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Validating data for experiment Id: 1749, validation Id: 733

U of Heidelberg Mass Spec Core - Sakson_Beedgen_et_al_MRM

Job Status

Created: 2023-12-22 01:19:49
Modified: 2023-12-22 01:19:49
Email: vsharma@uw.edu
Status: COMPLETE
Info:
Description: Validating data for experiment Id: 1749, validation Id: 733
File Path: /data/labkey/files/Panorama Public/2023/U of Heidelberg Mass Spec Core - Sakson_Beedgen_et_al_MRM/@files/Experiment_Validation_1837_2023-12-22_01-19-49.log
Files: Experiment_Validation_1837_2023-12-22_01-19-49.log
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Log File


22 Dec 2023 01:19:49,749 INFO : Validating data for a ProteomeXchange submission.
22 Dec 2023 01:19:49,750 INFO : =======================================
22 Dec 2023 01:19:49,791 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
22 Dec 2023 01:19:49,792 INFO : Validating data for experiment Id: 1749, validation Id: 733
22 Dec 2023 01:19:49,816 INFO : Validating data for 6 Skyline documents in 2 folders
22 Dec 2023 01:19:49,823 INFO : Sample file validation for Skyline document: 173_peptides_iRTs_chromatogram_library_2023-12-22_00-47-19.sky.zip
22 Dec 2023 01:19:49,823 INFO :   Found all sample files.
22 Dec 2023 01:19:49,846 INFO : Sample file validation for Skyline document: Figures_3_and_S3_HEK_293T_Fibroblasts_HeLa_2023-12-22_01-03-03.sky.zip
22 Dec 2023 01:19:49,846 INFO :   Found all sample files.
22 Dec 2023 01:19:49,851 INFO : Sample file validation for Skyline document: Figure_9_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-53-52.sky.zip
22 Dec 2023 01:19:49,851 INFO :   Found all sample files.
22 Dec 2023 01:19:49,857 INFO : Sample file validation for Skyline document: Figure_S5_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-59-41.sky.zip
22 Dec 2023 01:19:49,857 INFO :   Found all sample files.
22 Dec 2023 01:19:49,898 INFO : Sample file validation for Skyline document: Figures_4_5_6_7_8A_Heidelberg_CDG-Patients_2023-12-22_02-32-43.sky.zip
22 Dec 2023 01:19:49,898 INFO :   Found all sample files.
22 Dec 2023 01:19:49,905 INFO : Sample file validation for Skyline document: Figure_8B_Freiburg_ALG1-CDG-Patients_Comparison_2023-12-22_02-34-55.sky.zip
22 Dec 2023 01:19:49,905 INFO :   Found all sample files.
22 Dec 2023 01:19:49,939 INFO : Modifications validation:
22 Dec 2023 01:19:49,939 INFO : VALID MODIFICATIONS:
22 Dec 2023 01:19:49,939 INFO : 5518: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
22 Dec 2023 01:19:49,939 INFO :     Figures_3_and_S3_HEK_293T_Fibroblasts_HeLa_2023-12-22_01-03-03.sky.zip
22 Dec 2023 01:19:49,939 INFO :     Figure_9_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-53-52.sky.zip
22 Dec 2023 01:19:49,939 INFO :     Figure_8B_Freiburg_ALG1-CDG-Patients_Comparison_2023-12-22_02-34-55.sky.zip
22 Dec 2023 01:19:49,940 INFO :     173_peptides_iRTs_chromatogram_library_2023-12-22_00-47-19.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figures_4_5_6_7_8A_Heidelberg_CDG-Patients_2023-12-22_02-32-43.sky.zip
22 Dec 2023 01:19:49,940 INFO : 5519: Label:13C(6)15N(2) (C-term K): 
22 Dec 2023 01:19:49,940 INFO :     Figures_3_and_S3_HEK_293T_Fibroblasts_HeLa_2023-12-22_01-03-03.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_9_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-53-52.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_8B_Freiburg_ALG1-CDG-Patients_Comparison_2023-12-22_02-34-55.sky.zip
22 Dec 2023 01:19:49,940 INFO :     173_peptides_iRTs_chromatogram_library_2023-12-22_00-47-19.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_S5_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-59-41.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figures_4_5_6_7_8A_Heidelberg_CDG-Patients_2023-12-22_02-32-43.sky.zip
22 Dec 2023 01:19:49,940 INFO : 5520: Label:13C(6)15N(4) (C-term R): 
22 Dec 2023 01:19:49,940 INFO :     Figures_3_and_S3_HEK_293T_Fibroblasts_HeLa_2023-12-22_01-03-03.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_9_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-53-52.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_8B_Freiburg_ALG1-CDG-Patients_Comparison_2023-12-22_02-34-55.sky.zip
22 Dec 2023 01:19:49,940 INFO :     173_peptides_iRTs_chromatogram_library_2023-12-22_00-47-19.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figure_S5_Freiburg_ALG11_I-CDG_Natural_Variant_2023-12-22_01-59-41.sky.zip
22 Dec 2023 01:19:49,940 INFO :     Figures_4_5_6_7_8A_Heidelberg_CDG-Patients_2023-12-22_02-32-43.sky.zip
22 Dec 2023 01:19:49,941 INFO : INVALID MODIFICATIONS (No Unimod ID):
22 Dec 2023 01:19:49,942 INFO : Skyline documents in the experiment do not contain any spectral libraries.
22 Dec 2023 01:19:49,942 INFO : Spectral library validation complete.
22 Dec 2023 01:19:49,942 INFO : Data validation is complete. Status is Complete
22 Dec 2023 01:19:49,942 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'