Copying experiment: Distinct blood protein profiles associated with ileal and colonic ulcers in Crohn’s disease

U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location

Job Status

Created: 2023-09-11 14:16:12
Modified: 2023-09-11 14:17:34
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Copying experiment: Distinct blood protein profiles associated with ileal and colonic ulcers in Crohn’s disease
File Path: /data/labkey/files/Panorama Public/2023/U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location/@files/Experiment_1768.log
Files: Experiment_1768.log
Completed Runs: 01072022_data_statut_lesionnel_PREDIMID_2023-09-08_11-12-53.sky.zip
Minivalidation_SRM_28062021_2023-09-08_11-20-58.sky.zip

Log File


11 Sep 2023 14:16:12,213 INFO : Copying experiment "Distinct blood protein profiles associated with ileal and colonic ulcers in Crohn’s disease" from folder /U of Liege - Translational Gastroenterology Lab/PREDIMID-Crohn's disease location to /Panorama Public/2023/U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location
11 Sep 2023 14:16:12,213 INFO : =======================================
11 Sep 2023 14:16:12,246 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
11 Sep 2023 14:16:12,246 INFO :
11 Sep 2023 14:16:12,246 INFO : Exporting experiment.
11 Sep 2023 14:16:21,235 INFO : Exporting files metadata.
11 Sep 2023 14:16:21,280 INFO :
11 Sep 2023 14:16:21,280 INFO : Experiment export completed successfully.
11 Sep 2023 14:16:21,280 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
11 Sep 2023 14:16:21,301 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
11 Sep 2023 14:16:21,301 INFO :
11 Sep 2023 14:16:21,301 INFO : Importing experiment.
11 Sep 2023 14:16:21,304 INFO : Loading folder properties (folder type, settings and active modules)
11 Sep 2023 14:16:21,360 INFO : Done importing folder properties (folder type, settings and active modules)
11 Sep 2023 14:16:21,361 INFO : Loading container specific module properties
11 Sep 2023 14:16:21,364 INFO : Done importing container specific module properties
11 Sep 2023 14:16:21,365 INFO : Loading etl definitions
11 Sep 2023 14:16:21,366 INFO : Loading wikis
11 Sep 2023 14:16:21,367 INFO : 0 wikis imported
11 Sep 2023 14:16:21,367 INFO : Done importing wikis
11 Sep 2023 14:16:21,368 INFO : Starting Data Class Importer
11 Sep 2023 14:16:21,369 INFO : No types XAR file to process.
11 Sep 2023 14:16:21,369 INFO : Finished Data Class Importer
11 Sep 2023 14:16:21,369 INFO : Starting to copy files
11 Sep 2023 14:16:21,369 INFO : Copied 0 files
11 Sep 2023 14:16:21,369 INFO : Ensuring exp.data rows exist for imported files
11 Sep 2023 14:16:21,419 INFO : Starting Sample Type Importer
11 Sep 2023 14:16:21,420 INFO : No types XAR file to process.
11 Sep 2023 14:16:21,420 INFO : Finished Sample Type Importer
11 Sep 2023 14:16:21,420 INFO : Loading xar
11 Sep 2023 14:16:23,722 INFO : Starting import from 01072022_data_statut_lesionnel_PREDIMID_2023-09-08_11-12-53.sky.zip
11 Sep 2023 14:16:23,724 INFO : Starting to import Skyline document from 01072022_data_statut_lesionnel_PREDIMID_2023-09-08_11-12-53.sky.zip
