18 Jun 2024 13:55:24,892 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_2.raw
18 Jun 2024 13:55:24,893 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_1.raw
18 Jun 2024 13:55:24,894 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_1.raw
18 Jun 2024 13:55:24,896 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_1.raw
18 Jun 2024 13:55:24,896 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_parental_1.raw
18 Jun 2024 13:55:24,898 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_2.raw
18 Jun 2024 13:55:24,899 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_sgRING1_2.raw
18 Jun 2024 13:55:24,901 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_2.raw
18 Jun 2024 13:55:24,902 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/L_parental_2.raw
18 Jun 2024 13:55:24,904 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_1.raw
18 Jun 2024 13:55:24,905 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/RawFiles/H_sgRING1_1.raw
18 Jun 2024 13:55:24,907 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07
18 Jun 2024 13:55:24,908 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:24,910 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:24,911 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:24,912 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:24,913 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:24,914 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:24,916 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/assaydata
18 Jun 2024 13:55:24,916 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING
18 Jun 2024 13:55:24,918 DEBUG: Setting filePathRoot on copied run: 20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files
18 Jun 2024 13:55:24,919 DEBUG: Setting dataFileUri on copied data: 20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07.sky.zip
18 Jun 2024 13:55:24,922 DEBUG: Setting dataFileUri on copied data: 20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING/@files/20210304_ExptT_sgRING_qe_pr0pr5_v03_2024-06-18_10-33-07/20210304_ExptT_sgRING_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:24,922 INFO : Done importing folder archive for 1_sgRING
18 Jun 2024 13:55:24,976 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano
18 Jun 2024 13:55:24,976 INFO : Loading folder archive for 2_pano
18 Jun 2024 13:55:24,976 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano
18 Jun 2024 13:55:24,977 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:24,977 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano] Folder type: Targeted MS
18 Jun 2024 13:55:24,977 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:25,037 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:25,038 INFO : Loading container specific module properties
18 Jun 2024 13:55:25,042 INFO : Done importing container specific module properties
18 Jun 2024 13:55:25,043 INFO : Loading queries
18 Jun 2024 13:55:25,046 INFO : 1 query imported
18 Jun 2024 13:55:25,046 INFO : Done importing queries
18 Jun 2024 13:55:25,047 INFO : Loading etl definitions
18 Jun 2024 13:55:25,048 INFO : Loading wikis
18 Jun 2024 13:55:25,049 INFO : 0 wikis imported
18 Jun 2024 13:55:25,049 INFO : Done importing wikis
18 Jun 2024 13:55:25,050 INFO : Starting Data Class Importer
18 Jun 2024 13:55:25,050 INFO : No types XAR file to process.
18 Jun 2024 13:55:25,050 INFO : Finished Data Class Importer
18 Jun 2024 13:55:25,051 INFO : Starting to copy files
18 Jun 2024 13:55:25,051 INFO : Copied 0 files
18 Jun 2024 13:55:25,051 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:25,055 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:25,055 INFO : No types XAR file to process.
18 Jun 2024 13:55:25,055 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:25,056 INFO : Loading xar
18 Jun 2024 13:55:25,125 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:25,127 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:25,128 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:25,129 DEBUG: Protocol import complete
18 Jun 2024 13:55:25,136 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:25,141 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:25,146 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13290:fdfacc7e-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:25,149 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13290:0e676d83-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:25,149 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:25,151 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13290:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:25,151 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13290:fdfacecd-0fad-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:25,155 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano/xar/experiments_and_runs.xar.exploded/Run206849/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:25,155 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano/xar/experiments_and_runs.xar.exploded/Run206849/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:25,155 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano/xar/experiments_and_runs.xar.exploded/Run206849/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip into the system
18 Jun 2024 13:55:25,156 INFO : Starting import from 20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:25,158 INFO : Starting to import Skyline document from 20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:25,159 INFO : Expanding 20210304_ExptF_pano_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:25,190 INFO : Expanding 20210304_ExptF_pano_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:25,190 INFO : Expanding 20210304_ExptF_pano_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:25,199 INFO : 2% Done
18 Jun 2024 13:55:25,285 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:25,286 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:25,488 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:25,507 INFO : 14% Done
18 Jun 2024 13:55:25,604 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:25,604 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:25,621 INFO : 25% Done
18 Jun 2024 13:55:25,707 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:25,707 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:25,719 INFO : 34% Done
18 Jun 2024 13:55:25,792 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:25,792 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:25,810 INFO : 46% Done
18 Jun 2024 13:55:25,913 INFO : 54% Done
18 Jun 2024 13:55:25,998 INFO : 65% Done
18 Jun 2024 13:55:26,086 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:26,086 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:26,097 INFO : 73% Done
18 Jun 2024 13:55:26,164 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:26,164 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:26,174 INFO : 80% Done
18 Jun 2024 13:55:26,243 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:26,246 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:26,308 INFO : Calculating fold changes
18 Jun 2024 13:55:26,308 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:26,477 INFO : 98% Done
18 Jun 2024 13:55:26,477 INFO : Done calculating fold changes.
18 Jun 2024 13:55:26,478 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:26,483 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:26,498 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:26,504 INFO : Cleaning up temp tables
18 Jun 2024 13:55:26,809 INFO : Completed import of Skyline document from 20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:26,811 INFO : 100% Done
18 Jun 2024 13:55:26,819 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano/xar/experiments_and_runs.xar.exploded/Run206849/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip into the system
18 Jun 2024 13:55:26,823 INFO : Done importing xar
18 Jun 2024 13:55:26,824 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:26,903 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:26,903 INFO : Loading File Browser config
18 Jun 2024 13:55:26,903 INFO : Done importing File Browser config
18 Jun 2024 13:55:26,904 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:26,904 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:26,904 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:26,909 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:26,910 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:26,911 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:26,911 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:26,912 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:26,912 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:26,912 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano and creating symlinks
18 Jun 2024 13:55:26,916 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles
18 Jun 2024 13:55:26,917 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptF_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptF_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:26,919 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptF_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptF_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:26,921 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_Pano_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_Pano_6x4p.pdf
18 Jun 2024 13:55:26,921 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_Pano_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_Pano_6x4p.pdf
18 Jun 2024 13:55:26,925 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_pano_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_pano_version01.csv
18 Jun 2024 13:55:26,926 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_pano_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/SupplementaryFiles/ExptF_pano_version01.csv
18 Jun 2024 13:55:26,928 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles
18 Jun 2024 13:55:26,930 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F13_pano_24h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F13_pano_24h_1e1_r1.raw
18 Jun 2024 13:55:26,931 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F13_pano_24h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F13_pano_24h_1e1_r1.raw
18 Jun 2024 13:55:26,933 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F11_pano_24h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F11_pano_24h_1e0_r3.raw
18 Jun 2024 13:55:26,934 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F11_pano_24h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F11_pano_24h_1e0_r3.raw
18 Jun 2024 13:55:26,935 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F10_pano_24h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F10_pano_24h_1e0_r2.raw
18 Jun 2024 13:55:26,936 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F10_pano_24h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F10_pano_24h_1e0_r2.raw
18 Jun 2024 13:55:26,938 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F13_pano_24h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F13_pano_24h_1e1_r1.raw
18 Jun 2024 13:55:26,939 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F13_pano_24h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F13_pano_24h_1e1_r1.raw
18 Jun 2024 13:55:26,941 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F14_pano_24h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F14_pano_24h_1e1_r2.raw
18 Jun 2024 13:55:26,942 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F14_pano_24h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F14_pano_24h_1e1_r2.raw
18 Jun 2024 13:55:26,943 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F01_pano_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F01_pano_24h_ctrl_r1.raw
18 Jun 2024 13:55:26,944 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F01_pano_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F01_pano_24h_ctrl_r1.raw
18 Jun 2024 13:55:26,946 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F06_pano_24h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F06_pano_24h_1e-1_r2.raw
