Created: | 2023-08-08 13:50:38 | ||
Modified: | 2023-08-08 13:52:15 | ||
Email: | vsharma@uw.edu | ||
Status: | COMPLETE | ||
Info: | |||
Description: | Copying experiment: Validation of a proteomic signature of lung cancer risk from bronchial specimens of risk-stratified individuals | ||
File Path: | /data/labkey/files/Panorama Public/2023/PNNL - Signature_of_lung_cancer_risk/@files/Experiment_1729.log | ||
Files: |
Experiment_1729.log |
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Join job: |
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Split jobs: |
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Completed Runs: |
Batch2_01_2023-08-07_12-21-56.sky.zip Batch2_02_2023-08-07_12-25-16.sky.zip Batch2_03_2023-08-07_12-27-19.sky.zip Batch1_Biopsy_2023-08-07_12-08-20.sky.zip Batch1_Brushing_2023-08-07_14-38-16.sky.zip |
08 Aug 2023 13:50:38,461 INFO : Copying experiment "Validation of a proteomic signature of lung cancer risk from bronchial specimens of risk-stratified individuals" from folder /PNNL/Signature_of_lung_cancer_risk to /Panorama Public/2023/PNNL - Signature_of_lung_cancer_risk
08 Aug 2023 13:50:38,461 INFO : =======================================
08 Aug 2023 13:50:38,492 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
08 Aug 2023 13:50:38,492 INFO :
08 Aug 2023 13:50:38,492 INFO : Exporting experiment.
08 Aug 2023 13:51:20,359 INFO : Exporting files metadata.
08 Aug 2023 13:51:20,361 INFO :
08 Aug 2023 13:51:20,361 INFO : Experiment export completed successfully.
08 Aug 2023 13:51:20,361 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
08 Aug 2023 13:51:20,385 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
08 Aug 2023 13:51:20,385 INFO :
08 Aug 2023 13:51:20,385 INFO : Importing experiment.
08 Aug 2023 13:51:20,388 INFO : Loading folder properties (folder type, settings and active modules)
08 Aug 2023 13:51:20,438 INFO : Done importing folder properties (folder type, settings and active modules)
08 Aug 2023 13:51:20,439 INFO : Loading container specific module properties
08 Aug 2023 13:51:20,443 INFO : Done importing container specific module properties
08 Aug 2023 13:51:20,444 INFO : Loading etl definitions
08 Aug 2023 13:51:20,445 INFO : Loading wikis
08 Aug 2023 13:51:20,446 INFO : 0 wikis imported
08 Aug 2023 13:51:20,446 INFO : Done importing wikis
08 Aug 2023 13:51:20,447 INFO : Starting Data Class Importer
08 Aug 2023 13:51:20,447 INFO : No types XAR file to process.
08 Aug 2023 13:51:20,447 INFO : Finished Data Class Importer
08 Aug 2023 13:51:20,448 INFO : Starting to copy files
08 Aug 2023 13:51:20,448 INFO : Copied 0 files
08 Aug 2023 13:51:20,448 INFO : Ensuring exp.data rows exist for imported files
08 Aug 2023 13:51:20,498 INFO : Starting Sample Type Importer
08 Aug 2023 13:51:20,498 INFO : No types XAR file to process.
08 Aug 2023 13:51:20,498 INFO : Finished Sample Type Importer
08 Aug 2023 13:51:20,499 INFO : Loading xar
08 Aug 2023 13:51:30,591 INFO : Starting import from Batch1_Biopsy_2023-08-07_12-08-20.sky.zip
08 Aug 2023 13:51:30,595 INFO : Starting to import Skyline document from Batch1_Biopsy_2023-08-07_12-08-20.sky.zip
08 Aug 2023 13:51:30,596 INFO : Expanding Batch1_Biopsy.skyd
08 Aug 2023 13:51:30,807 INFO : Expanding Batch1_Biopsy.sky.view
08 Aug 2023 13:51:30,813 INFO : Expanding Batch1_Biopsy.sky
08 Aug 2023 13:51:30,955 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
08 Aug 2023 13:51:31,472 INFO : Inserting EGFR_HUMAN
08 Aug 2023 13:51:31,478 INFO : 2% Done
08 Aug 2023 13:51:31,542 INFO : Inserting IDH1_HUMAN
08 Aug 2023 13:51:31,547 INFO : 3% Done
08 Aug 2023 13:51:31,599 INFO : 4% Done
08 Aug 2023 13:51:31,650 INFO : Inserting NFKB1_HUMAN
08 Aug 2023 13:51:31,655 INFO : 5% Done
08 Aug 2023 13:51:31,710 INFO : 6% Done
08 Aug 2023 13:51:31,749 INFO : Inserting ANXA2_HUMAN
08 Aug 2023 13:51:31,753 INFO : 7% Done
08 Aug 2023 13:51:31,758 WARN : 'Batch1_Brushing' library was not found in settings.
08 Aug 2023 13:51:31,793 INFO : Inserting 1433F_HUMAN
08 Aug 2023 13:51:31,798 INFO : 8% Done
08 Aug 2023 13:51:31,851 INFO : 9% Done
08 Aug 2023 13:51:31,901 INFO : Inserting 1433S_HUMAN
08 Aug 2023 13:51:31,905 INFO : 10% Done
08 Aug 2023 13:51:31,948 INFO : 11% Done
08 Aug 2023 13:51:31,987 INFO : Inserting 6PGD_HUMAN
08 Aug 2023 13:51:31,992 INFO : 12% Done
08 Aug 2023 13:51:32,044 INFO : 13% Done
08 Aug 2023 13:51:32,092 INFO : Inserting ACLY_HUMAN
08 Aug 2023 13:51:32,097 INFO : 14% Done
08 Aug 2023 13:51:32,144 INFO : Inserting ACSF3_HUMAN
08 Aug 2023 13:51:32,149 INFO : 15% Done
08 Aug 2023 13:51:32,202 INFO : 17% Done
08 Aug 2023 13:51:32,249 INFO : Inserting AK1BA_HUMAN
08 Aug 2023 13:51:32,254 INFO : 18% Done
08 Aug 2023 13:51:32,306 INFO : 19% Done
08 Aug 2023 13:51:32,354 INFO : Inserting AL1A1_HUMAN
08 Aug 2023 13:51:32,359 INFO : 20% Done
08 Aug 2023 13:51:32,415 INFO : 21% Done
08 Aug 2023 13:51:32,464 INFO : Inserting AL3A1_HUMAN
08 Aug 2023 13:51:32,469 INFO : 22% Done
08 Aug 2023 13:51:32,522 INFO : 24% Done