11 Sep 2023 14:16:23,725 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.blib
11 Sep 2023 14:16:23,788 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.redundant.blib
11 Sep 2023 14:16:24,042 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.skyd
11 Sep 2023 14:16:24,552 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.sky.view
11 Sep 2023 14:16:24,553 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.sky
11 Sep 2023 14:16:24,814 INFO : Expanding 01072022_data_statut_lesionnel_PREDIMID.skyl
11 Sep 2023 14:16:26,342 INFO : Inserting sp|P07996|TSP1_HUMAN
11 Sep 2023 14:16:26,353 INFO : 1% Done
11 Sep 2023 14:16:26,362 WARN : 'Refinement_26032021' library was not found in settings.
11 Sep 2023 14:16:26,567 INFO : Inserting sp|P02751|FINC_HUMAN
11 Sep 2023 14:16:26,579 INFO : 2% Done
11 Sep 2023 14:16:26,795 INFO : 3% Done
11 Sep 2023 14:16:27,003 INFO : Inserting sp|P02675|FIBB_HUMAN
11 Sep 2023 14:16:27,014 INFO : 4% Done
11 Sep 2023 14:16:27,112 INFO : Inserting sp|P08571|CD14_HUMAN
11 Sep 2023 14:16:27,220 INFO : Inserting sp|P59665|DEF1_HUMAN
11 Sep 2023 14:16:27,234 INFO : 5% Done
11 Sep 2023 14:16:27,457 INFO : Inserting sp|P04114|APOB_HUMAN
11 Sep 2023 14:16:27,467 INFO : 6% Done
11 Sep 2023 14:16:27,680 INFO : 7% Done
11 Sep 2023 14:16:27,779 INFO : Inserting sp|P06727|APOA4_HUMAN
11 Sep 2023 14:16:27,894 INFO : 8% Done
11 Sep 2023 14:16:28,094 INFO : Inserting sp|P02741|CRP_HUMAN
11 Sep 2023 14:16:28,106 INFO : 9% Done
11 Sep 2023 14:16:28,228 INFO : Inserting sp|P00738|HPT_HUMAN
11 Sep 2023 14:16:28,366 INFO : 10% Done
11 Sep 2023 14:16:28,574 INFO : Inserting sp|P02763|A1AG1_HUMAN
11 Sep 2023 14:16:28,585 INFO : 11% Done
11 Sep 2023 14:16:28,893 INFO : Inserting sp|P02760|AMBP_HUMAN
11 Sep 2023 14:16:28,903 INFO : 12% Done
11 Sep 2023 14:16:29,114 INFO : Inserting sp|P0DJI8|SAA1_HUMAN
11 Sep 2023 14:16:29,126 INFO : 13% Done
11 Sep 2023 14:16:29,347 INFO : Inserting sp|Q96KN2|CNDP1_HUMAN
11 Sep 2023 14:16:29,358 INFO : 14% Done
11 Sep 2023 14:16:29,586 INFO : Inserting sp|P02750|A2GL_HUMAN
11 Sep 2023 14:16:29,600 INFO : 15% Done
11 Sep 2023 14:16:29,825 INFO : 16% Done
11 Sep 2023 14:16:29,925 INFO : Inserting sp|P29622|KAIN_HUMAN
11 Sep 2023 14:16:30,042 INFO : 17% Done
11 Sep 2023 14:16:30,240 INFO : Inserting sp|P02765|FETUA_HUMAN
11 Sep 2023 14:16:30,250 INFO : 18% Done
11 Sep 2023 14:16:30,453 INFO : Inserting sp|P06312|KV401_HUMAN
11 Sep 2023 14:16:30,464 INFO : 19% Done
11 Sep 2023 14:16:30,669 INFO : 20% Done
11 Sep 2023 14:16:30,766 INFO : Inserting sp|P0CF74|IGLC6_HUMAN
11 Sep 2023 14:16:30,880 INFO : 21% Done
11 Sep 2023 14:16:30,977 INFO : Inserting sp|P04278|SHBG_HUMAN
11 Sep 2023 14:16:31,095 INFO : 22% Done
11 Sep 2023 14:16:31,338 INFO : Inserting sp|P01591|IGJ_HUMAN
11 Sep 2023 14:16:31,352 INFO : 23% Done
11 Sep 2023 14:16:31,581 INFO : 24% Done
11 Sep 2023 14:16:31,783 INFO : Inserting sp|Q06033|ITIH3_HUMAN
11 Sep 2023 14:16:31,898 INFO : 25% Done
11 Sep 2023 14:16:32,106 INFO : Inserting sp|P02647|APOA1_HUMAN
11 Sep 2023 14:16:32,331 INFO : 26% Done
11 Sep 2023 14:16:32,533 INFO : Inserting sp|P02748|CO9_HUMAN
11 Sep 2023 14:16:32,542 INFO : 27% Done
11 Sep 2023 14:16:32,754 INFO : 28% Done
11 Sep 2023 14:16:32,853 INFO : Inserting sp|P01031|CO5_HUMAN
11 Sep 2023 14:16:32,967 INFO : 29% Done
11 Sep 2023 14:16:33,169 INFO : Inserting sp|P01011|AACT_HUMAN