18 Jun 2024 13:55:26,947 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F06_pano_24h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F06_pano_24h_1e-1_r2.raw
18 Jun 2024 13:55:26,949 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F03_pano_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F03_pano_24h_ctrl_r3.raw
18 Jun 2024 13:55:26,950 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F03_pano_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F03_pano_24h_ctrl_r3.raw
18 Jun 2024 13:55:26,951 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F05_pano_24h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F05_pano_24h_1e-1_r1.raw
18 Jun 2024 13:55:26,952 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F05_pano_24h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F05_pano_24h_1e-1_r1.raw
18 Jun 2024 13:55:26,954 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F14_pano_24h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F14_pano_24h_1e1_r2.raw
18 Jun 2024 13:55:26,955 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F14_pano_24h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F14_pano_24h_1e1_r2.raw
18 Jun 2024 13:55:26,957 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F07_pano_24h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F07_pano_24h_1e-1_r3.raw
18 Jun 2024 13:55:26,958 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F07_pano_24h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F07_pano_24h_1e-1_r3.raw
18 Jun 2024 13:55:26,960 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F10_pano_24h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F10_pano_24h_1e0_r2.raw
18 Jun 2024 13:55:26,961 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F10_pano_24h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F10_pano_24h_1e0_r2.raw
18 Jun 2024 13:55:26,962 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F11_pano_24h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F11_pano_24h_1e0_r3.raw
18 Jun 2024 13:55:26,963 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F11_pano_24h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F11_pano_24h_1e0_r3.raw
18 Jun 2024 13:55:26,965 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F07_pano_24h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F07_pano_24h_1e-1_r3.raw
18 Jun 2024 13:55:26,966 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F07_pano_24h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F07_pano_24h_1e-1_r3.raw
18 Jun 2024 13:55:26,968 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F05_pano_24h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F05_pano_24h_1e-1_r1.raw
18 Jun 2024 13:55:26,969 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F05_pano_24h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F05_pano_24h_1e-1_r1.raw
18 Jun 2024 13:55:26,971 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F09_pano_24h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F09_pano_24h_1e0_r1.raw
18 Jun 2024 13:55:26,972 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F09_pano_24h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F09_pano_24h_1e0_r1.raw
18 Jun 2024 13:55:26,973 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F01_pano_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F01_pano_24h_ctrl_r1.raw
18 Jun 2024 13:55:26,974 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F01_pano_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F01_pano_24h_ctrl_r1.raw
18 Jun 2024 13:55:26,976 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F15_pano_24h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F15_pano_24h_1e1_r3.raw
18 Jun 2024 13:55:26,977 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F15_pano_24h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F15_pano_24h_1e1_r3.raw
18 Jun 2024 13:55:26,978 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F06_pano_24h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F06_pano_24h_1e-1_r2.raw
18 Jun 2024 13:55:26,979 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F06_pano_24h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F06_pano_24h_1e-1_r2.raw
18 Jun 2024 13:55:26,981 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F09_pano_24h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F09_pano_24h_1e0_r1.raw
18 Jun 2024 13:55:26,982 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F09_pano_24h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F09_pano_24h_1e0_r1.raw
18 Jun 2024 13:55:26,984 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F02_pano_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F02_pano_24h_ctrl_r2.raw
18 Jun 2024 13:55:26,984 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F02_pano_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F02_pano_24h_ctrl_r2.raw
18 Jun 2024 13:55:26,986 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F03_pano_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F03_pano_24h_ctrl_r3.raw
18 Jun 2024 13:55:26,987 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F03_pano_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F03_pano_24h_ctrl_r3.raw
18 Jun 2024 13:55:26,988 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F02_pano_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F02_pano_24h_ctrl_r2.raw
18 Jun 2024 13:55:26,989 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F02_pano_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/H_F02_pano_24h_ctrl_r2.raw
18 Jun 2024 13:55:26,991 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F15_pano_24h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F15_pano_24h_1e1_r3.raw
18 Jun 2024 13:55:26,992 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F15_pano_24h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/RawFiles/L_F15_pano_24h_1e1_r3.raw
18 Jun 2024 13:55:26,993 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02
18 Jun 2024 13:55:26,993 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:26,994 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:26,996 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:26,997 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:26,999 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:27,000 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:27,002 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:27,003 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:27,004 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/assaydata
18 Jun 2024 13:55:27,005 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano
18 Jun 2024 13:55:27,006 DEBUG: Setting filePathRoot on copied run: 20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files
18 Jun 2024 13:55:27,008 DEBUG: Setting dataFileUri on copied data: 20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02.sky.zip
18 Jun 2024 13:55:27,010 DEBUG: Setting dataFileUri on copied data: 20210304_ExptF_pano_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano/@files/20210304_ExptF_pano_qe_pr0pr5_v03_2024-06-18_10-35-02/20210304_ExptF_pano_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:27,010 INFO : Done importing folder archive for 2_pano
18 Jun 2024 13:55:27,066 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito
18 Jun 2024 13:55:27,066 INFO : Loading folder archive for 3_mito
18 Jun 2024 13:55:27,066 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito
18 Jun 2024 13:55:27,067 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:27,067 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito] Folder type: Targeted MS
18 Jun 2024 13:55:27,067 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:27,128 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:27,129 INFO : Loading container specific module properties
18 Jun 2024 13:55:27,133 INFO : Done importing container specific module properties
18 Jun 2024 13:55:27,134 INFO : Loading queries
18 Jun 2024 13:55:27,137 INFO : 1 query imported
18 Jun 2024 13:55:27,137 INFO : Done importing queries
18 Jun 2024 13:55:27,138 INFO : Loading etl definitions
18 Jun 2024 13:55:27,139 INFO : Loading wikis
18 Jun 2024 13:55:27,140 INFO : 0 wikis imported
18 Jun 2024 13:55:27,140 INFO : Done importing wikis
18 Jun 2024 13:55:27,142 INFO : Starting Data Class Importer
18 Jun 2024 13:55:27,142 INFO : No types XAR file to process.
18 Jun 2024 13:55:27,142 INFO : Finished Data Class Importer
18 Jun 2024 13:55:27,143 INFO : Starting to copy files
18 Jun 2024 13:55:27,143 INFO : Copied 0 files
18 Jun 2024 13:55:27,143 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:27,147 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:27,148 INFO : No types XAR file to process.
18 Jun 2024 13:55:27,148 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:27,149 INFO : Loading xar
18 Jun 2024 13:55:27,221 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:27,223 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:27,225 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:27,225 DEBUG: Protocol import complete
18 Jun 2024 13:55:27,232 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:27,237 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:27,242 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13291:09256b4c-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:27,246 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13291:09256b14-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:27,246 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:27,248 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13291:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:27,249 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13291:09256d50-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:27,252 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito/xar/experiments_and_runs.xar.exploded/Run206851/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:27,253 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito/xar/experiments_and_runs.xar.exploded/Run206851/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:27,253 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito/xar/experiments_and_runs.xar.exploded/Run206851/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip into the system
18 Jun 2024 13:55:27,253 INFO : Starting import from 20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:27,256 INFO : Starting to import Skyline document from 20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:27,257 INFO : Expanding 20210304_ExptE_mito_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:27,286 INFO : Expanding 20210304_ExptE_mito_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:27,287 INFO : Expanding 20210304_ExptE_mito_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:27,297 INFO : 2% Done
18 Jun 2024 13:55:27,382 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:27,384 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:27,586 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:27,606 INFO : 14% Done
18 Jun 2024 13:55:27,704 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:27,704 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:27,721 INFO : 25% Done
18 Jun 2024 13:55:27,807 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:27,807 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:27,820 INFO : 34% Done
18 Jun 2024 13:55:27,896 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:27,896 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:27,915 INFO : 46% Done
18 Jun 2024 13:55:28,024 INFO : 54% Done
18 Jun 2024 13:55:28,114 INFO : 65% Done
18 Jun 2024 13:55:28,206 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:28,206 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:28,218 INFO : 73% Done
18 Jun 2024 13:55:28,287 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:28,287 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:28,298 INFO : 80% Done
18 Jun 2024 13:55:28,366 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:28,368 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:28,430 INFO : Calculating fold changes