08 Aug 2023 13:51:32,569 INFO : Inserting ANM1_HUMAN
08 Aug 2023 13:51:32,574 INFO : 25% Done
08 Aug 2023 13:51:32,622 INFO : Inserting ANXA3_HUMAN
08 Aug 2023 13:51:32,682 INFO : 26% Done
08 Aug 2023 13:51:32,730 INFO : Inserting ANXA6_HUMAN
08 Aug 2023 13:51:32,734 INFO : 27% Done
08 Aug 2023 13:51:32,780 INFO : 28% Done
08 Aug 2023 13:51:32,823 INFO : Inserting BCAS1_HUMAN
08 Aug 2023 13:51:32,827 INFO : 29% Done
08 Aug 2023 13:51:32,870 INFO : 30% Done
08 Aug 2023 13:51:32,919 INFO : Inserting BGAL_HUMAN
08 Aug 2023 13:51:32,925 INFO : 31% Done
08 Aug 2023 13:51:32,980 INFO : 32% Done
08 Aug 2023 13:51:33,032 INFO : Inserting C1TC_HUMAN
08 Aug 2023 13:51:33,037 INFO : 33% Done
08 Aug 2023 13:51:33,088 INFO : 34% Done
08 Aug 2023 13:51:33,127 INFO : Inserting CAYP1_HUMAN
08 Aug 2023 13:51:33,132 INFO : 35% Done
08 Aug 2023 13:51:33,185 INFO : 36% Done
08 Aug 2023 13:51:33,233 INFO : Inserting CTNB1_HUMAN
08 Aug 2023 13:51:33,238 INFO : 38% Done
08 Aug 2023 13:51:33,290 INFO : 39% Done
08 Aug 2023 13:51:33,338 INFO : Inserting DHE3_HUMAN
08 Aug 2023 13:51:33,343 INFO : 40% Done
08 Aug 2023 13:51:33,391 INFO : 41% Done
08 Aug 2023 13:51:33,442 INFO : Inserting EMAL2_HUMAN
08 Aug 2023 13:51:33,447 INFO : 42% Done
08 Aug 2023 13:51:33,505 INFO : 43% Done
08 Aug 2023 13:51:33,556 INFO : Inserting EMAL4_HUMAN
08 Aug 2023 13:51:33,561 INFO : 44% Done
08 Aug 2023 13:51:33,613 INFO : 45% Done
08 Aug 2023 13:51:33,658 INFO : Inserting FAS_HUMAN
08 Aug 2023 13:51:33,663 INFO : 46% Done
08 Aug 2023 13:51:33,707 INFO : 47% Done
08 Aug 2023 13:51:33,744 INFO : Inserting FXR1_HUMAN
08 Aug 2023 13:51:33,748 INFO : 48% Done
08 Aug 2023 13:51:33,789 INFO : 49% Done
08 Aug 2023 13:51:33,829 INFO : Inserting G6PD_HUMAN
08 Aug 2023 13:51:33,833 INFO : 50% Done
08 Aug 2023 13:51:33,874 INFO : 51% Done
08 Aug 2023 13:51:33,914 INFO : Inserting HS90A_HUMAN
08 Aug 2023 13:51:33,919 INFO : 52% Done
08 Aug 2023 13:51:33,971 INFO : 53% Done
08 Aug 2023 13:51:34,017 INFO : Inserting HS90B_HUMAN
08 Aug 2023 13:51:34,022 INFO : 54% Done
08 Aug 2023 13:51:34,074 INFO : 55% Done
08 Aug 2023 13:51:34,120 INFO : Inserting IDHP_HUMAN
08 Aug 2023 13:51:34,125 INFO : 56% Done
08 Aug 2023 13:51:34,220 INFO : 58% Done
08 Aug 2023 13:51:34,267 INFO : Inserting ILEU_HUMAN
08 Aug 2023 13:51:34,272 INFO : 59% Done
08 Aug 2023 13:51:34,325 INFO : 60% Done
08 Aug 2023 13:51:34,363 INFO : Inserting KPYM_HUMAN
08 Aug 2023 13:51:34,368 INFO : 61% Done
08 Aug 2023 13:51:34,418 INFO : 62% Done
08 Aug 2023 13:51:34,465 INFO : Inserting LDHA_HUMAN
08 Aug 2023 13:51:34,470 INFO : 63% Done
08 Aug 2023 13:51:34,523 INFO : 64% Done
08 Aug 2023 13:51:34,573 INFO : Inserting LDHB_HUMAN
08 Aug 2023 13:51:34,578 INFO : 65% Done
08 Aug 2023 13:51:34,628 INFO : 67% Done
08 Aug 2023 13:51:34,678 INFO : Inserting LEG7_HUMAN
08 Aug 2023 13:51:34,682 INFO : 68% Done
08 Aug 2023 13:51:34,733 INFO : 69% Done
08 Aug 2023 13:51:34,779 INFO : Inserting LOX15_HUMAN
08 Aug 2023 13:51:34,783 INFO : 70% Done
08 Aug 2023 13:51:34,824 INFO : 71% Done
08 Aug 2023 13:51:34,861 INFO : Inserting MAOM_HUMAN
08 Aug 2023 13:51:34,905 INFO : 73% Done
08 Aug 2023 13:51:34,960 INFO : Inserting MLF1_HUMAN
08 Aug 2023 13:51:34,965 INFO : 74% Done
08 Aug 2023 13:51:35,064 INFO : Inserting MVP_HUMAN
08 Aug 2023 13:51:35,069 INFO : 75% Done
08 Aug 2023 13:51:35,122 INFO : 76% Done
08 Aug 2023 13:51:35,162 INFO : Inserting ODO2_HUMAN
08 Aug 2023 13:51:35,167 INFO : 77% Done
08 Aug 2023 13:51:35,219 INFO : 78% Done
08 Aug 2023 13:51:35,273 INFO : Inserting PFKAL_HUMAN
08 Aug 2023 13:51:35,278 INFO : 79% Done
08 Aug 2023 13:51:35,328 INFO : Inserting PFKAP_HUMAN
08 Aug 2023 13:51:35,333 INFO : 81% Done
08 Aug 2023 13:51:35,389 INFO : 82% Done
08 Aug 2023 13:51:35,437 INFO : Inserting PGK1_HUMAN
08 Aug 2023 13:51:35,442 INFO : 83% Done
08 Aug 2023 13:51:35,502 INFO : 84% Done
08 Aug 2023 13:51:35,549 INFO : Inserting PGM1_HUMAN
08 Aug 2023 13:51:35,554 INFO : 85% Done
08 Aug 2023 13:51:35,607 INFO : 86% Done
08 Aug 2023 13:51:35,655 INFO : Inserting PSPB_HUMAN
08 Aug 2023 13:51:35,660 INFO : 88% Done
08 Aug 2023 13:51:35,764 INFO : Inserting PYGB_HUMAN
08 Aug 2023 13:51:35,769 INFO : 89% Done
08 Aug 2023 13:51:35,819 INFO : 91% Done
08 Aug 2023 13:51:35,870 INFO : Inserting RASK_HUMAN
08 Aug 2023 13:51:35,917 INFO : 92% Done
08 Aug 2023 13:51:35,956 INFO : Inserting S10A2_HUMAN
08 Aug 2023 13:51:35,961 INFO : 93% Done
08 Aug 2023 13:51:36,010 INFO : Inserting UBA1_HUMAN
08 Aug 2023 13:51:36,016 INFO : 95% Done
08 Aug 2023 13:51:36,071 INFO : 96% Done
08 Aug 2023 13:51:36,119 INFO : Inserting UGPA_HUMAN
08 Aug 2023 13:51:36,123 INFO : 97% Done
08 Aug 2023 13:51:36,174 INFO : 98% Done
08 Aug 2023 13:51:36,222 INFO : Done parsing Skyline document.
08 Aug 2023 13:51:36,223 INFO : Creating and populating temp tables for Proportion values
08 Aug 2023 13:51:36,334 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2023 13:51:36,527 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2023 13:51:36,612 INFO : Cleaning up temp tables