11 Sep 2023 14:16:33,178 INFO : 30% Done
11 Sep 2023 14:16:33,388 INFO : 31% Done
11 Sep 2023 14:16:33,491 INFO : Inserting sp|P11226|MBL2_HUMAN
11 Sep 2023 14:16:33,705 INFO : 32% Done
11 Sep 2023 14:16:33,822 INFO : Inserting sp|P10643|CO7_HUMAN
11 Sep 2023 14:16:33,932 INFO : 33% Done
11 Sep 2023 14:16:34,132 INFO : Inserting sp|P01024|CO3_HUMAN
11 Sep 2023 14:16:34,143 INFO : 34% Done
11 Sep 2023 14:16:34,348 INFO : Inserting sp|P02652|APOA2_HUMAN
11 Sep 2023 14:16:34,357 INFO : 35% Done
11 Sep 2023 14:16:34,454 INFO : Inserting sp|P02655|APOC2_HUMAN
11 Sep 2023 14:16:34,566 INFO : 36% Done
11 Sep 2023 14:16:34,664 INFO : Inserting sp|P02656|APOC3_HUMAN
11 Sep 2023 14:16:34,775 INFO : 37% Done
11 Sep 2023 14:16:34,974 INFO : Inserting sp|P55056|APOC4_HUMAN
11 Sep 2023 14:16:34,985 INFO : 38% Done
11 Sep 2023 14:16:35,183 INFO : Inserting sp|O14791|APOL1_HUMAN
11 Sep 2023 14:16:35,194 INFO : 39% Done
11 Sep 2023 14:16:35,403 INFO : 40% Done
11 Sep 2023 14:16:35,501 INFO : Inserting sp|O75882|ATRN_HUMAN
11 Sep 2023 14:16:35,623 INFO : 41% Done
11 Sep 2023 14:16:35,881 INFO : Inserting sp|P02749|APOH_HUMAN
11 Sep 2023 14:16:35,892 INFO : 42% Done
11 Sep 2023 14:16:36,258 INFO : Inserting sp|P20851|C4BPB_HUMAN
11 Sep 2023 14:16:36,270 INFO : 43% Done
11 Sep 2023 14:16:36,481 INFO : Inserting sp|P22792|CPN2_HUMAN
11 Sep 2023 14:16:36,492 INFO : 44% Done
11 Sep 2023 14:16:36,728 INFO : 45% Done
11 Sep 2023 14:16:36,828 INFO : Inserting sp|P00450|CERU_HUMAN
11 Sep 2023 14:16:36,942 INFO : 46% Done
11 Sep 2023 14:16:37,145 INFO : Inserting sp|P10909|CLUS_HUMAN
11 Sep 2023 14:16:37,156 INFO : 47% Done
11 Sep 2023 14:16:37,388 INFO : 48% Done
11 Sep 2023 14:16:37,593 INFO : Inserting sp|P00740|FA9_HUMAN
11 Sep 2023 14:16:37,605 INFO : 49% Done
11 Sep 2023 14:16:37,815 INFO : 50% Done
11 Sep 2023 14:16:37,931 INFO : Inserting sp|P00742|FA10_HUMAN
11 Sep 2023 14:16:38,074 INFO : 51% Done
11 Sep 2023 14:16:38,297 INFO : Inserting sp|P06681|CO2_HUMAN
11 Sep 2023 14:16:38,307 INFO : 52% Done
11 Sep 2023 14:16:38,522 INFO : 53% Done
11 Sep 2023 14:16:38,727 INFO : Inserting sp|P0C0L5|CO4B_HUMAN
11 Sep 2023 14:16:38,737 INFO : 54% Done
11 Sep 2023 14:16:39,054 INFO : Inserting sp|P13671|CO6_HUMAN
11 Sep 2023 14:16:39,064 INFO : 55% Done
11 Sep 2023 14:16:39,295 INFO : 56% Done
11 Sep 2023 14:16:39,497 INFO : Inserting sp|P07357|CO8A_HUMAN
11 Sep 2023 14:16:39,505 INFO : 57% Done
11 Sep 2023 14:16:39,735 INFO : 58% Done
11 Sep 2023 14:16:39,939 INFO : Inserting sp|P07358|CO8B_HUMAN
11 Sep 2023 14:16:39,950 INFO : 59% Done
11 Sep 2023 14:16:40,170 INFO : Inserting sp|P07360|CO8G_HUMAN
11 Sep 2023 14:16:40,180 INFO : 60% Done
11 Sep 2023 14:16:40,415 INFO : 61% Done
11 Sep 2023 14:16:40,655 INFO : Inserting sp|P00751|CFAB_HUMAN
11 Sep 2023 14:16:40,665 INFO : 62% Done
11 Sep 2023 14:16:40,873 INFO : 63% Done
11 Sep 2023 14:16:40,971 INFO : Inserting sp|P08603|CFAH_HUMAN
11 Sep 2023 14:16:41,085 INFO : 64% Done
11 Sep 2023 14:16:41,184 INFO : Inserting sp|P36980|FHR2_HUMAN
11 Sep 2023 14:16:41,298 INFO : 65% Done
11 Sep 2023 14:16:41,397 INFO : Inserting sp|P05156|CFAI_HUMAN
11 Sep 2023 14:16:41,512 INFO : 66% Done
11 Sep 2023 14:16:41,816 INFO : Inserting sp|O75636|FCN3_HUMAN
11 Sep 2023 14:16:41,827 INFO : 67% Done
11 Sep 2023 14:16:42,032 INFO : Inserting sp|P06396|GELS_HUMAN
11 Sep 2023 14:16:42,043 INFO : 68% Done
11 Sep 2023 14:16:42,249 INFO : 69% Done
