20 Jul 2023 17:34:00,342 INFO : Copying experiment "Breeding from 1891 to 2010 did not increase the content of amylase/trypsin-inhibitors in wheat (Triticum aestivum L.)" from folder /KIT - Food Chemistry/WheatScan - ATI to /Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI
20 Jul 2023 17:34:00,342 INFO : =======================================
20 Jul 2023 17:34:00,355 DEBUG: Resetting Job ID: c9f5ce34-098b-103c-afc6-fea6ddf51ba4
20 Jul 2023 17:34:00,374 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'
20 Jul 2023 17:34:00,374 INFO :
20 Jul 2023 17:34:00,374 INFO : Exporting experiment.
20 Jul 2023 17:41:23,422 INFO : Exporting files metadata.
20 Jul 2023 17:41:23,422 DEBUG: [/KIT - Food Chemistry/WheatScan - ATI] Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export
20 Jul 2023 17:41:23,425 DEBUG: [/KIT - Food Chemistry/WheatScan - ATI/Year 2015] Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2015
20 Jul 2023 17:41:23,585 DEBUG: [/KIT - Food Chemistry/WheatScan - ATI/Year 2017] Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2017
20 Jul 2023 17:41:23,730 DEBUG: [/KIT - Food Chemistry/WheatScan - ATI/Year 2019] Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2019
20 Jul 2023 17:41:23,873 INFO :
20 Jul 2023 17:41:23,873 INFO : Experiment export completed successfully.
20 Jul 2023 17:41:23,873 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'
20 Jul 2023 17:41:25,984 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'
20 Jul 2023 17:41:25,984 INFO :
20 Jul 2023 17:41:25,984 INFO : Importing experiment.
20 Jul 2023 17:41:25,985 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export
20 Jul 2023 17:41:25,986 INFO : Loading folder properties (folder type, settings and active modules)
20 Jul 2023 17:41:25,987 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI] Folder type: Targeted MS
20 Jul 2023 17:41:25,987 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI] Active modules: PanoramaPublic, Wiki, Experiment, API, Query, Announcements, Pipeline, Assay, MS2, Core, Search, FileContent, Issues, TargetedMS
20 Jul 2023 17:41:26,062 INFO : Done importing folder properties (folder type, settings and active modules)
20 Jul 2023 17:41:26,063 INFO : Loading container specific module properties
20 Jul 2023 17:41:26,066 INFO : Done importing container specific module properties
20 Jul 2023 17:41:26,067 INFO : Loading etl definitions
20 Jul 2023 17:41:26,068 INFO : Loading wikis
20 Jul 2023 17:41:26,069 INFO : 0 wikis imported
20 Jul 2023 17:41:26,069 INFO : Done importing wikis
20 Jul 2023 17:41:26,069 INFO : Starting to copy files
20 Jul 2023 17:41:26,071 INFO : Copied 1 files
20 Jul 2023 17:41:26,071 INFO : Ensuring exp.data rows exist for imported files
20 Jul 2023 17:41:26,087 INFO : Starting Sample Type and Data Class import
20 Jul 2023 17:41:26,087 INFO : No types XAR file to process.
20 Jul 2023 17:41:26,087 INFO : Finished importing Sample Types and Data Classes
20 Jul 2023 17:41:26,088 INFO : Loading xar
20 Jul 2023 17:41:26,092 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-11898:Breeding+from+1891+to+2010+did+not+increase+the+content+of+amylase%2Ftrypsin-inhibitors+in+wheat+%28Triticum+aestivum+L.%29'