08 Aug 2023 13:51:36,923 INFO : Completed import of Skyline document from Batch1_Biopsy_2023-08-07_12-08-20.sky.zip
08 Aug 2023 13:51:36,926 INFO : 100% Done
08 Aug 2023 13:51:36,933 INFO : Starting import from Batch2_01_2023-08-07_12-21-56.sky.zip
08 Aug 2023 13:51:36,935 INFO : Starting to import Skyline document from Batch2_01_2023-08-07_12-21-56.sky.zip
08 Aug 2023 13:51:36,936 INFO : Expanding Batch2_01.skyd
08 Aug 2023 13:51:38,521 INFO : Expanding Batch2_01.sky.view
08 Aug 2023 13:51:38,532 INFO : Expanding Batch2_01.sky
08 Aug 2023 13:51:38,730 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
08 Aug 2023 13:51:39,563 INFO : Inserting EGFR_HUMAN
08 Aug 2023 13:51:39,571 INFO : 1% Done
08 Aug 2023 13:51:39,657 INFO : Inserting IDH1_HUMAN
08 Aug 2023 13:51:39,664 INFO : 2% Done
08 Aug 2023 13:51:39,753 INFO : 4% Done
08 Aug 2023 13:51:39,838 INFO : Inserting NFKB1_HUMAN
08 Aug 2023 13:51:39,846 INFO : 5% Done
08 Aug 2023 13:51:39,935 INFO : Inserting ANXA2_HUMAN
08 Aug 2023 13:51:39,943 INFO : 6% Done
08 Aug 2023 13:51:39,952 WARN : 'Massion-2nd_Digestion_1' library was not found in settings.
08 Aug 2023 13:51:40,030 INFO : Inserting 1433F_HUMAN
08 Aug 2023 13:51:40,039 INFO : 7% Done
08 Aug 2023 13:51:40,134 INFO : 8% Done
08 Aug 2023 13:51:40,218 INFO : Inserting 1433S_HUMAN
08 Aug 2023 13:51:40,223 INFO : 9% Done
08 Aug 2023 13:51:40,300 INFO : 10% Done
08 Aug 2023 13:51:40,367 INFO : Inserting 6PGD_HUMAN
08 Aug 2023 13:51:40,374 INFO : 11% Done
08 Aug 2023 13:51:40,463 INFO : 12% Done
08 Aug 2023 13:51:40,547 INFO : Inserting ACLY_HUMAN
08 Aug 2023 13:51:40,553 INFO : 13% Done
08 Aug 2023 13:51:40,626 INFO : 14% Done
08 Aug 2023 13:51:40,707 INFO : Inserting ACSF3_HUMAN
08 Aug 2023 13:51:40,714 INFO : 16% Done
08 Aug 2023 13:51:40,800 INFO : 17% Done
08 Aug 2023 13:51:40,884 INFO : Inserting AK1BA_HUMAN
08 Aug 2023 13:51:40,892 INFO : 18% Done
08 Aug 2023 13:51:40,984 INFO : 19% Done
08 Aug 2023 13:51:41,055 INFO : Inserting AL1A1_HUMAN
08 Aug 2023 13:51:41,063 INFO : 20% Done
08 Aug 2023 13:51:41,158 INFO : 21% Done
08 Aug 2023 13:51:41,244 INFO : Inserting AL3A1_HUMAN
08 Aug 2023 13:51:41,250 INFO : 22% Done
08 Aug 2023 13:51:41,321 INFO : 23% Done
08 Aug 2023 13:51:41,407 INFO : Inserting ANM1_HUMAN
08 Aug 2023 13:51:41,415 INFO : 24% Done
08 Aug 2023 13:51:41,510 INFO : 25% Done
08 Aug 2023 13:51:41,582 INFO : Inserting ANXA3_HUMAN
08 Aug 2023 13:51:41,686 INFO : 27% Done
08 Aug 2023 13:51:41,773 INFO : Inserting ANXA6_HUMAN
08 Aug 2023 13:51:41,779 INFO : 28% Done
08 Aug 2023 13:51:41,851 INFO : Inserting BCAS1_HUMAN
08 Aug 2023 13:51:41,860 INFO : 29% Done
08 Aug 2023 13:51:41,959 INFO : 30% Done
08 Aug 2023 13:51:42,037 INFO : Inserting BGAL_HUMAN
08 Aug 2023 13:51:42,045 INFO : 31% Done
08 Aug 2023 13:51:42,128 INFO : 33% Done
08 Aug 2023 13:51:42,207 INFO : Inserting C1TC_HUMAN
08 Aug 2023 13:51:42,214 INFO : 34% Done
08 Aug 2023 13:51:42,300 INFO : 35% Done
08 Aug 2023 13:51:42,378 INFO : Inserting CAYP1_HUMAN
08 Aug 2023 13:51:42,385 INFO : 36% Done
08 Aug 2023 13:51:42,468 INFO : 37% Done
08 Aug 2023 13:51:42,546 INFO : Inserting CEAM5_HUMAN
08 Aug 2023 13:51:42,553 INFO : 38% Done
08 Aug 2023 13:51:42,632 INFO : Inserting CTNB1_HUMAN
08 Aug 2023 13:51:42,638 INFO : 40% Done
08 Aug 2023 13:51:42,720 INFO : 41% Done
08 Aug 2023 13:51:42,785 INFO : Inserting DHE3_HUMAN
08 Aug 2023 13:51:42,794 INFO : 42% Done
08 Aug 2023 13:51:42,897 INFO : 43% Done
08 Aug 2023 13:51:42,975 INFO : Inserting DLG5_HUMAN
08 Aug 2023 13:51:42,981 INFO : 44% Done
08 Aug 2023 13:51:43,060 INFO : Inserting EMAL2_HUMAN
08 Aug 2023 13:51:43,066 INFO : 46% Done
08 Aug 2023 13:51:43,150 INFO : 47% Done
08 Aug 2023 13:51:43,226 INFO : Inserting EMAL4_HUMAN
08 Aug 2023 13:51:43,232 INFO : 48% Done
08 Aug 2023 13:51:43,302 INFO : 49% Done
08 Aug 2023 13:51:43,379 INFO : Inserting FAS_HUMAN
08 Aug 2023 13:51:43,386 INFO : 50% Done
08 Aug 2023 13:51:43,469 INFO : 51% Done
08 Aug 2023 13:51:43,546 INFO : Inserting FXR1_HUMAN
08 Aug 2023 13:51:43,553 INFO : 52% Done
08 Aug 2023 13:51:43,630 INFO : Inserting G6PD_HUMAN
08 Aug 2023 13:51:43,636 INFO : 53% Done
08 Aug 2023 13:51:43,718 INFO : 55% Done
08 Aug 2023 13:51:43,795 INFO : Inserting HS90A_HUMAN
08 Aug 2023 13:51:43,802 INFO : 56% Done
08 Aug 2023 13:51:43,885 INFO : 57% Done
08 Aug 2023 13:51:43,963 INFO : Inserting HS90B_HUMAN
08 Aug 2023 13:51:43,969 INFO : 58% Done
08 Aug 2023 13:51:44,051 INFO : 59% Done
08 Aug 2023 13:51:44,128 INFO : Inserting IDHP_HUMAN
08 Aug 2023 13:51:44,135 INFO : 61% Done
08 Aug 2023 13:51:44,213 INFO : Inserting ILEU_HUMAN
08 Aug 2023 13:51:44,221 INFO : 62% Done
08 Aug 2023 13:51:44,306 INFO : 63% Done
08 Aug 2023 13:51:44,387 INFO : Inserting KPYM_HUMAN
08 Aug 2023 13:51:44,394 INFO : 64% Done
08 Aug 2023 13:51:44,477 INFO : 65% Done
08 Aug 2023 13:51:44,553 INFO : Inserting LDHA_HUMAN
08 Aug 2023 13:51:44,560 INFO : 66% Done