11 Sep 2023 14:16:42,468 INFO : Inserting sp|P00739|HPTR_HUMAN
11 Sep 2023 14:16:42,480 INFO : 70% Done
11 Sep 2023 14:16:42,703 INFO : 71% Done
11 Sep 2023 14:16:42,799 INFO : Inserting sp|P05546|HEP2_HUMAN
11 Sep 2023 14:16:42,909 INFO : 72% Done
11 Sep 2023 14:16:43,111 INFO : 73% Done
11 Sep 2023 14:16:43,205 INFO : Inserting sp|P04196|HRG_HUMAN
11 Sep 2023 14:16:43,316 INFO : 74% Done
11 Sep 2023 14:16:43,510 INFO : Inserting sp|P01876|IGHA1_HUMAN
11 Sep 2023 14:16:43,815 INFO : Inserting sp|P01764|HV323_HUMAN
11 Sep 2023 14:16:43,825 INFO : 75% Done
11 Sep 2023 14:16:43,920 INFO : Inserting sp|P35858|ALS_HUMAN
11 Sep 2023 14:16:44,058 INFO : 76% Done
11 Sep 2023 14:16:44,174 INFO : Inserting sp|P19827|ITIH1_HUMAN
11 Sep 2023 14:16:44,286 INFO : 77% Done
11 Sep 2023 14:16:44,483 INFO : Inserting sp|P19823|ITIH2_HUMAN
11 Sep 2023 14:16:44,492 INFO : 78% Done
11 Sep 2023 14:16:44,694 INFO : 79% Done
11 Sep 2023 14:16:44,891 INFO : Inserting sp|P14151|LYAM1_HUMAN
11 Sep 2023 14:16:44,901 INFO : 80% Done
11 Sep 2023 14:16:45,095 INFO : Inserting sp|P51884|LUM_HUMAN
11 Sep 2023 14:16:45,104 INFO : 81% Done
11 Sep 2023 14:16:45,305 INFO : 82% Done
11 Sep 2023 14:16:45,400 INFO : Inserting sp|O00187|MASP2_HUMAN
11 Sep 2023 14:16:45,526 INFO : Inserting sp|P36955|PEDF_HUMAN
11 Sep 2023 14:16:45,536 INFO : 83% Done
11 Sep 2023 14:16:45,763 INFO : 84% Done
11 Sep 2023 14:16:45,961 INFO : Inserting sp|P05155|IC1_HUMAN
11 Sep 2023 14:16:46,074 INFO : 85% Done
11 Sep 2023 14:16:46,292 INFO : Inserting sp|P00747|PLMN_HUMAN
11 Sep 2023 14:16:46,303 INFO : 86% Done
11 Sep 2023 14:16:46,505 INFO : 87% Done
11 Sep 2023 14:16:46,732 INFO : Inserting sp|P20742|PZP_HUMAN
11 Sep 2023 14:16:46,742 INFO : 88% Done
11 Sep 2023 14:16:46,989 INFO : 89% Done
11 Sep 2023 14:16:47,108 INFO : Inserting sp|P02787|TRFE_HUMAN
11 Sep 2023 14:16:47,244 INFO : 90% Done
11 Sep 2023 14:16:47,452 INFO : Inserting sp|P35542|SAA4_HUMAN
11 Sep 2023 14:16:47,464 INFO : 91% Done
11 Sep 2023 14:16:47,719 INFO : Inserting sp|P02743|SAMP_HUMAN
11 Sep 2023 14:16:47,729 INFO : 92% Done
11 Sep 2023 14:16:47,945 INFO : 93% Done
11 Sep 2023 14:16:48,044 INFO : Inserting sp|P05452|TETN_HUMAN
11 Sep 2023 14:16:48,159 INFO : 94% Done
11 Sep 2023 14:16:48,367 INFO : 95% Done
11 Sep 2023 14:16:48,467 INFO : Inserting sp|P05543|THBG_HUMAN
11 Sep 2023 14:16:48,587 INFO : 96% Done
11 Sep 2023 14:16:48,705 INFO : Inserting sp|P04004|VTNC_HUMAN
11 Sep 2023 14:16:48,828 INFO : 97% Done
11 Sep 2023 14:16:49,039 INFO : 98% Done
11 Sep 2023 14:16:49,134 INFO : Inserting sp|P00924|ENO1_YEAST
11 Sep 2023 14:16:49,241 INFO : Done parsing Skyline document.
11 Sep 2023 14:17:03,357 INFO : Creating and populating temp tables for Proportion values
11 Sep 2023 14:17:03,609 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
11 Sep 2023 14:17:04,575 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
11 Sep 2023 14:17:04,908 INFO : Cleaning up temp tables
11 Sep 2023 14:17:05,225 INFO : Completed import of Skyline document from 01072022_data_statut_lesionnel_PREDIMID_2023-09-08_11-12-53.sky.zip
11 Sep 2023 14:17:05,227 INFO : 100% Done
11 Sep 2023 14:17:05,233 INFO : Starting import from Minivalidation_SRM_28062021_2023-09-08_11-20-58.sky.zip
11 Sep 2023 14:17:05,235 INFO : Starting to import Skyline document from Minivalidation_SRM_28062021_2023-09-08_11-20-58.sky.zip