20 Jul 2023 17:41:26,092 DEBUG: Experiment/Run group import complete
20 Jul 2023 17:41:26,092 INFO : Done importing xar
20 Jul 2023 17:41:26,093 INFO : Loading pages and webpart properties
20 Jul 2023 17:41:26,146 INFO : Done importing 3 page(s) with 4 webpart(s)
20 Jul 2023 17:41:26,146 INFO : Loading File Browser config
20 Jul 2023 17:41:26,146 INFO : Done importing File Browser config
20 Jul 2023 17:41:26,147 INFO : Starting Sample Status Data import
20 Jul 2023 17:41:26,147 INFO : No sample types XAR file to process.
20 Jul 2023 17:41:26,147 INFO : Finished importing Sample Status Data
20 Jul 2023 17:41:26,151 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:41:26,153 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
20 Jul 2023 17:41:26,153 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
20 Jul 2023 17:41:26,154 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
20 Jul 2023 17:41:26,154 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
20 Jul 2023 17:41:26,154 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:41:26,155 INFO : Loading subfolders and container tabs
20 Jul 2023 17:41:26,212 INFO : New folder created with inherited permissions: /Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2015
20 Jul 2023 17:41:26,213 INFO : Loading folder archive for Year 2015
20 Jul 2023 17:41:26,213 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2015] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2015
20 Jul 2023 17:41:26,214 INFO : Loading folder properties (folder type, settings and active modules)
20 Jul 2023 17:41:26,214 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2015] Folder type: Targeted MS
20 Jul 2023 17:41:26,214 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2015] Active modules: PanoramaPublic, Wiki, Experiment, API, Query, Announcements, Pipeline, Assay, MS2, Core, Search, FileContent, Issues, TargetedMS
20 Jul 2023 17:41:26,279 INFO : Done importing folder properties (folder type, settings and active modules)
20 Jul 2023 17:41:26,281 INFO : Loading container specific module properties
20 Jul 2023 17:41:26,285 INFO : Done importing container specific module properties
20 Jul 2023 17:41:26,286 INFO : Loading etl definitions
20 Jul 2023 17:41:26,287 INFO : Loading wikis
20 Jul 2023 17:41:26,288 INFO : 0 wikis imported
20 Jul 2023 17:41:26,288 INFO : Done importing wikis
20 Jul 2023 17:41:26,289 INFO : Starting to copy files
20 Jul 2023 17:43:26,845 INFO : 270 files copied, now copying 190417-21.raw
20 Jul 2023 17:43:28,106 INFO : 273 files copied, now copying ATI_Year2015_08-12.sky
20 Jul 2023 17:43:28,244 INFO : 276 files copied, now copying ATI_Year2015_52-59.skyd
20 Jul 2023 17:43:28,515 INFO : 279 files copied, now copying ATI_Year2015_44-51.sky.view
20 Jul 2023 17:43:28,537 INFO : 282 files copied, now copying ATI_Year2015_36-43.skyd
20 Jul 2023 17:43:28,796 INFO : 285 files copied, now copying ATI_Year2015_01-07.sky.view
20 Jul 2023 17:43:28,820 INFO : 288 files copied, now copying ATI_Year2015_13-19.sky
20 Jul 2023 17:43:28,847 INFO : 291 files copied, now copying ATI_Year2015_60.sky.view
20 Jul 2023 17:43:29,095 INFO : 294 files copied, now copying ATI_Year2015_20-27.sky
20 Jul 2023 17:43:29,115 INFO : Copied 297 files
20 Jul 2023 17:43:29,115 INFO : Ensuring exp.data rows exist for imported files
20 Jul 2023 17:43:30,214 INFO : Starting Sample Type and Data Class import
20 Jul 2023 17:43:30,214 INFO : No types XAR file to process.
20 Jul 2023 17:43:30,214 INFO : Finished importing Sample Types and Data Classes
20 Jul 2023 17:43:30,215 INFO : Loading xar
20 Jul 2023 17:43:31,326 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,328 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,330 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,330 DEBUG: Protocol import complete
20 Jul 2023 17:43:31,339 DEBUG: Protocol action set import complete
20 Jul 2023 17:43:31,358 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,363 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:e19e0ab5-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,366 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:e19e0a9a-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,366 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,369 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,369 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:e19e0adf-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,373 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,376 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:e19e15a4-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,379 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:e19e1592-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,379 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,381 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,381 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:e19e15cf-5109-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,385 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,389 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:e358eb7f-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,392 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:e358e94c-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,392 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,394 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,394 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:e358ebc0-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,398 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,401 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:e358f0ad-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,404 