08 Aug 2023 13:51:44,643 INFO : 68% Done
08 Aug 2023 13:51:44,720 INFO : Inserting LDHB_HUMAN
08 Aug 2023 13:51:44,726 INFO : 69% Done
08 Aug 2023 13:51:44,811 INFO : 70% Done
08 Aug 2023 13:51:44,887 INFO : Inserting LEG7_HUMAN
08 Aug 2023 13:51:44,895 INFO : 71% Done
08 Aug 2023 13:51:44,978 INFO : 72% Done
08 Aug 2023 13:51:45,054 INFO : Inserting LOX15_HUMAN
08 Aug 2023 13:51:45,061 INFO : 73% Done
08 Aug 2023 13:51:45,144 INFO : 74% Done
08 Aug 2023 13:51:45,220 INFO : Inserting MAOM_HUMAN
08 Aug 2023 13:51:45,227 INFO : 75% Done
08 Aug 2023 13:51:45,309 INFO : 76% Done
08 Aug 2023 13:51:45,373 INFO : Inserting MLF1_HUMAN
08 Aug 2023 13:51:45,379 INFO : 77% Done
08 Aug 2023 13:51:45,508 INFO : Inserting MVP_HUMAN
08 Aug 2023 13:51:45,515 INFO : 79% Done
08 Aug 2023 13:51:45,598 INFO : 80% Done
08 Aug 2023 13:51:45,683 INFO : Inserting ODO2_HUMAN
08 Aug 2023 13:51:45,689 INFO : 81% Done
08 Aug 2023 13:51:45,757 INFO : 82% Done
08 Aug 2023 13:51:45,835 INFO : Inserting PFKAP_HUMAN
08 Aug 2023 13:51:45,841 INFO : 83% Done
08 Aug 2023 13:51:45,925 INFO : 84% Done
08 Aug 2023 13:51:46,002 INFO : Inserting PGK1_HUMAN
08 Aug 2023 13:51:46,009 INFO : 85% Done
08 Aug 2023 13:51:46,087 INFO : Inserting PGM1_HUMAN
08 Aug 2023 13:51:46,093 INFO : 87% Done
08 Aug 2023 13:51:46,176 INFO : Inserting PSPB_HUMAN
08 Aug 2023 13:51:46,183 INFO : 88% Done
08 Aug 2023 13:51:46,266 INFO : Inserting PYGB_HUMAN
08 Aug 2023 13:51:46,274 INFO : 89% Done
08 Aug 2023 13:51:46,361 INFO : 90% Done
08 Aug 2023 13:51:46,443 INFO : Inserting RASK_HUMAN
08 Aug 2023 13:51:46,450 INFO : 91% Done
08 Aug 2023 13:51:46,533 INFO : Inserting S10A2_HUMAN
08 Aug 2023 13:51:46,540 INFO : 92% Done
08 Aug 2023 13:51:46,622 INFO : Inserting UBA1_HUMAN
08 Aug 2023 13:51:46,630 INFO : 94% Done
08 Aug 2023 13:51:46,719 INFO : 95% Done
08 Aug 2023 13:51:46,800 INFO : Inserting UGPA_HUMAN
08 Aug 2023 13:51:46,807 INFO : 96% Done
08 Aug 2023 13:51:46,894 INFO : 97% Done
08 Aug 2023 13:51:46,975 INFO : Inserting KMT2D
08 Aug 2023 13:51:46,981 INFO : 98% Done
08 Aug 2023 13:51:47,048 INFO : Done parsing Skyline document.
08 Aug 2023 13:51:47,049 INFO : Creating and populating temp tables for Proportion values
08 Aug 2023 13:51:47,191 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2023 13:51:47,497 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2023 13:51:47,629 INFO : Cleaning up temp tables
08 Aug 2023 13:51:47,897 INFO : Completed import of Skyline document from Batch2_01_2023-08-07_12-21-56.sky.zip
08 Aug 2023 13:51:47,900 INFO : 100% Done
08 Aug 2023 13:51:47,907 INFO : Starting import from Batch2_02_2023-08-07_12-25-16.sky.zip
08 Aug 2023 13:51:47,910 INFO : Starting to import Skyline document from Batch2_02_2023-08-07_12-25-16.sky.zip
08 Aug 2023 13:51:47,910 INFO : Expanding Batch2_02.skyd
08 Aug 2023 13:51:48,923 INFO : Expanding Batch2_02.sky.view
08 Aug 2023 13:51:49,162 INFO : Expanding Batch2_02.sky
08 Aug 2023 13:51:49,339 WARN : The version of this Skyline document is 22.24. This is newer than the highest supported version 22.13
08 Aug 2023 13:51:50,192 INFO : Inserting EGFR_HUMAN
08 Aug 2023 13:51:50,198 INFO : 1% Done
08 Aug 2023 13:51:50,265 INFO : Inserting IDH1_HUMAN
08 Aug 2023 13:51:50,272 INFO : 2% Done
08 Aug 2023 13:51:50,357 INFO : 4% Done
08 Aug 2023 13:51:50,438 INFO : Inserting NFKB1_HUMAN
08 Aug 2023 13:51:50,444 INFO : 5% Done
08 Aug 2023 13:51:50,524 INFO : Inserting ANXA2_HUMAN
08 Aug 2023 13:51:50,531 INFO : 6% Done
08 Aug 2023 13:51:50,538 WARN : 'Massion-2nd_Digestion_2' library was not found in settings.
08 Aug 2023 13:51:50,610 INFO : Inserting 1433F_HUMAN
08 Aug 2023 13:51:50,618 INFO : 7% Done
08 Aug 2023 13:51:50,706 INFO : 8% Done
08 Aug 2023 13:51:50,785 INFO : Inserting 1433S_HUMAN
08 Aug 2023 13:51:50,789 INFO : 9% Done
08 Aug 2023 13:51:50,857 INFO : 10% Done
08 Aug 2023 13:51:50,921 INFO : Inserting 6PGD_HUMAN
08 Aug 2023 13:51:50,928 INFO : 11% Done
08 Aug 2023 13:51:51,013 INFO : 12% Done
08 Aug 2023 13:51:51,092 INFO : Inserting ACLY_HUMAN
08 Aug 2023 13:51:51,097 INFO : 13% Done
08 Aug 2023 13:51:51,169 INFO : 14% Done
08 Aug 2023 13:51:51,250 INFO : Inserting ACSF3_HUMAN
08 Aug 2023 13:51:51,257 INFO : 16% Done
08 Aug 2023 13:51:51,343 INFO : 17% Done
08 Aug 2023 13:51:51,422 INFO : Inserting AK1BA_HUMAN
08 Aug 2023 13:51:51,429 INFO : 18% Done
08 Aug 2023 13:51:51,513 INFO : 19% Done
08 Aug 2023 13:51:51,576 INFO : Inserting AL1A1_HUMAN
08 Aug 2023 13:51:51,583 INFO : 20% Done
08 Aug 2023 13:51:51,668 INFO : 21% Done
08 Aug 2023 13:51:51,747 INFO : Inserting AL3A1_HUMAN
08 Aug 2023 13:51:51,753 INFO : 22% Done
08 Aug 2023 13:51:51,823 INFO : 23% Done
08 Aug 2023 13:51:51,902 INFO : Inserting ANM1_HUMAN
08 Aug 2023 13:51:51,909 INFO : 24% Done
08 Aug 2023 13:51:51,995 INFO : 25% Done
08 Aug 2023 13:51:52,059 INFO : Inserting ANXA3_HUMAN
08 Aug 2023 13:51:52,066 INFO : 26% Done