11 Sep 2023 14:17:05,236 INFO : Expanding Minivalidation_SRM_28062021.blib
11 Sep 2023 14:17:05,301 INFO : Expanding Minivalidation_SRM_28062021.redundant.blib
11 Sep 2023 14:17:05,553 INFO : Expanding Minivalidation_SRM_28062021.skyd
11 Sep 2023 14:17:05,600 INFO : Expanding Minivalidation_SRM_28062021.sky.view
11 Sep 2023 14:17:05,602 INFO : Expanding Minivalidation_SRM_28062021.sky
11 Sep 2023 14:17:05,613 INFO : Expanding Minivalidation_SRM_28062021.skyl
11 Sep 2023 14:17:05,648 INFO : 2% Done
11 Sep 2023 14:17:05,907 INFO : Inserting sp|P07996|TSP1_HUMAN
11 Sep 2023 14:17:05,912 INFO : 3% Done
11 Sep 2023 14:17:05,914 WARN : 'Refinement_26032021' library was not found in settings.
11 Sep 2023 14:17:05,941 INFO : Inserting sp|P02751|FINC_HUMAN
11 Sep 2023 14:17:05,945 INFO : 4% Done
11 Sep 2023 14:17:05,987 INFO : 5% Done
11 Sep 2023 14:17:06,000 INFO : Inserting sp|P02675|FIBB_HUMAN
11 Sep 2023 14:17:06,016 INFO : Inserting sp|P08571|CD14_HUMAN
11 Sep 2023 14:17:06,020 INFO : 6% Done
11 Sep 2023 14:17:06,033 INFO : Inserting sp|P59665|DEF1_HUMAN
11 Sep 2023 14:17:06,053 INFO : 7% Done
11 Sep 2023 14:17:06,066 INFO : Inserting sp|P04114|APOB_HUMAN
11 Sep 2023 14:17:06,070 INFO : 8% Done
11 Sep 2023 14:17:06,110 INFO : 9% Done
11 Sep 2023 14:17:06,110 INFO : Inserting sp|P06727|APOA4_HUMAN
11 Sep 2023 14:17:06,140 INFO : 10% Done
11 Sep 2023 14:17:06,153 INFO : Inserting sp|P02741|CRP_HUMAN
11 Sep 2023 14:17:06,171 INFO : Inserting sp|P00738|HPT_HUMAN
11 Sep 2023 14:17:06,175 INFO : 11% Done
11 Sep 2023 14:17:06,208 INFO : 12% Done
11 Sep 2023 14:17:06,221 INFO : Inserting sp|P02763|A1AG1_HUMAN
11 Sep 2023 14:17:06,238 INFO : 13% Done
11 Sep 2023 14:17:06,265 INFO : Inserting sp|P02760|AMBP_HUMAN
11 Sep 2023 14:17:06,268 INFO : 14% Done
11 Sep 2023 14:17:06,295 INFO : Inserting sp|P0DJI8|SAA1_HUMAN
11 Sep 2023 14:17:06,299 INFO : 15% Done
11 Sep 2023 14:17:06,328 INFO : Inserting sp|Q96KN2|CNDP1_HUMAN
11 Sep 2023 14:17:06,331 INFO : 16% Done
11 Sep 2023 14:17:06,361 INFO : Inserting sp|P02750|A2GL_HUMAN
11 Sep 2023 14:17:06,365 INFO : 17% Done
11 Sep 2023 14:17:06,408 INFO : 18% Done
11 Sep 2023 14:17:06,408 INFO : Inserting sp|P29622|KAIN_HUMAN
11 Sep 2023 14:17:06,438 INFO : 19% Done
11 Sep 2023 14:17:06,451 INFO : Inserting sp|P02765|FETUA_HUMAN
11 Sep 2023 14:17:06,469 INFO : 20% Done
11 Sep 2023 14:17:06,482 INFO : Inserting sp|P06312|KV401_HUMAN
11 Sep 2023 14:17:06,499 INFO : 21% Done
11 Sep 2023 14:17:06,525 INFO : Inserting sp|P0CF74|IGLC6_HUMAN
11 Sep 2023 14:17:06,529 INFO : 22% Done
11 Sep 2023 14:17:06,556 INFO : Inserting sp|P04278|SHBG_HUMAN
11 Sep 2023 14:17:06,574 INFO : 23% Done
11 Sep 2023 14:17:06,591 INFO : 24% Done
11 Sep 2023 14:17:06,605 INFO : Inserting sp|P01591|IGJ_HUMAN
11 Sep 2023 14:17:06,639 INFO : 25% Done
11 Sep 2023 14:17:06,666 INFO : Inserting sp|Q06033|ITIH3_HUMAN
11 Sep 2023 14:17:06,697 INFO : 26% Done
11 Sep 2023 14:17:06,710 INFO : Inserting sp|P02647|APOA1_HUMAN
11 Sep 2023 14:17:06,727 INFO : 27% Done
11 Sep 2023 14:17:06,754 INFO : 28% Done
11 Sep 2023 14:17:06,767 INFO : Inserting sp|P02748|CO9_HUMAN
11 Sep 2023 14:17:06,799 INFO : 29% Done
11 Sep 2023 14:17:06,811 INFO : Inserting sp|P01031|CO5_HUMAN
11 Sep 2023 14:17:06,828 INFO : 30% Done
11 Sep 2023 14:17:06,853 INFO : Inserting sp|P01011|AACT_HUMAN
11 Sep 2023 14:17:06,857 INFO : 31% Done