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:e358f09e-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,404 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,405 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,406 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:e358f0cd-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,409 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,412 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:e358f61b-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,415 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:e358f5fa-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,415 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,417 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,417 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:e358f65f-510c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,420 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,424 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:bcbae989-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,426 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:bcbae973-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,426 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,428 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,428 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:bcbae9ec-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,431 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,435 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:bcbaedec-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,438 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:bcbaeda5-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,438 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,440 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,440 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:bcbaee1e-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,443 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,447 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:bcbaf123-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,449 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:bcbaf108-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,449 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,451 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,451 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:bcbaf147-510e-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,454 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip'
20 Jul 2023 17:43:31,458 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11899:b0f36650-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,461 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11899:b0f3663c-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,461 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:43:31,462 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11899:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:43:31,463 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11899:b0f36692-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:43:31,464 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125022/ATI_Year2015_01-07_2022-01-06_11-33-22/ATI_Year2015_01-07.skyd into the system
20 Jul 2023 17:43:31,465 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125022/ATI_Year2015_01-07_2022-01-06_11-33-22/ATI_Year2015_01-07.skyd into the system
20 Jul 2023 17:43:31,465 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125022/ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip into the system
20 Jul 2023 17:43:31,467 INFO : Starting import from ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip
20 Jul 2023 17:43:31,471 INFO : Starting to import Skyline document from ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip
20 Jul 2023 17:43:31,475 INFO : Expanding ATI_Year2015_01-07.skyd
20 Jul 2023 17:43:31,561 INFO : Expanding ATI_Year2015_01-07.sky.view
20 Jul 2023 17:43:31,562 INFO : Expanding ATI_Year2015_01-07.sky
20 Jul 2023 17:43:31,574 INFO : 1% Done
20 Jul 2023 17:43:31,629 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:31,631 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:31,790 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:31,800 INFO : 7% Done
20 Jul 2023 17:43:31,876 INFO : 12% Done
20 Jul 2023 17:43:31,940 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:31,940 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:31,948 INFO : 18% Done
20 Jul 2023 17:43:32,017 INFO : 23% Done
20 Jul 2023 17:43:32,080 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:32,080 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:32,088 INFO : 25% Done
20 Jul 2023 17:43:32,137 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:32,137 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:32,144 INFO : 28% Done
20 Jul 2023 17:43:32,182 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:32,182 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:32,189 INFO : 33% Done
20 Jul 2023 17:43:32,248 INFO : 35% Done
20 Jul 2023 17:43:32,287 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:32,287 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:32,295 INFO : 41% Done
20 Jul 2023 17:43:32,363 INFO : 46% Done
20 Jul 2023 17:43:32,426 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:32,426 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:32,434 INFO : 51% Done
20 Jul 2023 17:43:32,495 INFO : 56% Done
20 Jul 2023 17:43:32,563 INFO : 62% Done
20 Jul 2023 17:43:32,627 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:32,627 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:32,635 INFO : 67% Done