08 Aug 2023 13:51:52,153 INFO : 27% Done
08 Aug 2023 13:51:52,231 INFO : Inserting ANXA6_HUMAN
08 Aug 2023 13:51:52,236 INFO : 28% Done
08 Aug 2023 13:51:52,299 INFO : Inserting BCAS1_HUMAN
08 Aug 2023 13:51:52,308 INFO : 29% Done
08 Aug 2023 13:51:52,405 INFO : 30% Done
08 Aug 2023 13:51:52,482 INFO : Inserting BGAL_HUMAN
08 Aug 2023 13:51:52,489 INFO : 31% Done
08 Aug 2023 13:51:52,571 INFO : 33% Done
08 Aug 2023 13:51:52,648 INFO : Inserting C1TC_HUMAN
08 Aug 2023 13:51:52,655 INFO : 34% Done
08 Aug 2023 13:51:52,737 INFO : 35% Done
08 Aug 2023 13:51:52,813 INFO : Inserting CAYP1_HUMAN
08 Aug 2023 13:51:52,820 INFO : 36% Done
08 Aug 2023 13:51:52,902 INFO : 37% Done
08 Aug 2023 13:51:52,979 INFO : Inserting CEAM5_HUMAN
08 Aug 2023 13:51:52,985 INFO : 39% Done
08 Aug 2023 13:51:53,064 INFO : Inserting CTNB1_HUMAN
08 Aug 2023 13:51:53,070 INFO : 40% Done
08 Aug 2023 13:51:53,150 INFO : 41% Done
08 Aug 2023 13:51:53,213 INFO : Inserting DHE3_HUMAN
08 Aug 2023 13:51:53,222 INFO : 42% Done
08 Aug 2023 13:51:53,320 INFO : 43% Done
08 Aug 2023 13:51:53,396 INFO : Inserting DLG5_HUMAN
08 Aug 2023 13:51:53,403 INFO : 44% Done
08 Aug 2023 13:51:53,482 INFO : Inserting EMAL2_HUMAN
08 Aug 2023 13:51:53,488 INFO : 46% Done
08 Aug 2023 13:51:53,571 INFO : 47% Done
08 Aug 2023 13:51:53,648 INFO : Inserting EMAL4_HUMAN
08 Aug 2023 13:51:53,653 INFO : 48% Done
08 Aug 2023 13:51:53,721 INFO : 49% Done
08 Aug 2023 13:51:53,799 INFO : Inserting FAS_HUMAN
08 Aug 2023 13:51:53,806 INFO : 50% Done
08 Aug 2023 13:51:53,890 INFO : 51% Done
08 Aug 2023 13:51:53,968 INFO : Inserting FXR1_HUMAN
08 Aug 2023 13:51:53,974 INFO : 52% Done
08 Aug 2023 13:51:54,051 INFO : Inserting G6PD_HUMAN
08 Aug 2023 13:51:54,057 INFO : 53% Done
08 Aug 2023 13:51:54,138 INFO : 55% Done
08 Aug 2023 13:51:54,214 INFO : Inserting HS90A_HUMAN
08 Aug 2023 13:51:54,220 INFO : 56% Done
08 Aug 2023 13:51:54,303 INFO : 57% Done
08 Aug 2023 13:51:54,379 INFO : Inserting HS90B_HUMAN
08 Aug 2023 13:51:54,386 INFO : 58% Done
08 Aug 2023 13:51:54,469 INFO : 59% Done
08 Aug 2023 13:51:54,546 INFO : Inserting IDHP_HUMAN
08 Aug 2023 13:51:54,552 INFO : 61% Done
08 Aug 2023 13:51:54,628 INFO : Inserting ILEU_HUMAN
08 Aug 2023 13:51:54,635 INFO : 62% Done
08 Aug 2023 13:51:54,717 INFO : 63% Done
08 Aug 2023 13:51:54,795 INFO : Inserting KPYM_HUMAN
08 Aug 2023 13:51:54,802 INFO : 64% Done
08 Aug 2023 13:51:54,884 INFO : 65% Done
08 Aug 2023 13:51:54,962 INFO : Inserting LDHA_HUMAN
08 Aug 2023 13:51:54,968 INFO : 66% Done
08 Aug 2023 13:51:55,051 INFO : 68% Done
08 Aug 2023 13:51:55,132 INFO : Inserting LDHB_HUMAN
08 Aug 2023 13:51:55,138 INFO : 69% Done
08 Aug 2023 13:51:55,220 INFO : 70% Done
08 Aug 2023 13:51:55,296 INFO : Inserting LEG7_HUMAN
08 Aug 2023 13:51:55,302 INFO : 71% Done
08 Aug 2023 13:51:55,385 INFO : 72% Done
08 Aug 2023 13:51:55,461 INFO : Inserting LOX15_HUMAN
08 Aug 2023 13:51:55,468 INFO : 73% Done
08 Aug 2023 13:51:55,551 INFO : 74% Done
08 Aug 2023 13:51:55,628 INFO : Inserting MAOM_HUMAN
08 Aug 2023 13:51:55,635 INFO : 75% Done
08 Aug 2023 13:51:55,716 INFO : 76% Done
08 Aug 2023 13:51:55,778 INFO : Inserting MLF1_HUMAN
08 Aug 2023 13:51:55,783 INFO : 77% Done
08 Aug 2023 13:51:55,910 INFO : Inserting MVP_HUMAN
08 Aug 2023 13:51:55,916 INFO : 79% Done
08 Aug 2023 13:51:56,000 INFO : 80% Done
08 Aug 2023 13:51:56,083 INFO : Inserting ODO2_HUMAN
08 Aug 2023 13:51:56,088 INFO : 81% Done
08 Aug 2023 13:51:56,156 INFO : 82% Done
08 Aug 2023 13:51:56,232 INFO : Inserting PFKAP_HUMAN
08 Aug 2023 13:51:56,238 INFO : 83% Done
08 Aug 2023 13:51:56,321 INFO : 84% Done
08 Aug 2023 13:51:56,398 INFO : Inserting PGK1_HUMAN
08 Aug 2023 13:51:56,404 INFO : 85% Done
08 Aug 2023 13:51:56,481 INFO : Inserting PGM1_HUMAN
08 Aug 2023 13:51:56,487 INFO : 87% Done
08 Aug 2023 13:51:56,565 INFO : Inserting PSPB_HUMAN
08 Aug 2023 13:51:56,571 INFO : 88% Done
08 Aug 2023 13:51:56,649 INFO : Inserting PYGB_HUMAN
08 Aug 2023 13:51:56,656 INFO : 89% Done
08 Aug 2023 13:51:56,739 INFO : 90% Done
08 Aug 2023 13:51:56,817 INFO : Inserting RASK_HUMAN
08 Aug 2023 13:51:56,824 INFO : 91% Done
08 Aug 2023 13:51:56,903 INFO : Inserting S10A2_HUMAN
08 Aug 2023 13:51:56,909 INFO : 92% Done
08 Aug 2023 13:51:56,989 INFO : Inserting UBA1_HUMAN
08 Aug 2023 13:51:56,997 INFO : 94% Done
08 Aug 2023 13:51:57,081 INFO : 95% Done
08 Aug 2023 13:51:57,157 INFO : Inserting UGPA_HUMAN
08 Aug 2023 13:51:57,164 INFO : 96% Done
08 Aug 2023 13:51:57,247 INFO : 97% Done
08 Aug 2023 13:51:57,324 INFO : Inserting KMT2D
08 Aug 2023 13:51:57,330 INFO : 98% Done
08 Aug 2023 13:51:57,395 INFO : Done parsing Skyline document.
08 Aug 2023 13:51:57,396 INFO : Creating and populating temp tables for Proportion values
08 Aug 2023 13:51:57,541 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2023 13:51:57,862 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2023 13:51:58,008 INFO : Cleaning up temp tables