11 Sep 2023 14:17:06,885 INFO : 32% Done
11 Sep 2023 14:17:06,898 INFO : Inserting sp|P11226|MBL2_HUMAN
11 Sep 2023 14:17:06,916 INFO : 33% Done
11 Sep 2023 14:17:06,946 INFO : Inserting sp|P10643|CO7_HUMAN
11 Sep 2023 14:17:06,950 INFO : 34% Done
11 Sep 2023 14:17:06,978 INFO : 35% Done
11 Sep 2023 14:17:06,991 INFO : Inserting sp|P01024|CO3_HUMAN
11 Sep 2023 14:17:07,023 INFO : 36% Done
11 Sep 2023 14:17:07,023 INFO : Inserting sp|P02652|APOA2_HUMAN
11 Sep 2023 14:17:07,039 INFO : Inserting sp|P02655|APOC2_HUMAN
11 Sep 2023 14:17:07,057 INFO : 37% Done
11 Sep 2023 14:17:07,070 INFO : Inserting sp|P02656|APOC3_HUMAN
11 Sep 2023 14:17:07,087 INFO : 38% Done
11 Sep 2023 14:17:07,114 INFO : Inserting sp|P55056|APOC4_HUMAN
11 Sep 2023 14:17:07,117 INFO : 39% Done
11 Sep 2023 14:17:07,143 INFO : Inserting sp|O14791|APOL1_HUMAN
11 Sep 2023 14:17:07,146 INFO : 40% Done
11 Sep 2023 14:17:07,174 INFO : 41% Done
11 Sep 2023 14:17:07,187 INFO : Inserting sp|O75882|ATRN_HUMAN
11 Sep 2023 14:17:07,205 INFO : 42% Done
11 Sep 2023 14:17:07,235 INFO : Inserting sp|P02749|APOH_HUMAN
11 Sep 2023 14:17:07,239 INFO : 43% Done
11 Sep 2023 14:17:07,278 INFO : Inserting sp|P20851|C4BPB_HUMAN
11 Sep 2023 14:17:07,281 INFO : 44% Done
11 Sep 2023 14:17:07,307 INFO : Inserting sp|P22792|CPN2_HUMAN
11 Sep 2023 14:17:07,310 INFO : 45% Done
11 Sep 2023 14:17:07,340 INFO : 46% Done
11 Sep 2023 14:17:07,352 INFO : Inserting sp|P00450|CERU_HUMAN
11 Sep 2023 14:17:07,370 INFO : 47% Done
11 Sep 2023 14:17:07,396 INFO : Inserting sp|P10909|CLUS_HUMAN
11 Sep 2023 14:17:07,399 INFO : 48% Done
11 Sep 2023 14:17:07,429 INFO : 49% Done
11 Sep 2023 14:17:07,454 INFO : Inserting sp|P00740|FA9_HUMAN
11 Sep 2023 14:17:07,458 INFO : 50% Done
11 Sep 2023 14:17:07,485 INFO : 51% Done
11 Sep 2023 14:17:07,501 INFO : Inserting sp|P00742|FA10_HUMAN
11 Sep 2023 14:17:07,521 INFO : 52% Done
11 Sep 2023 14:17:07,548 INFO : Inserting sp|P06681|CO2_HUMAN
11 Sep 2023 14:17:07,552 INFO : 53% Done
11 Sep 2023 14:17:07,592 INFO : 54% Done
11 Sep 2023 14:17:07,605 INFO : Inserting sp|P0C0L5|CO4B_HUMAN
11 Sep 2023 14:17:07,622 INFO : 55% Done
11 Sep 2023 14:17:07,647 INFO : Inserting sp|P13671|CO6_HUMAN
11 Sep 2023 14:17:07,651 INFO : 56% Done
11 Sep 2023 14:17:07,681 INFO : 57% Done
11 Sep 2023 14:17:07,708 INFO : Inserting sp|P07357|CO8A_HUMAN
11 Sep 2023 14:17:07,711 INFO : 58% Done
11 Sep 2023 14:17:07,741 INFO : 59% Done
11 Sep 2023 14:17:07,766 INFO : Inserting sp|P07358|CO8B_HUMAN
11 Sep 2023 14:17:07,770 INFO : 60% Done
11 Sep 2023 14:17:07,799 INFO : Inserting sp|P07360|CO8G_HUMAN
11 Sep 2023 14:17:07,802 INFO : 61% Done
11 Sep 2023 14:17:07,836 INFO : 62% Done
11 Sep 2023 14:17:07,866 INFO : Inserting sp|P00751|CFAB_HUMAN
11 Sep 2023 14:17:07,870 INFO : 63% Done
11 Sep 2023 14:17:07,910 INFO : 64% Done
11 Sep 2023 14:17:07,910 INFO : Inserting sp|P08603|CFAH_HUMAN
11 Sep 2023 14:17:07,939 INFO : Inserting sp|P36980|FHR2_HUMAN
11 Sep 2023 14:17:07,942 INFO : 65% Done
11 Sep 2023 14:17:07,969 INFO : Inserting sp|P05156|CFAI_HUMAN
11 Sep 2023 14:17:07,972 INFO : 66% Done
11 Sep 2023 14:17:08,000 INFO : 67% Done
11 Sep 2023 14:17:08,026 INFO : Inserting sp|O75636|FCN3_HUMAN
11 Sep 2023 14:17:08,030 INFO : 68% Done
11 Sep 2023 14:17:08,055 INFO : Inserting sp|P06396|GELS_HUMAN
11 Sep 2023 14:17:08,058 INFO : 69% Done
11 Sep 2023 14:17:08,099 INFO : 70% Done