20 Jul 2023 17:43:32,691 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:32,691 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:32,699 INFO : 69% Done
20 Jul 2023 17:43:32,739 INFO : 72% Done
20 Jul 2023 17:43:32,777 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:32,777 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:32,785 INFO : 76% Done
20 Jul 2023 17:43:32,844 INFO : 81% Done
20 Jul 2023 17:43:32,907 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:32,908 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:32,913 INFO : 84% Done
20 Jul 2023 17:43:32,933 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:32,933 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:32,940 INFO : 87% Done
20 Jul 2023 17:43:32,988 INFO : 92% Done
20 Jul 2023 17:43:33,043 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:33,043 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:33,048 INFO : 95% Done
20 Jul 2023 17:43:33,097 INFO : 98% Done
20 Jul 2023 17:43:33,136 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:33,138 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:33,138 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:33,227 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:33,277 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:33,296 INFO : Cleaning up temp tables
20 Jul 2023 17:43:33,576 INFO : Completed import of Skyline document from ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip
20 Jul 2023 17:43:33,578 INFO : 100% Done
20 Jul 2023 17:43:33,582 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125022/ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip into the system
20 Jul 2023 17:43:33,582 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125023/ATI_Year2015_08-12_2022-01-06_11-38-34/ATI_Year2015_08-12.skyd into the system
20 Jul 2023 17:43:33,582 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125023/ATI_Year2015_08-12_2022-01-06_11-38-34/ATI_Year2015_08-12.skyd into the system
20 Jul 2023 17:43:33,582 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125023/ATI_Year2015_08-12_2022-01-06_11-38-34.sky.zip into the system
20 Jul 2023 17:43:33,584 INFO : Starting import from ATI_Year2015_08-12_2022-01-06_11-38-34.sky.zip
20 Jul 2023 17:43:33,586 INFO : Starting to import Skyline document from ATI_Year2015_08-12_2022-01-06_11-38-34.sky.zip
20 Jul 2023 17:43:33,588 INFO : Expanding ATI_Year2015_08-12.skyd
20 Jul 2023 17:43:33,642 INFO : Expanding ATI_Year2015_08-12.sky.view
20 Jul 2023 17:43:33,642 INFO : Expanding ATI_Year2015_08-12.sky
20 Jul 2023 17:43:33,654 INFO : 1% Done
20 Jul 2023 17:43:33,697 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:33,699 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:33,842 INFO : 2% Done
20 Jul 2023 17:43:33,842 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:33,847 INFO : 6% Done
20 Jul 2023 17:43:33,897 INFO : 12% Done
20 Jul 2023 17:43:33,949 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:33,950 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:33,955 INFO : 17% Done
20 Jul 2023 17:43:34,010 INFO : 22% Done
20 Jul 2023 17:43:34,061 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,061 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:34,066 INFO : 25% Done
20 Jul 2023 17:43:34,104 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:34,104 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:34,110 INFO : 29% Done
20 Jul 2023 17:43:34,148 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:34,148 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:34,154 INFO : 34% Done
20 Jul 2023 17:43:34,202 INFO : 36% Done
20 Jul 2023 17:43:34,233 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,234 INFO : 37% Done
20 Jul 2023 17:43:34,234 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:34,240 INFO : 42% Done
20 Jul 2023 17:43:34,294 INFO : 47% Done
20 Jul 2023 17:43:34,345 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,345 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:34,351 INFO : 52% Done
20 Jul 2023 17:43:34,401 INFO : 58% Done
20 Jul 2023 17:43:34,457 INFO : 62% Done
20 Jul 2023 17:43:34,502 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:34,503 INFO : 63% Done
20 Jul 2023 17:43:34,503 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:34,508 INFO : 67% Done
20 Jul 2023 17:43:34,554 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:34,554 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:34,558 INFO : 70% Done
20 Jul 2023 17:43:34,590 INFO : 73% Done
20 Jul 2023 17:43:34,620 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,620 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:34,627 INFO : 76% Done
20 Jul 2023 17:43:34,667 INFO : 81% Done
20 Jul 2023 17:43:34,719 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,719 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:34,724 INFO : 84% Done
20 Jul 2023 17:43:34,741 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:34,741 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:34,746 INFO : 88% Done
20 Jul 2023 17:43:34,787 INFO : 92% Done
20 Jul 2023 17:43:34,831 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,832 INFO : 93% Done
20 Jul 2023 17:43:34,832 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:34,836 INFO : 95% Done
20 Jul 2023 17:43:34,868 INFO : 98% Done
20 Jul 2023 17:43:34,900 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:34,902 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:34,903 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:34,986 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:35,026 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:35,040 INFO : Cleaning up temp tables