08 Aug 2023 13:51:58,288 INFO : Completed import of Skyline document from Batch2_02_2023-08-07_12-25-16.sky.zip
08 Aug 2023 13:51:58,290 INFO : 100% Done
08 Aug 2023 13:51:58,297 INFO : Starting import from Batch2_03_2023-08-07_12-27-19.sky.zip
08 Aug 2023 13:51:58,299 INFO : Starting to import Skyline document from Batch2_03_2023-08-07_12-27-19.sky.zip
08 Aug 2023 13:51:58,300 INFO : Expanding Batch2_03.skyd
08 Aug 2023 13:51:59,368 INFO : Expanding Batch2_03.sky.view
08 Aug 2023 13:51:59,371 INFO : Expanding Batch2_03.sky
08 Aug 2023 13:51:59,686 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
08 Aug 2023 13:52:00,716 INFO : Inserting EGFR_HUMAN
08 Aug 2023 13:52:00,722 INFO : 1% Done
08 Aug 2023 13:52:00,788 INFO : Inserting IDH1_HUMAN
08 Aug 2023 13:52:00,795 INFO : 2% Done
08 Aug 2023 13:52:00,878 INFO : 4% Done
08 Aug 2023 13:52:00,955 INFO : Inserting NFKB1_HUMAN
08 Aug 2023 13:52:00,962 INFO : 5% Done
08 Aug 2023 13:52:01,043 INFO : Inserting ANXA2_HUMAN
08 Aug 2023 13:52:01,050 INFO : 6% Done
08 Aug 2023 13:52:01,058 WARN : 'Massion-2nd_Digestion_3' library was not found in settings.
08 Aug 2023 13:52:01,130 INFO : Inserting 1433F_HUMAN
08 Aug 2023 13:52:01,137 INFO : 7% Done
08 Aug 2023 13:52:01,221 INFO : 8% Done
08 Aug 2023 13:52:01,297 INFO : Inserting 1433S_HUMAN
08 Aug 2023 13:52:01,302 INFO : 9% Done
08 Aug 2023 13:52:01,370 INFO : 10% Done
08 Aug 2023 13:52:01,432 INFO : Inserting 6PGD_HUMAN
08 Aug 2023 13:52:01,440 INFO : 11% Done
08 Aug 2023 13:52:01,523 INFO : 12% Done
08 Aug 2023 13:52:01,603 INFO : Inserting ACLY_HUMAN
08 Aug 2023 13:52:01,609 INFO : 13% Done
08 Aug 2023 13:52:01,682 INFO : 14% Done
08 Aug 2023 13:52:01,764 INFO : Inserting ACSF3_HUMAN
08 Aug 2023 13:52:01,771 INFO : 16% Done
08 Aug 2023 13:52:01,856 INFO : 17% Done
08 Aug 2023 13:52:01,934 INFO : Inserting AK1BA_HUMAN
08 Aug 2023 13:52:01,941 INFO : 18% Done
08 Aug 2023 13:52:02,023 INFO : 19% Done
08 Aug 2023 13:52:02,086 INFO : Inserting AL1A1_HUMAN
08 Aug 2023 13:52:02,093 INFO : 20% Done
08 Aug 2023 13:52:02,177 INFO : 21% Done
08 Aug 2023 13:52:02,255 INFO : Inserting AL3A1_HUMAN
08 Aug 2023 13:52:02,261 INFO : 22% Done
08 Aug 2023 13:52:02,334 INFO : 23% Done
08 Aug 2023 13:52:02,414 INFO : Inserting ANM1_HUMAN
08 Aug 2023 13:52:02,421 INFO : 25% Done
08 Aug 2023 13:52:02,571 INFO : Inserting ANXA3_HUMAN
08 Aug 2023 13:52:02,577 INFO : 26% Done
08 Aug 2023 13:52:02,660 INFO : 27% Done
08 Aug 2023 13:52:02,736 INFO : Inserting ANXA6_HUMAN
08 Aug 2023 13:52:02,740 INFO : 28% Done
08 Aug 2023 13:52:02,802 INFO : Inserting BCAS1_HUMAN
08 Aug 2023 13:52:02,810 INFO : 29% Done
08 Aug 2023 13:52:02,905 INFO : 30% Done
08 Aug 2023 13:52:02,982 INFO : Inserting BGAL_HUMAN
08 Aug 2023 13:52:02,989 INFO : 31% Done
08 Aug 2023 13:52:03,069 INFO : 32% Done
08 Aug 2023 13:52:03,130 INFO : Inserting C1TC_HUMAN
08 Aug 2023 13:52:03,137 INFO : 34% Done
08 Aug 2023 13:52:03,217 INFO : 35% Done
08 Aug 2023 13:52:03,292 INFO : Inserting CAYP1_HUMAN
08 Aug 2023 13:52:03,299 INFO : 36% Done
08 Aug 2023 13:52:03,379 INFO : 37% Done
08 Aug 2023 13:52:03,455 INFO : Inserting CEAM5_HUMAN
08 Aug 2023 13:52:03,461 INFO : 38% Done
08 Aug 2023 13:52:03,539 INFO : Inserting CTNB1_HUMAN
08 Aug 2023 13:52:03,546 INFO : 40% Done
08 Aug 2023 13:52:03,687 INFO : Inserting DHE3_HUMAN
08 Aug 2023 13:52:03,697 INFO : 42% Done
08 Aug 2023 13:52:03,794 INFO : 43% Done
08 Aug 2023 13:52:03,869 INFO : Inserting DLG5_HUMAN
08 Aug 2023 13:52:03,876 INFO : 44% Done
08 Aug 2023 13:52:03,952 INFO : Inserting EMAL2_HUMAN
08 Aug 2023 13:52:03,958 INFO : 45% Done
08 Aug 2023 13:52:04,041 INFO : 47% Done
08 Aug 2023 13:52:04,118 INFO : Inserting EMAL4_HUMAN
08 Aug 2023 13:52:04,192 INFO : 49% Done
08 Aug 2023 13:52:04,268 INFO : Inserting FAS_HUMAN
08 Aug 2023 13:52:04,274 INFO : 50% Done
08 Aug 2023 13:52:04,358 INFO : 51% Done
08 Aug 2023 13:52:04,434 INFO : Inserting FXR1_HUMAN
08 Aug 2023 13:52:04,440 INFO : 52% Done
08 Aug 2023 13:52:04,516 INFO : Inserting G6PD_HUMAN
08 Aug 2023 13:52:04,522 INFO : 53% Done
08 Aug 2023 13:52:04,602 INFO : 54% Done
08 Aug 2023 13:52:04,680 INFO : 55% Done
08 Aug 2023 13:52:04,680 INFO : Inserting HS90A_HUMAN
08 Aug 2023 13:52:04,686 INFO : 56% Done
08 Aug 2023 13:52:04,768 INFO : 57% Done
08 Aug 2023 13:52:04,844 INFO : Inserting HS90B_HUMAN
08 Aug 2023 13:52:04,851 INFO : 58% Done
08 Aug 2023 13:52:04,930 INFO : 59% Done
08 Aug 2023 13:52:05,005 INFO : Inserting IDHP_HUMAN
08 Aug 2023 13:52:05,012 INFO : 60% Done
08 Aug 2023 13:52:05,086 INFO : Inserting ILEU_HUMAN
08 Aug 2023 13:52:05,093 INFO : 62% Done
08 Aug 2023 13:52:05,173 INFO : 63% Done
08 Aug 2023 13:52:05,249 INFO : Inserting KPYM_HUMAN
08 Aug 2023 13:52:05,255 INFO : 64% Done
08 Aug 2023 13:52:05,336 INFO : 65% Done
08 Aug 2023 13:52:05,411 INFO : Inserting LDHA_HUMAN
08 Aug 2023 13:52:05,418 INFO : 66% Done
08 Aug 2023 13:52:05,501 INFO : 67% Done
08 Aug 2023 13:52:05,577 INFO : 68% Done
08 Aug 2023 13:52:05,577 INFO : Inserting LDHB_HUMAN
08 Aug 2023 13:52:05,583 INFO : 69% Done
08 Aug 2023 13:52:05,664 INFO : 70% Done
08 Aug 2023 13:52:05,739 INFO : Inserting LEG7_HUMAN
08 Aug 2023 13:52:05,746 INFO : 71% Done
08 Aug 2023 13:52:05,827 INFO : 72% Done
08 Aug 2023 13:52:05,903 INFO : Inserting LOX15_HUMAN
08 Aug 2023 13:52:05,909 INFO : 73% Done
08 Aug 2023 13:52:05,991 INFO : 74% Done
08 Aug 2023 13:52:06,068 INFO : Inserting MAOM_HUMAN
08 Aug 2023 13:52:06,074 INFO : 75% Done
08 Aug 2023 13:52:06,155 INFO : 76% Done
08 Aug 2023 13:52:06,216 INFO : Inserting MLF1_HUMAN
08 Aug 2023 13:52:06,222 INFO : 77% Done
08 Aug 2023 13:52:06,346 INFO : Inserting MVP_HUMAN
08 Aug 2023 13:52:06,353 INFO : 79% Done
08 Aug 2023 13:52:06,434 INFO : 80% Done
08 Aug 2023 13:52:06,514 INFO : Inserting ODO2_HUMAN
08 Aug 2023 13:52:06,520 INFO : 81% Done
08 Aug 2023 13:52:06,587 INFO : 82% Done
08 Aug 2023 13:52:06,664 INFO : Inserting PFKAP_HUMAN
08 Aug 2023 13:52:06,671 INFO : 83% Done
08 Aug 2023 13:52:06,753 INFO : 84% Done
08 Aug 2023 13:52:06,830 INFO : Inserting PGK1_HUMAN
08 Aug 2023 13:52:06,837 INFO : 85% Done