11 Sep 2023 14:17:08,114 INFO : Inserting sp|P00739|HPTR_HUMAN
11 Sep 2023 14:17:08,133 INFO : 71% Done
11 Sep 2023 14:17:08,159 INFO : Inserting sp|P05546|HEP2_HUMAN
11 Sep 2023 14:17:08,163 INFO : 72% Done
11 Sep 2023 14:17:08,190 INFO : 73% Done
11 Sep 2023 14:17:08,216 INFO : Inserting sp|P04196|HRG_HUMAN
11 Sep 2023 14:17:08,220 INFO : 74% Done
11 Sep 2023 14:17:08,258 INFO : Inserting sp|P01876|IGHA1_HUMAN
11 Sep 2023 14:17:08,289 INFO : 75% Done
11 Sep 2023 14:17:08,301 INFO : Inserting sp|P01764|HV323_HUMAN
11 Sep 2023 14:17:08,318 INFO : Inserting sp|P35858|ALS_HUMAN
11 Sep 2023 14:17:08,321 INFO : 76% Done
11 Sep 2023 14:17:08,353 INFO : 77% Done
11 Sep 2023 14:17:08,353 INFO : Inserting sp|P19827|ITIH1_HUMAN
11 Sep 2023 14:17:08,383 INFO : 78% Done
11 Sep 2023 14:17:08,395 INFO : Inserting sp|P19823|ITIH2_HUMAN
11 Sep 2023 14:17:08,412 INFO : 79% Done
11 Sep 2023 14:17:08,439 INFO : 80% Done
11 Sep 2023 14:17:08,452 INFO : Inserting sp|P14151|LYAM1_HUMAN
11 Sep 2023 14:17:08,468 INFO : 81% Done
11 Sep 2023 14:17:08,481 INFO : Inserting sp|P51884|LUM_HUMAN
11 Sep 2023 14:17:08,511 INFO : 82% Done
11 Sep 2023 14:17:08,523 INFO : Inserting sp|O00187|MASP2_HUMAN
11 Sep 2023 14:17:08,542 INFO : 83% Done
11 Sep 2023 14:17:08,542 INFO : Inserting sp|P36955|PEDF_HUMAN
11 Sep 2023 14:17:08,572 INFO : 84% Done
11 Sep 2023 14:17:08,597 INFO : Inserting sp|P05155|IC1_HUMAN
11 Sep 2023 14:17:08,601 INFO : 85% Done
11 Sep 2023 14:17:08,633 INFO : 86% Done
11 Sep 2023 14:17:08,645 INFO : Inserting sp|P00747|PLMN_HUMAN
11 Sep 2023 14:17:08,663 INFO : 87% Done
11 Sep 2023 14:17:08,690 INFO : 88% Done
11 Sep 2023 14:17:08,702 INFO : Inserting sp|P20742|PZP_HUMAN
11 Sep 2023 14:17:08,720 INFO : 89% Done
11 Sep 2023 14:17:08,751 INFO : Inserting sp|P02787|TRFE_HUMAN
11 Sep 2023 14:17:08,754 INFO : 90% Done
11 Sep 2023 14:17:08,784 INFO : 91% Done
11 Sep 2023 14:17:08,796 INFO : Inserting sp|P35542|SAA4_HUMAN
11 Sep 2023 14:17:08,814 INFO : 92% Done
11 Sep 2023 14:17:08,831 INFO : Inserting sp|P02743|SAMP_HUMAN
11 Sep 2023 14:17:08,848 INFO : 93% Done
11 Sep 2023 14:17:08,873 INFO : Inserting sp|P05452|TETN_HUMAN
11 Sep 2023 14:17:08,890 INFO : 94% Done
11 Sep 2023 14:17:08,918 INFO : 95% Done
11 Sep 2023 14:17:08,930 INFO : Inserting sp|P05543|THBG_HUMAN
11 Sep 2023 14:17:08,947 INFO : 96% Done
11 Sep 2023 14:17:08,962 INFO : Inserting sp|P04004|VTNC_HUMAN
11 Sep 2023 14:17:08,979 INFO : 97% Done
11 Sep 2023 14:17:09,006 INFO : 98% Done
11 Sep 2023 14:17:09,019 INFO : Inserting sp|P00924|ENO1_YEAST
11 Sep 2023 14:17:09,036 INFO : Done parsing Skyline document.
11 Sep 2023 14:17:22,660 INFO : Creating and populating temp tables for Proportion values
11 Sep 2023 14:17:22,755 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
11 Sep 2023 14:17:22,849 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
11 Sep 2023 14:17:22,883 INFO : Cleaning up temp tables
11 Sep 2023 14:17:23,165 INFO : Completed import of Skyline document from Minivalidation_SRM_28062021_2023-09-08_11-20-58.sky.zip
11 Sep 2023 14:17:23,167 INFO : 100% Done
11 Sep 2023 14:17:23,179 INFO : Done importing xar
11 Sep 2023 14:17:23,181 INFO : Loading pages and webpart properties
11 Sep 2023 14:17:23,240 INFO : Done importing 3 page(s) with 5 webpart(s)
11 Sep 2023 14:17:23,240 INFO : Loading File Browser config
11 Sep 2023 14:17:23,240 INFO : Done importing File Browser config