18 Jun 2024 13:55:28,431 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:28,604 INFO : 98% Done
18 Jun 2024 13:55:28,604 INFO : Done calculating fold changes.
18 Jun 2024 13:55:28,605 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:28,610 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:28,625 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:28,631 INFO : Cleaning up temp tables
18 Jun 2024 13:55:28,927 INFO : Completed import of Skyline document from 20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:28,929 INFO : 100% Done
18 Jun 2024 13:55:28,938 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito/xar/experiments_and_runs.xar.exploded/Run206851/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip into the system
18 Jun 2024 13:55:28,941 INFO : Done importing xar
18 Jun 2024 13:55:28,942 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:29,023 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:29,023 INFO : Loading File Browser config
18 Jun 2024 13:55:29,023 INFO : Done importing File Browser config
18 Jun 2024 13:55:29,024 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:29,024 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:29,024 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:29,029 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:29,031 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:29,031 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:29,032 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:29,032 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:29,032 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:29,033 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito and creating symlinks
18 Jun 2024 13:55:29,034 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22
18 Jun 2024 13:55:29,038 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:29,039 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:29,040 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:29,042 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:29,044 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:29,045 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:29,049 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:29,050 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:29,052 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles
18 Jun 2024 13:55:29,055 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_mitoC_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_mitoC_6x4p.pdf
18 Jun 2024 13:55:29,056 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_mitoC_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_mitoC_6x4p.pdf
18 Jun 2024 13:55:29,058 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_version01.csv
18 Jun 2024 13:55:29,059 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/ExptE_version01.csv
18 Jun 2024 13:55:29,060 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptE_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptE_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:29,061 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptE_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptE_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:29,063 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles
18 Jun 2024 13:55:29,065 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E06_MMC_24h_100_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E06_MMC_24h_100_r2.raw
18 Jun 2024 13:55:29,066 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E06_MMC_24h_100_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E06_MMC_24h_100_r2.raw
18 Jun 2024 13:55:29,068 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E11_MMC_24h_500_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E11_MMC_24h_500_r3.raw
18 Jun 2024 13:55:29,069 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E11_MMC_24h_500_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E11_MMC_24h_500_r3.raw
18 Jun 2024 13:55:29,071 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E10_MMC_24h_500_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E10_MMC_24h_500_r2.raw
18 Jun 2024 13:55:29,073 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E10_MMC_24h_500_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E10_MMC_24h_500_r2.raw
18 Jun 2024 13:55:29,075 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E09_MMC_24h_500_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E09_MMC_24h_500_r1.raw
18 Jun 2024 13:55:29,077 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E09_MMC_24h_500_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E09_MMC_24h_500_r1.raw
18 Jun 2024 13:55:29,080 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E14_MMC_24h_1000_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E14_MMC_24h_1000_r2.raw
18 Jun 2024 13:55:29,081 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E14_MMC_24h_1000_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E14_MMC_24h_1000_r2.raw
18 Jun 2024 13:55:29,083 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E03_MMC_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E03_MMC_24h_ctrl_r3.raw
18 Jun 2024 13:55:29,084 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E03_MMC_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E03_MMC_24h_ctrl_r3.raw
18 Jun 2024 13:55:29,088 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E01_MMC_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E01_MMC_24h_ctrl_r1.raw
18 Jun 2024 13:55:29,089 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E01_MMC_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E01_MMC_24h_ctrl_r1.raw
18 Jun 2024 13:55:29,092 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E05_MMC_24h_100_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E05_MMC_24h_100_r1.raw
18 Jun 2024 13:55:29,093 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E05_MMC_24h_100_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E05_MMC_24h_100_r1.raw
18 Jun 2024 13:55:29,095 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E13_MMC_24h_1000_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E13_MMC_24h_1000_r1.raw
18 Jun 2024 13:55:29,096 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E13_MMC_24h_1000_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E13_MMC_24h_1000_r1.raw
18 Jun 2024 13:55:29,099 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E02_MMC_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E02_MMC_24h_ctrl_r2.raw
18 Jun 2024 13:55:29,100 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E02_MMC_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E02_MMC_24h_ctrl_r2.raw
18 Jun 2024 13:55:29,103 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E14_MMC_24h_1000_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E14_MMC_24h_1000_r2.raw
18 Jun 2024 13:55:29,104 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E14_MMC_24h_1000_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E14_MMC_24h_1000_r2.raw
18 Jun 2024 13:55:29,106 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E15_MMC_24h_1000_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E15_MMC_24h_1000_r3.raw
18 Jun 2024 13:55:29,107 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E15_MMC_24h_1000_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E15_MMC_24h_1000_r3.raw
18 Jun 2024 13:55:29,109 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E03_MMC_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E03_MMC_24h_ctrl_r3.raw
18 Jun 2024 13:55:29,110 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E03_MMC_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E03_MMC_24h_ctrl_r3.raw
18 Jun 2024 13:55:29,112 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E10_MMC_24h_500_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E10_MMC_24h_500_r2.raw
18 Jun 2024 13:55:29,112 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E10_MMC_24h_500_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E10_MMC_24h_500_r2.raw
18 Jun 2024 13:55:29,114 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E13_MMC_24h_1000_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E13_MMC_24h_1000_r1.raw
18 Jun 2024 13:55:29,115 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E13_MMC_24h_1000_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E13_MMC_24h_1000_r1.raw
18 Jun 2024 13:55:29,117 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E05_MMC_24h_100_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E05_MMC_24h_100_r1.raw
18 Jun 2024 13:55:29,118 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E05_MMC_24h_100_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E05_MMC_24h_100_r1.raw
18 Jun 2024 13:55:29,120 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E06_MMC_24h_100_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E06_MMC_24h_100_r2.raw
18 Jun 2024 13:55:29,122 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E06_MMC_24h_100_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E06_MMC_24h_100_r2.raw
18 Jun 2024 13:55:29,123 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E11_MMC_24h_500_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E11_MMC_24h_500_r3.raw
18 Jun 2024 13:55:29,125 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E11_MMC_24h_500_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E11_MMC_24h_500_r3.raw
18 Jun 2024 13:55:29,127 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E09_MMC_24h_500_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E09_MMC_24h_500_r1.raw
18 Jun 2024 13:55:29,128 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E09_MMC_24h_500_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E09_MMC_24h_500_r1.raw
18 Jun 2024 13:55:29,130 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E07_MMC_24h_100_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E07_MMC_24h_100_r3.raw
18 Jun 2024 13:55:29,131 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E07_MMC_24h_100_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E07_MMC_24h_100_r3.raw
18 Jun 2024 13:55:29,133 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E07_MMC_24h_100_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E07_MMC_24h_100_r3.raw
18 Jun 2024 13:55:29,134 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E07_MMC_24h_100_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E07_MMC_24h_100_r3.raw
18 Jun 2024 13:55:29,136 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E02_MMC_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E02_MMC_24h_ctrl_r2.raw
18 Jun 2024 13:55:29,137 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E02_MMC_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/H_E02_MMC_24h_ctrl_r2.raw
18 Jun 2024 13:55:29,140 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E01_MMC_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E01_MMC_24h_ctrl_r1.raw
18 Jun 2024 13:55:29,142 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E01_MMC_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E01_MMC_24h_ctrl_r1.raw
18 Jun 2024 13:55:29,144 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E15_MMC_24h_1000_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E15_MMC_24h_1000_r3.raw
18 Jun 2024 13:55:29,145 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E15_MMC_24h_1000_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/RawFiles/L_E15_MMC_24h_1000_r3.raw
18 Jun 2024 13:55:29,147 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/assaydata
18 Jun 2024 13:55:29,147 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito
18 Jun 2024 13:55:29,149 DEBUG: Setting filePathRoot on copied run: 20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files
18 Jun 2024 13:55:29,151 DEBUG: Setting dataFileUri on copied data: 20210304_ExptE_mito_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22/20210304_ExptE_mito_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:29,153 DEBUG: Setting dataFileUri on copied data: 20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito/@files/20210304_ExptE_mito_qe_pr0pr5_v03_2024-06-18_10-43-22.sky.zip
18 Jun 2024 13:55:29,153 INFO : Done importing folder archive for 3_mito
18 Jun 2024 13:55:29,211 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD
18 Jun 2024 13:55:29,211 INFO : Loading folder archive for 4_ActD
18 Jun 2024 13:55:29,212 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD
18 Jun 2024 13:55:29,213 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:29,213 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD] Folder type: Targeted MS
18 Jun 2024 13:55:29,213 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:29,273 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:29,274 INFO : Loading container specific module properties
18 Jun 2024 13:55:29,277 INFO : Done importing container specific module properties
18 Jun 2024 13:55:29,278 INFO : Loading queries
18 Jun 2024 13:55:29,282 INFO : 1 query imported
18 Jun 2024 13:55:29,283 INFO : Done importing queries
18 Jun 2024 13:55:29,284 INFO : Loading etl definitions
18 Jun 2024 13:55:29,285 INFO : Loading wikis
18 Jun 2024 13:55:29,286 INFO : 0 wikis imported
18 Jun 2024 13:55:29,286 INFO : Done importing wikis
18 Jun 2024 13:55:29,289 INFO : Starting Data Class Importer
18 Jun 2024 13:55:29,289 INFO : No types XAR file to process.
18 Jun 2024 13:55:29,289 INFO : Finished Data Class Importer
18 Jun 2024 13:55:29,290 INFO : Starting to copy files
18 Jun 2024 13:55:29,290 INFO : Copied 0 files
18 Jun 2024 13:55:29,290 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:29,295 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:29,295 INFO : No types XAR file to process.