20 Jul 2023 17:43:35,262 INFO : Completed import of Skyline document from ATI_Year2015_08-12_2022-01-06_11-38-34.sky.zip
20 Jul 2023 17:43:35,264 INFO : 100% Done
20 Jul 2023 17:43:35,267 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125023/ATI_Year2015_08-12_2022-01-06_11-38-34.sky.zip into the system
20 Jul 2023 17:43:35,267 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125025/ATI_Year2015_13-19_2022-01-06_11-54-00/ATI_Year2015_13-19.skyd into the system
20 Jul 2023 17:43:35,268 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125025/ATI_Year2015_13-19_2022-01-06_11-54-00/ATI_Year2015_13-19.skyd into the system
20 Jul 2023 17:43:35,268 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125025/ATI_Year2015_13-19_2022-01-06_11-54-00.sky.zip into the system
20 Jul 2023 17:43:35,270 INFO : Starting import from ATI_Year2015_13-19_2022-01-06_11-54-00.sky.zip
20 Jul 2023 17:43:35,271 INFO : Starting to import Skyline document from ATI_Year2015_13-19_2022-01-06_11-54-00.sky.zip
20 Jul 2023 17:43:35,274 INFO : Expanding ATI_Year2015_13-19.skyd
20 Jul 2023 17:43:35,343 INFO : Expanding ATI_Year2015_13-19.sky.view
20 Jul 2023 17:43:35,343 INFO : Expanding ATI_Year2015_13-19.sky
20 Jul 2023 17:43:35,352 INFO : 1% Done
20 Jul 2023 17:43:35,406 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:35,409 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:35,555 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:35,561 INFO : 6% Done
20 Jul 2023 17:43:35,620 INFO : 12% Done
20 Jul 2023 17:43:35,682 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:35,682 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:35,688 INFO : 17% Done
20 Jul 2023 17:43:35,754 INFO : 23% Done
20 Jul 2023 17:43:35,817 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:35,817 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:35,822 INFO : 25% Done
20 Jul 2023 17:43:35,867 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:35,867 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:35,872 INFO : 29% Done
20 Jul 2023 17:43:35,919 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:35,920 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:35,926 INFO : 34% Done
20 Jul 2023 17:43:35,984 INFO : 37% Done
20 Jul 2023 17:43:36,020 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,020 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:36,026 INFO : 42% Done
20 Jul 2023 17:43:36,091 INFO : 48% Done
20 Jul 2023 17:43:36,155 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,155 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:36,161 INFO : 53% Done
20 Jul 2023 17:43:36,222 INFO : 58% Done
20 Jul 2023 17:43:36,287 INFO : 63% Done
20 Jul 2023 17:43:36,341 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:36,341 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:36,346 INFO : 68% Done
20 Jul 2023 17:43:36,402 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:36,402 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:36,407 INFO : 71% Done
20 Jul 2023 17:43:36,445 INFO : 74% Done
20 Jul 2023 17:43:36,482 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,482 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:36,487 INFO : 77% Done
20 Jul 2023 17:43:36,536 INFO : 81% Done
20 Jul 2023 17:43:36,589 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,589 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:36,594 INFO : 84% Done
20 Jul 2023 17:43:36,615 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:36,615 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:36,620 INFO : 88% Done
20 Jul 2023 17:43:36,669 INFO : 92% Done
20 Jul 2023 17:43:36,723 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,725 INFO : 93% Done
20 Jul 2023 17:43:36,725 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:36,729 INFO : 95% Done
20 Jul 2023 17:43:36,768 INFO : 98% Done
20 Jul 2023 17:43:36,805 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:36,810 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:36,811 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:36,895 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:36,946 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:36,963 INFO : Cleaning up temp tables
20 Jul 2023 17:43:37,192 INFO : Completed import of Skyline document from ATI_Year2015_13-19_2022-01-06_11-54-00.sky.zip
20 Jul 2023 17:43:37,194 INFO : 100% Done
20 Jul 2023 17:43:37,198 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125025/ATI_Year2015_13-19_2022-01-06_11-54-00.sky.zip into the system
20 Jul 2023 17:43:37,198 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125026/ATI_Year2015_20-27_2022-01-06_11-56-21/ATI_Year2015_20-27.skyd into the system
20 Jul 2023 17:43:37,198 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125026/ATI_Year2015_20-27_2022-01-06_11-56-21/ATI_Year2015_20-27.skyd into the system
20 Jul 2023 17:43:37,198 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125026/ATI_Year2015_20-27_2022-01-06_11-56-21.sky.zip into the system
20 Jul 2023 17:43:37,200 INFO : Starting import from ATI_Year2015_20-27_2022-01-06_11-56-21.sky.zip
20 Jul 2023 17:43:37,202 INFO : Starting to import Skyline document from ATI_Year2015_20-27_2022-01-06_11-56-21.sky.zip
20 Jul 2023 17:43:37,205 INFO : Expanding ATI_Year2015_20-27.skyd
20 Jul 2023 17:43:37,280 INFO : Expanding ATI_Year2015_20-27.sky.view
20 Jul 2023 17:43:37,280 INFO : Expanding ATI_Year2015_20-27.sky
20 Jul 2023 17:43:37,294 INFO : 1% Done
20 Jul 2023 17:43:37,354 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:37,357 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:37,530 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:37,539 INFO : 6% Done