08 Aug 2023 13:52:06,914 INFO : Inserting PGM1_HUMAN
08 Aug 2023 13:52:06,920 INFO : 87% Done
08 Aug 2023 13:52:06,996 INFO : Inserting PSPB_HUMAN
08 Aug 2023 13:52:07,002 INFO : 88% Done
08 Aug 2023 13:52:07,080 INFO : Inserting PYGB_HUMAN
08 Aug 2023 13:52:07,087 INFO : 89% Done
08 Aug 2023 13:52:07,168 INFO : 90% Done
08 Aug 2023 13:52:07,244 INFO : Inserting RASK_HUMAN
08 Aug 2023 13:52:07,251 INFO : 91% Done
08 Aug 2023 13:52:07,328 INFO : Inserting S10A2_HUMAN
08 Aug 2023 13:52:07,335 INFO : 92% Done
08 Aug 2023 13:52:07,412 INFO : Inserting UBA1_HUMAN
08 Aug 2023 13:52:07,418 INFO : 94% Done
08 Aug 2023 13:52:07,500 INFO : 95% Done
08 Aug 2023 13:52:07,576 INFO : Inserting UGPA_HUMAN
08 Aug 2023 13:52:07,582 INFO : 96% Done
08 Aug 2023 13:52:07,663 INFO : 97% Done
08 Aug 2023 13:52:07,741 INFO : Inserting KMT2D
08 Aug 2023 13:52:07,747 INFO : 98% Done
08 Aug 2023 13:52:07,811 INFO : Done parsing Skyline document.
08 Aug 2023 13:52:07,812 INFO : Creating and populating temp tables for Proportion values
08 Aug 2023 13:52:07,946 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2023 13:52:08,257 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2023 13:52:08,391 INFO : Cleaning up temp tables
08 Aug 2023 13:52:08,651 INFO : Completed import of Skyline document from Batch2_03_2023-08-07_12-27-19.sky.zip
08 Aug 2023 13:52:08,654 INFO : 100% Done
08 Aug 2023 13:52:08,660 INFO : Starting import from Batch1_Brushing_2023-08-07_14-38-16.sky.zip
08 Aug 2023 13:52:08,662 INFO : Starting to import Skyline document from Batch1_Brushing_2023-08-07_14-38-16.sky.zip
08 Aug 2023 13:52:08,662 INFO : Expanding Batch1_Brushing.skyd
08 Aug 2023 13:52:08,904 INFO : Expanding Batch1_Brushing.sky.view
08 Aug 2023 13:52:08,905 INFO : Expanding Batch1_Brushing.sky
08 Aug 2023 13:52:09,057 WARN : The version of this Skyline document is 22.2. This is newer than the highest supported version 22.13
08 Aug 2023 13:52:09,061 INFO : 1% Done
08 Aug 2023 13:52:09,643 INFO : Inserting IDH1_HUMAN
08 Aug 2023 13:52:09,648 INFO : 2% Done
08 Aug 2023 13:52:09,703 INFO : 3% Done
08 Aug 2023 13:52:09,753 INFO : 4% Done
08 Aug 2023 13:52:09,753 INFO : Inserting ANXA2_HUMAN
08 Aug 2023 13:52:09,758 INFO : 5% Done
08 Aug 2023 13:52:09,763 WARN : 'Massion-lung_final_final' library was not found in settings.
08 Aug 2023 13:52:09,798 INFO : Inserting 1433F_HUMAN
08 Aug 2023 13:52:09,803 INFO : 6% Done
08 Aug 2023 13:52:09,860 INFO : 7% Done
08 Aug 2023 13:52:09,912 INFO : 8% Done
08 Aug 2023 13:52:09,912 INFO : Inserting 1433S_HUMAN
08 Aug 2023 13:52:09,916 INFO : 9% Done
08 Aug 2023 13:52:09,961 INFO : 10% Done
08 Aug 2023 13:52:10,001 INFO : Inserting 6PGD_HUMAN
08 Aug 2023 13:52:10,006 INFO : 11% Done
08 Aug 2023 13:52:10,059 INFO : 13% Done
08 Aug 2023 13:52:10,108 INFO : Inserting ACLY_HUMAN
08 Aug 2023 13:52:10,113 INFO : 14% Done
08 Aug 2023 13:52:10,161 INFO : Inserting ACSF3_HUMAN
08 Aug 2023 13:52:10,165 INFO : 16% Done
08 Aug 2023 13:52:10,217 INFO : 17% Done
08 Aug 2023 13:52:10,264 INFO : Inserting AK1BA_HUMAN
08 Aug 2023 13:52:10,269 INFO : 19% Done
08 Aug 2023 13:52:10,317 INFO : Inserting AL1A1_HUMAN
08 Aug 2023 13:52:10,322 INFO : 20% Done
08 Aug 2023 13:52:10,373 INFO : 21% Done
08 Aug 2023 13:52:10,421 INFO : Inserting AL3A1_HUMAN
08 Aug 2023 13:52:10,427 INFO : 23% Done
08 Aug 2023 13:52:10,478 INFO : 24% Done
08 Aug 2023 13:52:10,526 INFO : Inserting ANM1_HUMAN
08 Aug 2023 13:52:10,531 INFO : 25% Done
08 Aug 2023 13:52:10,579 INFO : Inserting ANXA3_HUMAN
08 Aug 2023 13:52:10,584 INFO : 26% Done
08 Aug 2023 13:52:10,637 INFO : 28% Done
08 Aug 2023 13:52:10,685 INFO : Inserting ANXA6_HUMAN
08 Aug 2023 13:52:10,689 INFO : 29% Done
08 Aug 2023 13:52:10,729 INFO : Inserting BCAS1_HUMAN
08 Aug 2023 13:52:10,733 INFO : 30% Done
08 Aug 2023 13:52:10,775 INFO : 31% Done
08 Aug 2023 13:52:10,824 INFO : 32% Done
08 Aug 2023 13:52:10,824 INFO : Inserting BGAL_HUMAN
08 Aug 2023 13:52:10,829 INFO : 33% Done
08 Aug 2023 13:52:10,876 INFO : Inserting C1TC_HUMAN
08 Aug 2023 13:52:10,881 INFO : 34% Done
08 Aug 2023 13:52:10,932 INFO : 36% Done
08 Aug 2023 13:52:10,971 INFO : Inserting CAYP1_HUMAN
08 Aug 2023 13:52:10,976 INFO : 37% Done
08 Aug 2023 13:52:11,028 INFO : 38% Done
08 Aug 2023 13:52:11,076 INFO : Inserting CTNB1_HUMAN
08 Aug 2023 13:52:11,081 INFO : 40% Done
08 Aug 2023 13:52:11,133 INFO : 41% Done
08 Aug 2023 13:52:11,182 INFO : Inserting DHE3_HUMAN
08 Aug 2023 13:52:11,187 INFO : 43% Done
08 Aug 2023 13:52:11,235 INFO : Inserting EMAL2_HUMAN
08 Aug 2023 13:52:11,240 INFO : 44% Done
08 Aug 2023 13:52:11,292 INFO : 46% Done
08 Aug 2023 13:52:11,340 INFO : Inserting EMAL4_HUMAN
08 Aug 2023 13:52:11,345 INFO : 47% Done
08 Aug 2023 13:52:11,397 INFO : 49% Done
08 Aug 2023 13:52:11,445 INFO : Inserting FAS_HUMAN
08 Aug 2023 13:52:11,449 INFO : 50% Done
08 Aug 2023 13:52:11,491 INFO : 51% Done
08 Aug 2023 13:52:11,531 INFO : Inserting G6PD_HUMAN
08 Aug 2023 13:52:11,535 INFO : 52% Done
08 Aug 2023 13:52:11,577 INFO : 53% Done
08 Aug 2023 13:52:11,616 INFO : Inserting HS90A_HUMAN
08 Aug 2023 13:52:11,621 INFO : 55% Done
08 Aug 2023 13:52:11,669 INFO : Inserting HS90B_HUMAN
08 Aug 2023 13:52:11,673 INFO : 56% Done
08 Aug 2023 13:52:11,722 INFO : Inserting IDHP_HUMAN
08 Aug 2023 13:52:11,727 INFO : 58% Done
08 Aug 2023 13:52:11,774 INFO : Inserting ILEU_HUMAN
08 Aug 2023 13:52:11,779 INFO : 59% Done
08 Aug 2023 13:52:11,830 INFO : 60% Done
08 Aug 2023 13:52:11,870 INFO : Inserting KPYM_HUMAN
08 Aug 2023 13:52:11,875 INFO : 62% Done
08 Aug 2023 13:52:11,927 INFO : 63% Done
08 Aug 2023 13:52:11,975 INFO : Inserting LDHA_HUMAN
08 Aug 2023 13:52:11,979 INFO : 65% Done
08 Aug 2023 13:52:12,030 INFO : 66% Done
08 Aug 2023 13:52:12,077 INFO : Inserting LDHB_HUMAN
08 Aug 2023 13:52:12,082 INFO : 67% Done
08 Aug 2023 13:52:12,130 INFO : Inserting LEG7_HUMAN
08 Aug 2023 13:52:12,134 INFO : 69% Done
08 Aug 2023 13:52:12,186 INFO : 70% Done
08 Aug 2023 13:52:12,233 INFO : Inserting LOX15_HUMAN
08 Aug 2023 13:52:12,237 INFO : 71% Done
08 Aug 2023 13:52:12,279 INFO : 73% Done