18 Jun 2024 13:55:29,295 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:29,296 INFO : Loading xar
18 Jun 2024 13:55:29,382 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:29,384 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:29,386 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:29,386 DEBUG: Protocol import complete
18 Jun 2024 13:55:29,394 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:29,399 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:29,404 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13292:09257462-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:29,407 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13292:09257428-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:29,407 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:29,409 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13292:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:29,410 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13292:092576a6-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:29,413 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD/xar/experiments_and_runs.xar.exploded/Run206852/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:29,413 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD/xar/experiments_and_runs.xar.exploded/Run206852/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:29,413 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD/xar/experiments_and_runs.xar.exploded/Run206852/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip into the system
18 Jun 2024 13:55:29,414 INFO : Starting import from 20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:29,417 INFO : Starting to import Skyline document from 20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:29,502 INFO : Expanding 20210304_ExptB_ActD_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:29,542 INFO : Expanding 20210304_ExptB_ActD_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:29,543 INFO : Expanding 20210304_ExptB_ActD_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:29,553 INFO : 2% Done
18 Jun 2024 13:55:29,672 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:29,673 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:29,888 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:29,914 INFO : 14% Done
18 Jun 2024 13:55:30,039 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:30,039 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:30,061 INFO : 25% Done
18 Jun 2024 13:55:30,173 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:30,173 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:30,189 INFO : 34% Done
18 Jun 2024 13:55:30,287 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:30,287 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:30,312 INFO : 45% Done
18 Jun 2024 13:55:30,450 INFO : 54% Done
18 Jun 2024 13:55:30,561 INFO : 65% Done
18 Jun 2024 13:55:30,671 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:30,671 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:30,685 INFO : 73% Done
18 Jun 2024 13:55:30,770 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:30,771 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:30,784 INFO : 80% Done
18 Jun 2024 13:55:30,872 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:30,873 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:30,935 INFO : Calculating fold changes
18 Jun 2024 13:55:30,935 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:31,120 INFO : 98% Done
18 Jun 2024 13:55:31,120 INFO : Done calculating fold changes.
18 Jun 2024 13:55:31,121 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:31,126 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:31,147 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:31,155 INFO : Cleaning up temp tables
18 Jun 2024 13:55:31,464 INFO : Completed import of Skyline document from 20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:31,466 INFO : 100% Done
18 Jun 2024 13:55:31,473 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD/xar/experiments_and_runs.xar.exploded/Run206852/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip into the system
18 Jun 2024 13:55:31,476 INFO : Done importing xar
18 Jun 2024 13:55:31,477 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:31,557 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:31,557 INFO : Loading File Browser config
18 Jun 2024 13:55:31,557 INFO : Done importing File Browser config
18 Jun 2024 13:55:31,558 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:31,559 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:31,559 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:31,563 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:31,565 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:31,565 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:31,566 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:31,566 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:31,566 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:31,567 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD and creating symlinks
18 Jun 2024 13:55:31,568 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47
18 Jun 2024 13:55:31,569 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:31,570 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:31,572 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:31,573 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:31,575 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:31,576 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:31,578 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles
18 Jun 2024 13:55:31,580 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_20210304_QE_rerunsAug2020_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_20210304_QE_rerunsAug2020_version01.csv
18 Jun 2024 13:55:31,582 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_20210304_QE_rerunsAug2020_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_20210304_QE_rerunsAug2020_version01.csv
18 Jun 2024 13:55:31,583 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_ActD_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_ActD_6x4p.pdf
18 Jun 2024 13:55:31,585 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_ActD_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/ExptB_ActD_6x4p.pdf
18 Jun 2024 13:55:31,586 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptB_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptB_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:31,588 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptB_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptB_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:31,590 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles
18 Jun 2024 13:55:31,592 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B06_ActD_2h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B06_ActD_2h_1e-1_r2.raw
18 Jun 2024 13:55:31,593 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B06_ActD_2h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B06_ActD_2h_1e-1_r2.raw
18 Jun 2024 13:55:31,595 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B12_ActD_2h_1e0_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B12_ActD_2h_1e0_r4.raw
18 Jun 2024 13:55:31,596 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B12_ActD_2h_1e0_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B12_ActD_2h_1e0_r4.raw
18 Jun 2024 13:55:31,598 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B04_ActD_2h_ctrl_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B04_ActD_2h_ctrl_r4.raw
18 Jun 2024 13:55:31,599 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B04_ActD_2h_ctrl_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B04_ActD_2h_ctrl_r4.raw
18 Jun 2024 13:55:31,602 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B07_ActD_2h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B07_ActD_2h_1e-1_r3.raw
18 Jun 2024 13:55:31,603 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B07_ActD_2h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B07_ActD_2h_1e-1_r3.raw
18 Jun 2024 13:55:31,605 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B12_ActD_2h_1e0_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B12_ActD_2h_1e0_r4.raw
18 Jun 2024 13:55:31,606 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B12_ActD_2h_1e0_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B12_ActD_2h_1e0_r4.raw
18 Jun 2024 13:55:31,608 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B07_ActD_2h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B07_ActD_2h_1e-1_r3.raw
18 Jun 2024 13:55:31,609 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B07_ActD_2h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B07_ActD_2h_1e-1_r3.raw
18 Jun 2024 13:55:31,611 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B03_ActD_2h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B03_ActD_2h_ctrl_r3.raw
18 Jun 2024 13:55:31,612 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B03_ActD_2h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B03_ActD_2h_ctrl_r3.raw
18 Jun 2024 13:55:31,614 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B11_ActD_2h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B11_ActD_2h_1e0_r3.raw
18 Jun 2024 13:55:31,615 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B11_ActD_2h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B11_ActD_2h_1e0_r3.raw
18 Jun 2024 13:55:31,617 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B09_ActD_2h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B09_ActD_2h_1e0_r1.raw
18 Jun 2024 13:55:31,619 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B09_ActD_2h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B09_ActD_2h_1e0_r1.raw
18 Jun 2024 13:55:31,623 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B16_ActD_2h_1e1_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B16_ActD_2h_1e1_r4.raw
18 Jun 2024 13:55:31,624 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B16_ActD_2h_1e1_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B16_ActD_2h_1e1_r4.raw
18 Jun 2024 13:55:31,626 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B08_ActD_2h_1e-1_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B08_ActD_2h_1e-1_r4.raw
18 Jun 2024 13:55:31,628 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B08_ActD_2h_1e-1_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B08_ActD_2h_1e-1_r4.raw
18 Jun 2024 13:55:31,630 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B01_ActD_2h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B01_ActD_2h_ctrl_r1.raw
18 Jun 2024 13:55:31,631 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B01_ActD_2h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B01_ActD_2h_ctrl_r1.raw
18 Jun 2024 13:55:31,633 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B14_ActD_2h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B14_ActD_2h_1e1_r2.raw
18 Jun 2024 13:55:31,634 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B14_ActD_2h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B14_ActD_2h_1e1_r2.raw
18 Jun 2024 13:55:31,636 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B02_ActD_2h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B02_ActD_2h_ctrl_r2.raw
18 Jun 2024 13:55:31,637 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B02_ActD_2h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B02_ActD_2h_ctrl_r2.raw
18 Jun 2024 13:55:31,639 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B06_ActD_2h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B06_ActD_2h_1e-1_r2.raw