20 Jul 2023 17:43:37,615 INFO : 11% Done
20 Jul 2023 17:43:37,675 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:37,675 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:37,682 INFO : 17% Done
20 Jul 2023 17:43:37,752 INFO : 22% Done
20 Jul 2023 17:43:37,810 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:37,810 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:37,815 INFO : 25% Done
20 Jul 2023 17:43:37,863 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:37,863 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:37,869 INFO : 28% Done
20 Jul 2023 17:43:37,908 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:37,908 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:37,914 INFO : 32% Done
20 Jul 2023 17:43:37,965 INFO : 36% Done
20 Jul 2023 17:43:38,012 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,012 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:38,019 INFO : 42% Done
20 Jul 2023 17:43:38,087 INFO : 48% Done
20 Jul 2023 17:43:38,155 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,155 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:38,161 INFO : 54% Done
20 Jul 2023 17:43:38,226 INFO : 59% Done
20 Jul 2023 17:43:38,286 INFO : 63% Done
20 Jul 2023 17:43:38,335 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:38,335 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:38,340 INFO : 68% Done
20 Jul 2023 17:43:38,400 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:38,400 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:38,405 INFO : 71% Done
20 Jul 2023 17:43:38,446 INFO : 74% Done
20 Jul 2023 17:43:38,484 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,484 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:38,490 INFO : 76% Done
20 Jul 2023 17:43:38,532 INFO : 81% Done
20 Jul 2023 17:43:38,589 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,589 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:38,593 INFO : 84% Done
20 Jul 2023 17:43:38,615 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:38,615 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:38,620 INFO : 88% Done
20 Jul 2023 17:43:38,671 INFO : 92% Done
20 Jul 2023 17:43:38,720 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,720 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:38,724 INFO : 95% Done
20 Jul 2023 17:43:38,767 INFO : 98% Done
20 Jul 2023 17:43:38,806 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:38,807 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:38,808 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:38,893 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:38,950 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:38,970 INFO : Cleaning up temp tables
20 Jul 2023 17:43:39,199 INFO : Completed import of Skyline document from ATI_Year2015_20-27_2022-01-06_11-56-21.sky.zip
20 Jul 2023 17:43:39,201 INFO : 100% Done
20 Jul 2023 17:43:39,205 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125026/ATI_Year2015_20-27_2022-01-06_11-56-21.sky.zip into the system
20 Jul 2023 17:43:39,205 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125027/ATI_Year2015_28-35_2022-01-06_11-58-04/ATI_Year2015_28-35.skyd into the system
20 Jul 2023 17:43:39,206 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125027/ATI_Year2015_28-35_2022-01-06_11-58-04/ATI_Year2015_28-35.skyd into the system
20 Jul 2023 17:43:39,206 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125027/ATI_Year2015_28-35_2022-01-06_11-58-04.sky.zip into the system
20 Jul 2023 17:43:39,206 INFO : Starting import from ATI_Year2015_28-35_2022-01-06_11-58-04.sky.zip
20 Jul 2023 17:43:39,208 INFO : Starting to import Skyline document from ATI_Year2015_28-35_2022-01-06_11-58-04.sky.zip
20 Jul 2023 17:43:39,211 INFO : Expanding ATI_Year2015_28-35.skyd
20 Jul 2023 17:43:39,283 INFO : Expanding ATI_Year2015_28-35.sky.view
20 Jul 2023 17:43:39,284 INFO : Expanding ATI_Year2015_28-35.sky
20 Jul 2023 17:43:39,294 INFO : 1% Done
20 Jul 2023 17:43:39,350 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:39,353 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:39,507 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:39,517 INFO : 7% Done
20 Jul 2023 17:43:39,591 INFO : 12% Done
20 Jul 2023 17:43:39,660 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:39,660 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:39,667 INFO : 17% Done
20 Jul 2023 17:43:39,742 INFO : 22% Done
20 Jul 2023 17:43:39,812 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:39,812 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:39,818 INFO : 25% Done
20 Jul 2023 17:43:39,874 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:39,874 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:39,880 INFO : 29% Done
20 Jul 2023 17:43:39,945 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:39,946 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:39,951 INFO : 32% Done
20 Jul 2023 17:43:39,995 INFO : 36% Done
20 Jul 2023 17:43:40,059 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,059 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:40,066 INFO : 41% Done
20 Jul 2023 17:43:40,150 INFO : 47% Done
20 Jul 2023 17:43:40,220 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,220 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:40,227 INFO : 51% Done
20 Jul 2023 17:43:40,300 INFO : 57% Done
20 Jul 2023 17:43:40,371 INFO : 61% Done
20 Jul 2023 17:43:40,430 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:40,430 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:40,436 INFO : 66% Done
20 Jul 2023 17:43:40,498 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:40,498 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:40,504 INFO : 71% Done