08 Aug 2023 13:52:12,318 INFO : Inserting MAOM_HUMAN
08 Aug 2023 13:52:12,322 INFO : 74% Done
08 Aug 2023 13:52:12,411 INFO : Inserting MLF1_HUMAN
08 Aug 2023 13:52:12,416 INFO : 76% Done
08 Aug 2023 13:52:12,468 INFO : 77% Done
08 Aug 2023 13:52:12,517 INFO : Inserting MVP_HUMAN
08 Aug 2023 13:52:12,521 INFO : 79% Done
08 Aug 2023 13:52:12,572 INFO : 80% Done
08 Aug 2023 13:52:12,611 INFO : Inserting ODO2_HUMAN
08 Aug 2023 13:52:12,616 INFO : 81% Done
08 Aug 2023 13:52:12,667 INFO : 83% Done
08 Aug 2023 13:52:12,715 INFO : Inserting PFKAL_HUMAN
08 Aug 2023 13:52:12,719 INFO : 84% Done
08 Aug 2023 13:52:12,768 INFO : Inserting PGK1_HUMAN
08 Aug 2023 13:52:12,772 INFO : 86% Done
08 Aug 2023 13:52:12,828 INFO : 87% Done
08 Aug 2023 13:52:12,876 INFO : Inserting PGM1_HUMAN
08 Aug 2023 13:52:12,880 INFO : 88% Done
08 Aug 2023 13:52:12,927 INFO : Inserting PSPB_HUMAN
08 Aug 2023 13:52:12,931 INFO : 90% Done
08 Aug 2023 13:52:12,970 INFO : Inserting PYGB_HUMAN
08 Aug 2023 13:52:12,974 INFO : 91% Done
08 Aug 2023 13:52:13,012 INFO : Inserting S10A2_HUMAN
08 Aug 2023 13:52:13,017 INFO : 92% Done
08 Aug 2023 13:52:13,065 INFO : Inserting UBA1_HUMAN
08 Aug 2023 13:52:13,070 INFO : 94% Done
08 Aug 2023 13:52:13,123 INFO : 95% Done
08 Aug 2023 13:52:13,171 INFO : Inserting UGPA_HUMAN
08 Aug 2023 13:52:13,176 INFO : 97% Done
08 Aug 2023 13:52:13,227 INFO : 98% Done
08 Aug 2023 13:52:13,276 INFO : Done parsing Skyline document.
08 Aug 2023 13:52:13,276 INFO : Creating and populating temp tables for Proportion values
08 Aug 2023 13:52:13,376 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
08 Aug 2023 13:52:13,529 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
08 Aug 2023 13:52:13,592 INFO : Cleaning up temp tables
08 Aug 2023 13:52:13,832 INFO : Completed import of Skyline document from Batch1_Brushing_2023-08-07_14-38-16.sky.zip
08 Aug 2023 13:52:13,835 INFO : 100% Done
08 Aug 2023 13:52:13,858 INFO : Done importing xar
08 Aug 2023 13:52:13,859 INFO : Loading pages and webpart properties
08 Aug 2023 13:52:13,914 INFO : Done importing 3 page(s) with 5 webpart(s)
08 Aug 2023 13:52:13,914 INFO : Loading File Browser config
08 Aug 2023 13:52:13,914 INFO : Done importing File Browser config
08 Aug 2023 13:52:13,915 INFO : Starting Sample Status Data import
08 Aug 2023 13:52:13,915 INFO : No sample types XAR file to process.
08 Aug 2023 13:52:13,916 INFO : Finished importing Sample Status Data
08 Aug 2023 13:52:13,919 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
08 Aug 2023 13:52:13,922 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
08 Aug 2023 13:52:13,923 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
08 Aug 2023 13:52:13,923 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
08 Aug 2023 13:52:13,923 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
08 Aug 2023 13:52:13,923 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
08 Aug 2023 13:52:13,926 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
08 Aug 2023 13:52:13,933 INFO : Moving files to folder /Panorama Public/2023/PNNL - Signature_of_lung_cancer_risk and creating symlinks
08 Aug 2023 13:52:13,977 INFO : Aligning data files urls in folder: /Panorama Public/2023/PNNL - Signature_of_lung_cancer_risk
08 Aug 2023 13:52:14,006 INFO : Importing files metadata.
08 Aug 2023 13:52:14,007 INFO :
08 Aug 2023 13:52:14,007 INFO : Experiment import completed successfully.
08 Aug 2023 13:52:14,007 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
08 Aug 2023 13:52:14,025 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
08 Aug 2023 13:52:14,025 INFO :
08 Aug 2023 13:52:14,025 INFO : Checking for library folders.
08 Aug 2023 13:52:14,026 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
08 Aug 2023 13:52:14,041 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
08 Aug 2023 13:52:14,041 INFO :
08 Aug 2023 13:52:14,041 INFO : Finishing up experiment copy.
08 Aug 2023 13:52:14,047 INFO : Updating TargetedMS experiment entry in target folder /Panorama Public/2023/PNNL - Signature_of_lung_cancer_risk
08 Aug 2023 13:52:14,047 INFO : Setting version on new experiment to 2
08 Aug 2023 13:52:14,049 INFO : Updating permanent link to point to the new copy of the data.
08 Aug 2023 13:52:14,051 INFO : Removing copy permissions given to Panorama Public
08 Aug 2023 13:52:14,060 INFO : Adding read permissions to all users that are folder admins in the source folder.
08 Aug 2023 13:52:14,061 INFO : Adding read permissions to all users that had read access to previous copy.
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to yuqian.gao@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to matthew.monroe@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to tao.liu@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to panorama+reviewer197@proteinms.net
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to tujin.shi@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning ReaderRole to yi-ting.wang@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning PanoramaPublicSubmitterRole to yuqian.gao@pnnl.gov
08 Aug 2023 13:52:14,061 INFO : Assigning PanoramaPublicSubmitterRole to tao.liu@pnnl.gov
08 Aug 2023 13:52:14,068 INFO : User yuqian.gao@pnnl.gov is already a member of group Panorama Public Submitters
08 Aug 2023 13:52:14,069 INFO : User tao.liu@pnnl.gov is already a member of group Panorama Public Submitters
08 Aug 2023 13:52:14,069 INFO : Updating the 'Raw Data' tab configuration
08 Aug 2023 13:52:14,069 INFO : Hiding the Data Pipeline tab.
08 Aug 2023 13:52:14,073 INFO : Creating a new versioned URL for the previous copy of the data: Signature_of_lung_cancer_risk_v1
08 Aug 2023 13:52:14,077 INFO : Setting the permanent link on the previous copy to Signature_of_lung_cancer_risk_v1
08 Aug 2023 13:52:14,079 INFO : Updating Submission. Setting copiedExperimentId to 1664
08 Aug 2023 13:52:15,387 INFO : Copying DOI from the previous copy of the data.
08 Aug 2023 13:52:15,387 INFO : Removing DOI from the previous copy
08 Aug 2023 13:52:15,441 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'