18 Jun 2024 13:55:31,640 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B06_ActD_2h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B06_ActD_2h_1e-1_r2.raw
18 Jun 2024 13:55:31,643 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B05_ActD_2h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B05_ActD_2h_1e-1_r1.raw
18 Jun 2024 13:55:31,644 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B05_ActD_2h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B05_ActD_2h_1e-1_r1.raw
18 Jun 2024 13:55:31,645 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B04_ActD_2h_ctrl_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B04_ActD_2h_ctrl_r4.raw
18 Jun 2024 13:55:31,646 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B04_ActD_2h_ctrl_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B04_ActD_2h_ctrl_r4.raw
18 Jun 2024 13:55:31,648 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B13_ActD_2h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B13_ActD_2h_1e1_r1.raw
18 Jun 2024 13:55:31,649 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B13_ActD_2h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B13_ActD_2h_1e1_r1.raw
18 Jun 2024 13:55:31,651 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B16_ActD_2h_1e1_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B16_ActD_2h_1e1_r4.raw
18 Jun 2024 13:55:31,652 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B16_ActD_2h_1e1_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B16_ActD_2h_1e1_r4.raw
18 Jun 2024 13:55:31,654 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B11_ActD_2h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B11_ActD_2h_1e0_r3.raw
18 Jun 2024 13:55:31,655 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B11_ActD_2h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B11_ActD_2h_1e0_r3.raw
18 Jun 2024 13:55:31,657 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B03_ActD_2h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B03_ActD_2h_ctrl_r3.raw
18 Jun 2024 13:55:31,658 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B03_ActD_2h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B03_ActD_2h_ctrl_r3.raw
18 Jun 2024 13:55:31,660 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B10_ActD_2h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B10_ActD_2h_1e0_r2.raw
18 Jun 2024 13:55:31,661 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B10_ActD_2h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B10_ActD_2h_1e0_r2.raw
18 Jun 2024 13:55:31,663 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B10_ActD_2h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B10_ActD_2h_1e0_r2.raw
18 Jun 2024 13:55:31,665 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B10_ActD_2h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B10_ActD_2h_1e0_r2.raw
18 Jun 2024 13:55:31,669 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B15_ActD_2h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B15_ActD_2h_1e1_r3.raw
18 Jun 2024 13:55:31,670 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B15_ActD_2h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B15_ActD_2h_1e1_r3.raw
18 Jun 2024 13:55:31,673 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B01_ActD_2h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B01_ActD_2h_ctrl_r1.raw
18 Jun 2024 13:55:31,674 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B01_ActD_2h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B01_ActD_2h_ctrl_r1.raw
18 Jun 2024 13:55:31,676 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B13_ActD_2h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B13_ActD_2h_1e1_r1.raw
18 Jun 2024 13:55:31,677 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B13_ActD_2h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B13_ActD_2h_1e1_r1.raw
18 Jun 2024 13:55:31,679 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B02_ActD_2h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B02_ActD_2h_ctrl_r2.raw
18 Jun 2024 13:55:31,680 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B02_ActD_2h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B02_ActD_2h_ctrl_r2.raw
18 Jun 2024 13:55:31,682 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B15_ActD_2h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B15_ActD_2h_1e1_r3.raw
18 Jun 2024 13:55:31,683 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B15_ActD_2h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B15_ActD_2h_1e1_r3.raw
18 Jun 2024 13:55:31,685 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B05_ActD_2h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B05_ActD_2h_1e-1_r1.raw
18 Jun 2024 13:55:31,686 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B05_ActD_2h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B05_ActD_2h_1e-1_r1.raw
18 Jun 2024 13:55:31,689 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B08_ActD_2h_1e-1_r4.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B08_ActD_2h_1e-1_r4.raw
18 Jun 2024 13:55:31,690 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B08_ActD_2h_1e-1_r4.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/H_B08_ActD_2h_1e-1_r4.raw
18 Jun 2024 13:55:31,691 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B14_ActD_2h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B14_ActD_2h_1e1_r2.raw
18 Jun 2024 13:55:31,693 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B14_ActD_2h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B14_ActD_2h_1e1_r2.raw
18 Jun 2024 13:55:31,695 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B09_ActD_2h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B09_ActD_2h_1e0_r1.raw
18 Jun 2024 13:55:31,696 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B09_ActD_2h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/RawFiles/L_B09_ActD_2h_1e0_r1.raw
18 Jun 2024 13:55:31,698 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:31,699 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:31,701 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/assaydata
18 Jun 2024 13:55:31,702 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD
18 Jun 2024 13:55:31,703 DEBUG: Setting filePathRoot on copied run: 20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files
18 Jun 2024 13:55:31,706 DEBUG: Setting dataFileUri on copied data: 20210304_ExptB_ActD_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47/20210304_ExptB_ActD_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:31,707 DEBUG: Setting dataFileUri on copied data: 20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD/@files/20210304_ExptB_ActD_qe_pr0pr5_v03_2024-06-18_10-44-47.sky.zip
18 Jun 2024 13:55:31,707 INFO : Done importing folder archive for 4_ActD
18 Jun 2024 13:55:31,762 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1
18 Jun 2024 13:55:31,762 INFO : Loading folder archive for 5_Ei1
18 Jun 2024 13:55:31,762 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1
18 Jun 2024 13:55:31,763 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:31,763 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1] Folder type: Targeted MS
18 Jun 2024 13:55:31,763 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:31,823 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:31,825 INFO : Loading container specific module properties
18 Jun 2024 13:55:31,828 INFO : Done importing container specific module properties
18 Jun 2024 13:55:31,829 INFO : Loading queries
18 Jun 2024 13:55:31,832 INFO : 1 query imported
18 Jun 2024 13:55:31,832 INFO : Done importing queries
18 Jun 2024 13:55:31,833 INFO : Loading etl definitions
18 Jun 2024 13:55:31,835 INFO : Loading wikis
18 Jun 2024 13:55:31,836 INFO : 0 wikis imported
18 Jun 2024 13:55:31,836 INFO : Done importing wikis
18 Jun 2024 13:55:31,837 INFO : Starting Data Class Importer
18 Jun 2024 13:55:31,837 INFO : No types XAR file to process.
18 Jun 2024 13:55:31,837 INFO : Finished Data Class Importer
18 Jun 2024 13:55:31,838 INFO : Starting to copy files
18 Jun 2024 13:55:31,838 INFO : Copied 0 files
18 Jun 2024 13:55:31,838 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:31,843 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:31,843 INFO : No types XAR file to process.
18 Jun 2024 13:55:31,843 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:31,844 INFO : Loading xar
18 Jun 2024 13:55:31,907 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:31,909 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:31,910 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:31,910 DEBUG: Protocol import complete
18 Jun 2024 13:55:31,918 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:31,922 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:31,926 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13293:09258023-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:31,930 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13293:09257fdd-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:31,930 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:31,931 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13293:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:31,932 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13293:0925825a-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:31,935 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1/xar/experiments_and_runs.xar.exploded/Run206853/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:31,935 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1/xar/experiments_and_runs.xar.exploded/Run206853/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:31,935 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1/xar/experiments_and_runs.xar.exploded/Run206853/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip into the system
18 Jun 2024 13:55:31,936 INFO : Starting import from 20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:31,939 INFO : Starting to import Skyline document from 20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:31,940 INFO : Expanding 20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:31,970 INFO : Expanding 20210304_ExptD_Ei1_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:31,970 INFO : Expanding 20210304_ExptD_Ei1_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:31,978 INFO : 2% Done
18 Jun 2024 13:55:32,065 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:32,066 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:32,275 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:32,294 INFO : 14% Done
18 Jun 2024 13:55:32,390 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:32,390 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:32,407 INFO : 25% Done
18 Jun 2024 13:55:32,497 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:32,497 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:32,510 INFO : 34% Done
18 Jun 2024 13:55:32,584 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:32,585 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:32,603 INFO : 46% Done
18 Jun 2024 13:55:32,712 INFO : 54% Done
18 Jun 2024 13:55:32,801 INFO : 65% Done
18 Jun 2024 13:55:32,890 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:32,890 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:32,900 INFO : 73% Done
18 Jun 2024 13:55:32,964 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:32,964 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:32,974 INFO : 80% Done
18 Jun 2024 13:55:33,039 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:33,040 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:33,102 INFO : Calculating fold changes