20 Jul 2023 17:43:40,573 INFO : 74% Done
20 Jul 2023 17:43:40,611 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,611 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:40,617 INFO : 77% Done
20 Jul 2023 17:43:40,679 INFO : 82% Done
20 Jul 2023 17:43:40,747 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,747 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:40,752 INFO : 85% Done
20 Jul 2023 17:43:40,774 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:40,774 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:40,780 INFO : 88% Done
20 Jul 2023 17:43:40,832 INFO : 92% Done
20 Jul 2023 17:43:40,881 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,881 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:40,886 INFO : 95% Done
20 Jul 2023 17:43:40,938 INFO : 98% Done
20 Jul 2023 17:43:40,978 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:40,978 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:40,979 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:41,060 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:41,112 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:41,131 INFO : Cleaning up temp tables
20 Jul 2023 17:43:41,372 INFO : Completed import of Skyline document from ATI_Year2015_28-35_2022-01-06_11-58-04.sky.zip
20 Jul 2023 17:43:41,375 INFO : 100% Done
20 Jul 2023 17:43:41,378 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125027/ATI_Year2015_28-35_2022-01-06_11-58-04.sky.zip into the system
20 Jul 2023 17:43:41,379 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125028/ATI_Year2015_36-43_2022-01-06_12-15-18/ATI_Year2015_36-43.skyd into the system
20 Jul 2023 17:43:41,379 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125028/ATI_Year2015_36-43_2022-01-06_12-15-18/ATI_Year2015_36-43.skyd into the system
20 Jul 2023 17:43:41,379 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125028/ATI_Year2015_36-43_2022-01-06_12-15-18.sky.zip into the system
20 Jul 2023 17:43:41,380 INFO : Starting import from ATI_Year2015_36-43_2022-01-06_12-15-18.sky.zip
20 Jul 2023 17:43:41,381 INFO : Starting to import Skyline document from ATI_Year2015_36-43_2022-01-06_12-15-18.sky.zip
20 Jul 2023 17:43:41,384 INFO : Expanding ATI_Year2015_36-43.skyd
20 Jul 2023 17:43:41,455 INFO : Expanding ATI_Year2015_36-43.sky.view
20 Jul 2023 17:43:41,456 INFO : Expanding ATI_Year2015_36-43.sky
20 Jul 2023 17:43:41,468 INFO : 1% Done
20 Jul 2023 17:43:41,525 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:41,527 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:41,675 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:41,681 INFO : 7% Done
20 Jul 2023 17:43:41,744 INFO : 12% Done
20 Jul 2023 17:43:41,801 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:41,801 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:41,807 INFO : 18% Done
20 Jul 2023 17:43:41,876 INFO : 23% Done
20 Jul 2023 17:43:41,933 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:41,933 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:41,938 INFO : 25% Done
20 Jul 2023 17:43:41,977 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:41,977 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:41,982 INFO : 28% Done
20 Jul 2023 17:43:42,020 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:42,020 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:42,025 INFO : 31% Done
20 Jul 2023 17:43:42,068 INFO : 36% Done
20 Jul 2023 17:43:42,125 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,125 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:42,131 INFO : 42% Done
20 Jul 2023 17:43:42,202 INFO : 49% Done
20 Jul 2023 17:43:42,269 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,269 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:42,275 INFO : 54% Done
20 Jul 2023 17:43:42,340 INFO : 59% Done
20 Jul 2023 17:43:42,401 INFO : 65% Done
20 Jul 2023 17:43:42,458 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:42,458 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:42,464 INFO : 69% Done
20 Jul 2023 17:43:42,515 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:42,515 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:42,520 INFO : 72% Done
20 Jul 2023 17:43:42,561 INFO : 74% Done
20 Jul 2023 17:43:42,601 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,601 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:42,606 INFO : 77% Done
20 Jul 2023 17:43:42,648 INFO : 81% Done
20 Jul 2023 17:43:42,696 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,697 INFO : 82% Done
20 Jul 2023 17:43:42,697 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:42,701 INFO : 85% Done
20 Jul 2023 17:43:42,723 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:42,723 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:42,728 INFO : 88% Done
20 Jul 2023 17:43:42,770 INFO : 92% Done
20 Jul 2023 17:43:42,818 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,818 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:42,822 INFO : 95% Done
20 Jul 2023 17:43:42,863 INFO : 98% Done
20 Jul 2023 17:43:42,903 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:42,904 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:42,904 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:42,981 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:43,037 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:43,056 INFO : Cleaning up temp tables
20 Jul 2023 17:43:43,285 INFO : Completed import of Skyline document from ATI_Year2015_36-43_2022-01-06_12-15-18.sky.zip
20 Jul 2023 17:43:43,288 INFO : 100% Done
20 Jul 2023 17:43:43,291 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125028/ATI_Year2015_36-43_2022-01-06_12-15-18.sky.zip into the system