11 Sep 2023 14:17:23,241 INFO : Starting Sample Status Data import
11 Sep 2023 14:17:23,241 INFO : No sample types XAR file to process.
11 Sep 2023 14:17:23,241 INFO : Finished importing Sample Status Data
11 Sep 2023 14:17:23,245 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
11 Sep 2023 14:17:23,247 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
11 Sep 2023 14:17:23,247 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
11 Sep 2023 14:17:23,248 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
11 Sep 2023 14:17:23,248 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
11 Sep 2023 14:17:23,248 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
11 Sep 2023 14:17:23,250 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
11 Sep 2023 14:17:23,257 INFO : Moving files to folder /Panorama Public/2023/U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location and creating symlinks
11 Sep 2023 14:17:24,279 INFO : Aligning data files urls in folder: /Panorama Public/2023/U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location
11 Sep 2023 14:17:24,291 INFO : Importing files metadata.
11 Sep 2023 14:17:24,292 INFO :
11 Sep 2023 14:17:24,292 INFO : Experiment import completed successfully.
11 Sep 2023 14:17:24,292 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
11 Sep 2023 14:17:31,023 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
11 Sep 2023 14:17:31,023 INFO :
11 Sep 2023 14:17:31,023 INFO : Checking for library folders.
11 Sep 2023 14:17:31,025 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
11 Sep 2023 14:17:31,040 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
11 Sep 2023 14:17:31,040 INFO :
11 Sep 2023 14:17:31,040 INFO : Finishing up experiment copy.
11 Sep 2023 14:17:31,041 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2023/U of Liege Translational Gastroenterology Lab - PREDIMID-Crohn's disease location
11 Sep 2023 14:17:31,042 INFO : Setting version on new experiment to 1
11 Sep 2023 14:17:31,044 INFO : Updating permanent link to point to the new copy of the data.
11 Sep 2023 14:17:31,047 INFO : Removing copy permissions given to Panorama Public
11 Sep 2023 14:17:31,056 INFO : Adding read permissions to all users that are folder admins in the source folder.
11 Sep 2023 14:17:31,057 INFO : Assigning ReaderRole to nicolas.pierre@uliege.be
11 Sep 2023 14:17:31,057 INFO : Assigning PanoramaPublicSubmitterRole to nicolas.pierre@uliege.be
11 Sep 2023 14:17:31,066 INFO : User nicolas.pierre@uliege.be is already a member of group Panorama Public Submitters
11 Sep 2023 14:17:31,066 INFO : Updating the 'Raw Data' tab configuration
11 Sep 2023 14:17:31,067 INFO : Creating a reviewer account.
11 Sep 2023 14:17:31,258 INFO : Created reviewer with email: User panorama+reviewer211@proteinms.net
11 Sep 2023 14:17:31,271 INFO : Adding user panorama+reviewer211@proteinms.net to group Reviewers
11 Sep 2023 14:17:31,273 INFO : Hiding the Data Pipeline tab.
11 Sep 2023 14:17:31,277 INFO : Updating Submission. Setting copiedExperimentId to 1687
11 Sep 2023 14:17:32,966 INFO : Assigning a ProteomeXchange ID.
11 Sep 2023 14:17:33,465 INFO : Assigned ProteomeXchange ID: PXD045278
11 Sep 2023 14:17:33,465 INFO : Assigning a DOI.
11 Sep 2023 14:17:34,289 INFO : Assigned DOI: 10.6069/wcd9-as05
11 Sep 2023 14:17:34,349 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'