18 Jun 2024 13:55:33,102 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:33,258 INFO : 98% Done
18 Jun 2024 13:55:33,258 INFO : Done calculating fold changes.
18 Jun 2024 13:55:33,259 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:33,264 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:33,280 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:33,285 INFO : Cleaning up temp tables
18 Jun 2024 13:55:33,578 INFO : Completed import of Skyline document from 20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:33,580 INFO : 100% Done
18 Jun 2024 13:55:33,587 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1/xar/experiments_and_runs.xar.exploded/Run206853/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip into the system
18 Jun 2024 13:55:33,591 INFO : Done importing xar
18 Jun 2024 13:55:33,592 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:33,678 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:33,678 INFO : Loading File Browser config
18 Jun 2024 13:55:33,678 INFO : Done importing File Browser config
18 Jun 2024 13:55:33,679 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:33,680 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:33,680 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:33,684 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:33,686 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:33,687 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:33,687 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:33,688 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:33,688 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:33,689 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1 and creating symlinks
18 Jun 2024 13:55:33,691 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles
18 Jun 2024 13:55:33,693 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ei1_version01.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ei1_version01.csv
18 Jun 2024 13:55:33,694 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ei1_version01.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ei1_version01.csv
18 Jun 2024 13:55:33,696 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptD_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptD_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:33,697 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptD_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptD_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:33,698 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ezh2i_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ezh2i_6x4p.pdf
18 Jun 2024 13:55:33,699 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ezh2i_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/SupplementaryFiles/ExptD_Ezh2i_6x4p.pdf
18 Jun 2024 13:55:33,701 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles
18 Jun 2024 13:55:33,703 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D10_Ei1_24h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D10_Ei1_24h_1e0_r2.raw
18 Jun 2024 13:55:33,704 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D10_Ei1_24h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D10_Ei1_24h_1e0_r2.raw
18 Jun 2024 13:55:33,705 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D14_Ei1_24h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D14_Ei1_24h_1e1_r2.raw
18 Jun 2024 13:55:33,706 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D14_Ei1_24h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D14_Ei1_24h_1e1_r2.raw
18 Jun 2024 13:55:33,708 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D05_Ei1_24h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D05_Ei1_24h_1e-1_r1.raw
18 Jun 2024 13:55:33,709 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D05_Ei1_24h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D05_Ei1_24h_1e-1_r1.raw
18 Jun 2024 13:55:33,710 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D02_Ei1_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D02_Ei1_24h_ctrl_r2.raw
18 Jun 2024 13:55:33,711 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D02_Ei1_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D02_Ei1_24h_ctrl_r2.raw
18 Jun 2024 13:55:33,713 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D14_Ei1_24h_1e1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D14_Ei1_24h_1e1_r2.raw
18 Jun 2024 13:55:33,714 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D14_Ei1_24h_1e1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D14_Ei1_24h_1e1_r2.raw
18 Jun 2024 13:55:33,715 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D02_Ei1_24h_ctrl_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D02_Ei1_24h_ctrl_r2.raw
18 Jun 2024 13:55:33,717 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D02_Ei1_24h_ctrl_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D02_Ei1_24h_ctrl_r2.raw
18 Jun 2024 13:55:33,719 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D06_Ei1_24h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D06_Ei1_24h_1e-1_r2.raw
18 Jun 2024 13:55:33,720 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D06_Ei1_24h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D06_Ei1_24h_1e-1_r2.raw
18 Jun 2024 13:55:33,721 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D01_Ei1_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D01_Ei1_24h_ctrl_r1.raw
18 Jun 2024 13:55:33,722 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D01_Ei1_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D01_Ei1_24h_ctrl_r1.raw
18 Jun 2024 13:55:33,727 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D05_Ei1_24h_1e-1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D05_Ei1_24h_1e-1_r1.raw
18 Jun 2024 13:55:33,728 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D05_Ei1_24h_1e-1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D05_Ei1_24h_1e-1_r1.raw
18 Jun 2024 13:55:33,730 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D03_Ei1_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D03_Ei1_24h_ctrl_r3.raw
18 Jun 2024 13:55:33,731 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D03_Ei1_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D03_Ei1_24h_ctrl_r3.raw
18 Jun 2024 13:55:33,733 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D09_Ei1_24h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D09_Ei1_24h_1e0_r1.raw
18 Jun 2024 13:55:33,735 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D09_Ei1_24h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D09_Ei1_24h_1e0_r1.raw
18 Jun 2024 13:55:33,736 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D10_Ei1_24h_1e0_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D10_Ei1_24h_1e0_r2.raw
18 Jun 2024 13:55:33,738 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D10_Ei1_24h_1e0_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D10_Ei1_24h_1e0_r2.raw
18 Jun 2024 13:55:33,740 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D06_Ei1_24h_1e-1_r2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D06_Ei1_24h_1e-1_r2.raw
18 Jun 2024 13:55:33,741 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D06_Ei1_24h_1e-1_r2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D06_Ei1_24h_1e-1_r2.raw
18 Jun 2024 13:55:33,743 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D15_Ei1_24h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D15_Ei1_24h_1e1_r3.raw
18 Jun 2024 13:55:33,744 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D15_Ei1_24h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D15_Ei1_24h_1e1_r3.raw
18 Jun 2024 13:55:33,747 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D13_Ei1_24h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D13_Ei1_24h_1e1_r1.raw
18 Jun 2024 13:55:33,748 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D13_Ei1_24h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D13_Ei1_24h_1e1_r1.raw
18 Jun 2024 13:55:33,750 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D11_Ei1_24h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D11_Ei1_24h_1e0_r3.raw
18 Jun 2024 13:55:33,752 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D11_Ei1_24h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D11_Ei1_24h_1e0_r3.raw
18 Jun 2024 13:55:33,753 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D01_Ei1_24h_ctrl_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D01_Ei1_24h_ctrl_r1.raw
18 Jun 2024 13:55:33,754 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D01_Ei1_24h_ctrl_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D01_Ei1_24h_ctrl_r1.raw
18 Jun 2024 13:55:33,757 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D07_Ei1_24h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D07_Ei1_24h_1e-1_r3.raw
18 Jun 2024 13:55:33,758 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D07_Ei1_24h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D07_Ei1_24h_1e-1_r3.raw
18 Jun 2024 13:55:33,760 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D15_Ei1_24h_1e1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D15_Ei1_24h_1e1_r3.raw
18 Jun 2024 13:55:33,761 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D15_Ei1_24h_1e1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D15_Ei1_24h_1e1_r3.raw
18 Jun 2024 13:55:33,763 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D13_Ei1_24h_1e1_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D13_Ei1_24h_1e1_r1.raw
18 Jun 2024 13:55:33,764 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D13_Ei1_24h_1e1_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D13_Ei1_24h_1e1_r1.raw
18 Jun 2024 13:55:33,766 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D09_Ei1_24h_1e0_r1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D09_Ei1_24h_1e0_r1.raw
18 Jun 2024 13:55:33,766 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D09_Ei1_24h_1e0_r1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D09_Ei1_24h_1e0_r1.raw
18 Jun 2024 13:55:33,768 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D07_Ei1_24h_1e-1_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D07_Ei1_24h_1e-1_r3.raw
18 Jun 2024 13:55:33,769 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D07_Ei1_24h_1e-1_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D07_Ei1_24h_1e-1_r3.raw
18 Jun 2024 13:55:33,771 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D03_Ei1_24h_ctrl_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D03_Ei1_24h_ctrl_r3.raw
18 Jun 2024 13:55:33,772 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D03_Ei1_24h_ctrl_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/H_D03_Ei1_24h_ctrl_r3.raw
18 Jun 2024 13:55:33,773 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D11_Ei1_24h_1e0_r3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D11_Ei1_24h_1e0_r3.raw
18 Jun 2024 13:55:33,774 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D11_Ei1_24h_1e0_r3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/RawFiles/L_D11_Ei1_24h_1e0_r3.raw
18 Jun 2024 13:55:33,775 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00
18 Jun 2024 13:55:33,777 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:33,778 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:33,779 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:33,781 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:33,783 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:33,784 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:33,786 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:33,787 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:33,788 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/assaydata
18 Jun 2024 13:55:33,789 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1
18 Jun 2024 13:55:33,790 DEBUG: Setting filePathRoot on copied run: 20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files
18 Jun 2024 13:55:33,793 DEBUG: Setting dataFileUri on copied data: 20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00/20210304_ExptD_Ei1_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:33,795 DEBUG: Setting dataFileUri on copied data: 20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1/@files/20210304_ExptD_Ei1_qe_pr0pr5_v03_2024-06-18_10-46-00.sky.zip
18 Jun 2024 13:55:33,795 INFO : Done importing folder archive for 5_Ei1
18 Jun 2024 13:55:33,851 INFO : New folder created with inherited permissions: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo
18 Jun 2024 13:55:33,851 INFO : Loading folder archive for 6_etopo
18 Jun 2024 13:55:33,851 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo] Importing folder properties from: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo
18 Jun 2024 13:55:33,852 INFO : Loading folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:33,852 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo] Folder type: Targeted MS
18 Jun 2024 13:55:33,852 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo] Active modules: Search, Assay, Pipeline, Query, Core, MS2, Announcements, PanoramaPublic, TargetedMS, Issues, API, Experiment, FileContent, Wiki
18 Jun 2024 13:55:33,914 INFO : Done importing folder properties (folder type, settings and active modules)
18 Jun 2024 13:55:33,915 INFO : Loading container specific module properties
18 Jun 2024 13:55:33,918 INFO : Done importing container specific module properties
18 Jun 2024 13:55:33,920 INFO : Loading queries
18 Jun 2024 13:55:33,923 INFO : 1 query imported
18 Jun 2024 13:55:33,923 INFO : Done importing queries
18 Jun 2024 13:55:33,924 INFO : Loading etl definitions
18 Jun 2024 13:55:33,925 INFO : Loading wikis
18 Jun 2024 13:55:33,926 INFO : 0 wikis imported
18 Jun 2024 13:55:33,926 INFO : Done importing wikis
18 Jun 2024 13:55:33,928 INFO : Starting Data Class Importer
18 Jun 2024 13:55:33,928 INFO : No types XAR file to process.
18 Jun 2024 13:55:33,928 INFO : Finished Data Class Importer
18 Jun 2024 13:55:33,928 INFO : Starting to copy files
18 Jun 2024 13:55:33,929 INFO : Copied 0 files
18 Jun 2024 13:55:33,929 INFO : Ensuring exp.data rows exist for imported files
18 Jun 2024 13:55:33,933 INFO : Starting Sample Type Importer
18 Jun 2024 13:55:33,933 INFO : No types XAR file to process.
18 Jun 2024 13:55:33,933 INFO : Finished Sample Type Importer
18 Jun 2024 13:55:33,934 INFO : Loading xar
18 Jun 2024 13:55:34,098 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:34,100 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:34,102 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:34,102 DEBUG: Protocol import complete
18 Jun 2024 13:55:34,109 DEBUG: Protocol action set import complete
18 Jun 2024 13:55:34,114 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip'
18 Jun 2024 13:55:34,119 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-13294:09258cdb-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:34,123 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-13294:09258ca1-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:34,123 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip.Core'
18 Jun 2024 13:55:34,125 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-13294:TargetedMS.ImportSkyZip.Output'
18 Jun 2024 13:55:34,125 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-13294:09258f1d-0faf-103d-b086-dc22ffcda54f'
18 Jun 2024 13:55:34,129 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo/xar/experiments_and_runs.xar.exploded/Run206854/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:34,129 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo/xar/experiments_and_runs.xar.exploded/Run206854/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd into the system
18 Jun 2024 13:55:34,129 DEBUG: Trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo/xar/experiments_and_runs.xar.exploded/Run206854/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip into the system
18 Jun 2024 13:55:34,130 INFO : Starting import from 20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:34,132 INFO : Starting to import Skyline document from 20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:34,133 INFO : Expanding 20210304_ExptC_etopo_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:34,222 INFO : Expanding 20210304_ExptC_etopo_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:34,223 INFO : Expanding 20210304_ExptC_etopo_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:34,232 INFO : 2% Done
18 Jun 2024 13:55:34,331 DEBUG: Starting to load chromatogram headers
18 Jun 2024 13:55:34,332 DEBUG: Done loading chromatogram headers
18 Jun 2024 13:55:34,537 INFO : Inserting H2A_shared_all_HUMAN
18 Jun 2024 13:55:34,556 INFO : 14% Done
18 Jun 2024 13:55:34,659 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:34,659 INFO : Inserting H2A_specific_common1_HUMAN
18 Jun 2024 13:55:34,677 INFO : 25% Done
18 Jun 2024 13:55:34,771 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:34,771 INFO : Inserting H2A_specific_common3_HUMAN
18 Jun 2024 13:55:34,784 INFO : 34% Done
18 Jun 2024 13:55:34,866 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:34,866 INFO : Inserting H2B_shared_all_HUMAN
18 Jun 2024 13:55:34,886 INFO : 46% Done
18 Jun 2024 13:55:34,999 INFO : 54% Done
18 Jun 2024 13:55:35,091 INFO : 65% Done
18 Jun 2024 13:55:35,183 DEBUG: Total peptides inserted: 3
18 Jun 2024 13:55:35,183 INFO : Inserting H2B_specific_common1_HUMAN
18 Jun 2024 13:55:35,195 INFO : 73% Done
18 Jun 2024 13:55:35,266 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:35,266 INFO : Inserting H2B_specific_common2_HUMAN
18 Jun 2024 13:55:35,276 INFO : 80% Done
18 Jun 2024 13:55:35,349 DEBUG: Total peptides inserted: 1
18 Jun 2024 13:55:35,350 INFO : Done parsing Skyline document.
18 Jun 2024 13:55:35,412 INFO : Calculating fold changes
18 Jun 2024 13:55:35,412 DEBUG: Calculating fold change for group comparison test, 1 of 1
18 Jun 2024 13:55:35,587 INFO : 98% Done
18 Jun 2024 13:55:35,587 INFO : Done calculating fold changes.
18 Jun 2024 13:55:35,588 INFO : Creating and populating temp tables for Proportion values
18 Jun 2024 13:55:35,593 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
18 Jun 2024 13:55:35,608 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
18 Jun 2024 13:55:35,614 INFO : Cleaning up temp tables
18 Jun 2024 13:55:35,911 INFO : Completed import of Skyline document from 20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:35,913 INFO : 100% Done
18 Jun 2024 13:55:35,920 DEBUG: Finished trying to load data file file:///data/labkey/files/Panorama%20Public/2024/Case%20Western%20Reserve%20U%20Lund%20Lab%20-%202024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo/xar/experiments_and_runs.xar.exploded/Run206854/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip into the system
18 Jun 2024 13:55:35,923 INFO : Done importing xar
18 Jun 2024 13:55:35,924 INFO : Loading pages and webpart properties
18 Jun 2024 13:55:36,005 INFO : Done importing 4 page(s) with 6 webpart(s)
18 Jun 2024 13:55:36,005 INFO : Loading File Browser config
18 Jun 2024 13:55:36,005 INFO : Done importing File Browser config
18 Jun 2024 13:55:36,006 INFO : Starting Sample Status Data import
18 Jun 2024 13:55:36,006 INFO : No sample types XAR file to process.
18 Jun 2024 13:55:36,006 INFO : Finished importing Sample Status Data
18 Jun 2024 13:55:36,010 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:36,012 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
18 Jun 2024 13:55:36,012 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
18 Jun 2024 13:55:36,013 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
18 Jun 2024 13:55:36,013 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
18 Jun 2024 13:55:36,013 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
18 Jun 2024 13:55:36,014 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo and creating symlinks
18 Jun 2024 13:55:36,018 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles
18 Jun 2024 13:55:36,020 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptC_pr0pr5_finalQuantIons_finalMS1_MS2.R to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptC_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:36,022 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptC_pr0pr5_finalQuantIons_finalMS1_MS2.R targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/skyline_analysis_histoneUb_exptC_pr0pr5_finalQuantIons_finalMS1_MS2.R
18 Jun 2024 13:55:36,024 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_Etopo_6x4p.pdf to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_Etopo_6x4p.pdf
18 Jun 2024 13:55:36,025 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_Etopo_6x4p.pdf targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_Etopo_6x4p.pdf
18 Jun 2024 13:55:36,028 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_etopo_version01_2.csv to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_etopo_version01_2.csv
18 Jun 2024 13:55:36,030 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_etopo_version01_2.csv targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/SupplementaryFiles/ExptC_etopo_version01_2.csv
18 Jun 2024 13:55:36,032 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles
18 Jun 2024 13:55:36,034 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1.raw
18 Jun 2024 13:55:36,036 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1.raw
18 Jun 2024 13:55:36,038 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_L_etopo_100nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_L_etopo_100nM_rep1.raw
18 Jun 2024 13:55:36,039 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_L_etopo_100nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_L_etopo_100nM_rep1.raw
18 Jun 2024 13:55:36,041 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_H_etopo_100nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_H_etopo_100nM_rep3.raw
18 Jun 2024 13:55:36,043 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_H_etopo_100nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_H_etopo_100nM_rep3.raw
18 Jun 2024 13:55:36,045 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1_redo.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1_redo.raw
18 Jun 2024 13:55:36,046 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1_redo.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1_redo.raw
18 Jun 2024 13:55:36,048 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_synthetics_p0pr5.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_synthetics_p0pr5.raw
18 Jun 2024 13:55:36,049 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_synthetics_p0pr5.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_synthetics_p0pr5.raw
18 Jun 2024 13:55:36,051 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_H_etopo_100nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_H_etopo_100nM_rep1.raw
18 Jun 2024 13:55:36,052 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_H_etopo_100nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C05_H_etopo_100nM_rep1.raw
18 Jun 2024 13:55:36,054 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_L_etopo_1000nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_L_etopo_1000nM_rep2.raw
18 Jun 2024 13:55:36,055 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_L_etopo_1000nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_L_etopo_1000nM_rep2.raw
18 Jun 2024 13:55:36,058 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_H_etopo_500nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_H_etopo_500nM_rep2.raw
18 Jun 2024 13:55:36,059 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_H_etopo_500nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_H_etopo_500nM_rep2.raw
18 Jun 2024 13:55:36,061 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1.raw
18 Jun 2024 13:55:36,062 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_L_etopo_ctrl_rep1.raw
18 Jun 2024 13:55:36,065 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_L_etopo_500nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_L_etopo_500nM_rep3.raw
18 Jun 2024 13:55:36,066 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_L_etopo_500nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_L_etopo_500nM_rep3.raw
18 Jun 2024 13:55:36,068 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_L_etopo_500nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_L_etopo_500nM_rep2.raw
18 Jun 2024 13:55:36,069 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_L_etopo_500nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C10_L_etopo_500nM_rep2.raw
18 Jun 2024 13:55:36,072 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_L_etopo_500nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_L_etopo_500nM_rep1.raw
18 Jun 2024 13:55:36,074 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_L_etopo_500nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_L_etopo_500nM_rep1.raw
18 Jun 2024 13:55:36,078 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_H_etopo_ctrl_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_H_etopo_ctrl_rep3.raw
18 Jun 2024 13:55:36,080 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_H_etopo_ctrl_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_H_etopo_ctrl_rep3.raw
18 Jun 2024 13:55:36,082 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_H_etopo_1000nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_H_etopo_1000nM_rep2.raw
18 Jun 2024 13:55:36,083 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_H_etopo_1000nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C14_H_etopo_1000nM_rep2.raw
18 Jun 2024 13:55:36,086 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_L_etopo_1000nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_L_etopo_1000nM_rep1.raw
18 Jun 2024 13:55:36,088 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_L_etopo_1000nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_L_etopo_1000nM_rep1.raw
18 Jun 2024 13:55:36,090 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_H_etopo_1000nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_H_etopo_1000nM_rep3.raw
18 Jun 2024 13:55:36,091 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_H_etopo_1000nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_H_etopo_1000nM_rep3.raw
18 Jun 2024 13:55:36,094 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_H_etopo_500nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_H_etopo_500nM_rep3.raw
18 Jun 2024 13:55:36,096 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_H_etopo_500nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C11_H_etopo_500nM_rep3.raw
18 Jun 2024 13:55:36,098 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_H_etopo_1000nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_H_etopo_1000nM_rep1.raw
18 Jun 2024 13:55:36,099 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_H_etopo_1000nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C13_H_etopo_1000nM_rep1.raw
18 Jun 2024 13:55:36,101 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_L_etopo_1000nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_L_etopo_1000nM_rep3.raw
18 Jun 2024 13:55:36,102 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_L_etopo_1000nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C15_L_etopo_1000nM_rep3.raw
18 Jun 2024 13:55:36,104 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1_redo.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1_redo.raw
18 Jun 2024 13:55:36,106 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1_redo.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C01_H_etopo_ctrl_rep1_redo.raw
18 Jun 2024 13:55:36,108 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_H_etopo_ctrl_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_H_etopo_ctrl_rep2.raw
18 Jun 2024 13:55:36,109 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_H_etopo_ctrl_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_H_etopo_ctrl_rep2.raw
18 Jun 2024 13:55:36,111 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_L_etopo_ctrl_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_L_etopo_ctrl_rep2.raw
18 Jun 2024 13:55:36,113 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_L_etopo_ctrl_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C02_L_etopo_ctrl_rep2.raw
18 Jun 2024 13:55:36,115 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_H_etopo_500nM_rep1.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_H_etopo_500nM_rep1.raw
18 Jun 2024 13:55:36,117 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_H_etopo_500nM_rep1.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C09_H_etopo_500nM_rep1.raw
18 Jun 2024 13:55:36,119 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_L_etopo_100nM_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_L_etopo_100nM_rep3.raw
18 Jun 2024 13:55:36,120 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_L_etopo_100nM_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C07_L_etopo_100nM_rep3.raw
18 Jun 2024 13:55:36,123 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_H_etopo_100nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_H_etopo_100nM_rep2.raw
18 Jun 2024 13:55:36,126 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_H_etopo_100nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_H_etopo_100nM_rep2.raw
18 Jun 2024 13:55:36,128 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_L_etopo_ctrl_rep3.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_L_etopo_ctrl_rep3.raw
18 Jun 2024 13:55:36,129 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_L_etopo_ctrl_rep3.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C03_L_etopo_ctrl_rep3.raw
18 Jun 2024 13:55:36,130 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_L_etopo_100nM_rep2.raw to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_L_etopo_100nM_rep2.raw
18 Jun 2024 13:55:36,131 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_L_etopo_100nM_rep2.raw targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/RawFiles/exptC_C06_L_etopo_100nM_rep2.raw
18 Jun 2024 13:55:36,133 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:36,134 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:36,135 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17
18 Jun 2024 13:55:36,137 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:36,138 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky
18 Jun 2024 13:55:36,140 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky.view to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:36,141 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky.view targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.sky.view
18 Jun 2024 13:55:36,142 DEBUG: Moved file /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd to /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:36,143 DEBUG: Created symlink /data/labkey/files/Case Western Reserve U - Lund Lab/2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd targeting /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:36,145 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/assaydata
18 Jun 2024 13:55:36,146 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo
18 Jun 2024 13:55:36,148 DEBUG: Setting filePathRoot on copied run: 20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files
18 Jun 2024 13:55:36,149 DEBUG: Setting dataFileUri on copied data: 20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17.sky.zip
18 Jun 2024 13:55:36,152 DEBUG: Setting dataFileUri on copied data: 20210304_ExptC_etopo_qe_pr0pr5_v03.skyd to: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo/@files/20210304_ExptC_etopo_qe_pr0pr5_v03_2024-06-18_10-47-17/20210304_ExptC_etopo_qe_pr0pr5_v03.skyd
18 Jun 2024 13:55:36,152 INFO : Done importing folder archive for 6_etopo
18 Jun 2024 13:55:36,152 INFO : Done importing subfolders and container tabs
18 Jun 2024 13:55:36,152 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors and creating symlinks
18 Jun 2024 13:55:36,156 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/@files/RawFiles
18 Jun 2024 13:55:36,156 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors
18 Jun 2024 13:55:36,157 INFO : Done importing folder archive for Fig06_inhibitors
18 Jun 2024 13:55:36,157 INFO : Done importing subfolders and container tabs
18 Jun 2024 13:55:36,158 INFO : Moving files to folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb and creating symlinks
18 Jun 2024 13:55:36,162 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/RawFiles
18 Jun 2024 13:55:36,166 DEBUG: Directory created: /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/assaydata
18 Jun 2024 13:55:36,166 INFO : Aligning data files urls in folder: /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb
18 Jun 2024 13:55:36,166 INFO : Importing files metadata.
18 Jun 2024 13:55:36,166 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export
18 Jun 2024 13:55:36,168 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig01_Synthetic_Spikes]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig01_Synthetic_Spikes
18 Jun 2024 13:55:36,169 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig02_Synthetic_Propionyl]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig02_Synthetic_Propionyl
18 Jun 2024 13:55:36,170 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig03_ms2]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig03_ms2
18 Jun 2024 13:55:36,172 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig04_Isotopes]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig04_Isotopes
18 Jun 2024 13:55:36,172 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig05_H2B_peptide_spike]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig05_H2B_peptide_spike
18 Jun 2024 13:55:36,173 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors
18 Jun 2024 13:55:36,175 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/1_sgRING]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/1_sgRING
18 Jun 2024 13:55:36,175 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/2_pano]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/2_pano
18 Jun 2024 13:55:36,176 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/3_mito]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/3_mito
18 Jun 2024 13:55:36,177 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/4_ActD]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/4_ActD
18 Jun 2024 13:55:36,178 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/5_Ei1]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/5_Ei1
18 Jun 2024 13:55:36,179 DEBUG: [/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/Fig06_inhibitors/6_etopo]  Reading files metadata from /data/labkey/files/Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb/@files/export/subfolders/Fig06_inhibitors/subfolders/6_etopo
18 Jun 2024 13:55:36,180 INFO : 
18 Jun 2024 13:55:36,180 INFO : Experiment import completed successfully.
18 Jun 2024 13:55:36,180 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
18 Jun 2024 13:55:36,199 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
18 Jun 2024 13:55:36,199 INFO : 
18 Jun 2024 13:55:36,199 INFO : Checking for library folders.
18 Jun 2024 13:55:36,209 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
18 Jun 2024 13:55:36,225 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
18 Jun 2024 13:55:36,225 INFO : 
18 Jun 2024 13:55:36,225 INFO : Finishing up experiment copy.
18 Jun 2024 13:55:36,226 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2024/Case Western Reserve U Lund Lab - 2024_HistoneUb
18 Jun 2024 13:55:36,227 INFO : Setting version on new experiment to 1
18 Jun 2024 13:55:36,230 INFO : Updating permanent link to point to the new copy of the data.
18 Jun 2024 13:55:36,289 INFO : Removing copy permissions given to Panorama Public
18 Jun 2024 13:55:36,303 INFO : Adding read permissions to all users that are folder admins in the source folder.
18 Jun 2024 13:55:36,304 INFO : Assigning ReaderRole to pxl446@case.edu
18 Jun 2024 13:55:36,304 INFO : Assigning PanoramaPublicSubmitterRole to pxl446@case.edu
18 Jun 2024 13:55:36,308 INFO : Adding user pxl446@case.edu to group Panorama Public Submitters
18 Jun 2024 13:55:36,309 INFO : Updating the 'Raw Data' tab configuration
18 Jun 2024 13:55:36,315 INFO : Creating a reviewer account.
18 Jun 2024 13:55:36,378 INFO : Created reviewer with email: panorama+reviewer271@proteinms.net
18 Jun 2024 13:55:36,378 INFO : Generating password.
18 Jun 2024 13:55:36,515 INFO : Set reviewer password successfully.
18 Jun 2024 13:55:36,522 INFO : Adding user panorama+reviewer271@proteinms.net to group Reviewers
18 Jun 2024 13:55:36,524 INFO : Hiding the Data Pipeline tab.
18 Jun 2024 13:55:36,567 INFO : Updating Submission. Setting copiedExperimentId to 1850
18 Jun 2024 13:55:43,242 INFO : Assigning a ProteomeXchange ID.
18 Jun 2024 13:55:45,076 INFO : Assigned ProteomeXchange ID: PXD053212
18 Jun 2024 13:55:45,076 INFO : Assigning a DOI.
18 Jun 2024 13:55:45,803 INFO : Assigned DOI: 10.6069/gagw-vh04
18 Jun 2024 13:55:45,963 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'