20 Jul 2023 17:43:43,292 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125029/ATI_Year2015_44-51_2022-01-06_12-16-49/ATI_Year2015_44-51.skyd into the system
20 Jul 2023 17:43:43,292 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125029/ATI_Year2015_44-51_2022-01-06_12-16-49/ATI_Year2015_44-51.skyd into the system
20 Jul 2023 17:43:43,292 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125029/ATI_Year2015_44-51_2022-01-06_12-16-49.sky.zip into the system
20 Jul 2023 17:43:43,293 INFO : Starting import from ATI_Year2015_44-51_2022-01-06_12-16-49.sky.zip
20 Jul 2023 17:43:43,294 INFO : Starting to import Skyline document from ATI_Year2015_44-51_2022-01-06_12-16-49.sky.zip
20 Jul 2023 17:43:43,297 INFO : Expanding ATI_Year2015_44-51.skyd
20 Jul 2023 17:43:43,369 INFO : Expanding ATI_Year2015_44-51.sky.view
20 Jul 2023 17:43:43,370 INFO : Expanding ATI_Year2015_44-51.sky
20 Jul 2023 17:43:43,381 INFO : 1% Done
20 Jul 2023 17:43:43,440 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:43,443 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:43,595 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:43,602 INFO : 6% Done
20 Jul 2023 17:43:43,665 INFO : 11% Done
20 Jul 2023 17:43:43,722 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:43,722 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:43,728 INFO : 17% Done
20 Jul 2023 17:43:43,800 INFO : 22% Done
20 Jul 2023 17:43:43,857 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:43,857 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:43,862 INFO : 25% Done
20 Jul 2023 17:43:43,910 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:43,910 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:43,915 INFO : 28% Done
20 Jul 2023 17:43:43,963 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:43,963 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:43,969 INFO : 32% Done
20 Jul 2023 17:43:44,021 INFO : 37% Done
20 Jul 2023 17:43:44,077 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,077 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:44,084 INFO : 43% Done
20 Jul 2023 17:43:44,153 INFO : 48% Done
20 Jul 2023 17:43:44,217 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,217 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:44,223 INFO : 53% Done
20 Jul 2023 17:43:44,289 INFO : 58% Done
20 Jul 2023 17:43:44,351 INFO : 62% Done
20 Jul 2023 17:43:44,400 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:44,400 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:44,406 INFO : 67% Done
20 Jul 2023 17:43:44,468 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:44,468 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:44,473 INFO : 70% Done
20 Jul 2023 17:43:44,516 INFO : 73% Done
20 Jul 2023 17:43:44,556 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,556 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:44,562 INFO : 77% Done
20 Jul 2023 17:43:44,625 INFO : 81% Done
20 Jul 2023 17:43:44,689 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,689 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:44,695 INFO : 84% Done
20 Jul 2023 17:43:44,718 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:44,718 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:44,723 INFO : 87% Done
20 Jul 2023 17:43:44,768 INFO : 91% Done
20 Jul 2023 17:43:44,817 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,817 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:44,822 INFO : 95% Done
20 Jul 2023 17:43:44,875 INFO : 98% Done
20 Jul 2023 17:43:44,917 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:44,918 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:44,918 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:44,997 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:45,054 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:45,073 INFO : Cleaning up temp tables
20 Jul 2023 17:43:45,339 INFO : Completed import of Skyline document from ATI_Year2015_44-51_2022-01-06_12-16-49.sky.zip
20 Jul 2023 17:43:45,341 INFO : 100% Done
20 Jul 2023 17:43:45,345 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125029/ATI_Year2015_44-51_2022-01-06_12-16-49.sky.zip into the system
20 Jul 2023 17:43:45,345 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125030/ATI_Year2015_52-59_2022-01-06_12-18-04/ATI_Year2015_52-59.skyd into the system
20 Jul 2023 17:43:45,345 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125030/ATI_Year2015_52-59_2022-01-06_12-18-04/ATI_Year2015_52-59.skyd into the system
20 Jul 2023 17:43:45,345 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125030/ATI_Year2015_52-59_2022-01-06_12-18-04.sky.zip into the system
20 Jul 2023 17:43:45,346 INFO : Starting import from ATI_Year2015_52-59_2022-01-06_12-18-04.sky.zip
20 Jul 2023 17:43:45,348 INFO : Starting to import Skyline document from ATI_Year2015_52-59_2022-01-06_12-18-04.sky.zip
20 Jul 2023 17:43:45,350 INFO : Expanding ATI_Year2015_52-59.skyd
20 Jul 2023 17:43:45,423 INFO : Expanding ATI_Year2015_52-59.sky.view
20 Jul 2023 17:43:45,424 INFO : Expanding ATI_Year2015_52-59.sky
20 Jul 2023 17:43:45,436 INFO : 1% Done
20 Jul 2023 17:43:45,495 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:45,497 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:45,658 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:45,665 INFO : 6% Done
20 Jul 2023 17:43:45,730 INFO : 10% Done
20 Jul 2023 17:43:45,787 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:45,787 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:45,794 INFO : 15% Done
20 Jul 2023 17:43:45,866 INFO : 20% Done
20 Jul 2023 17:43:45,925 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:45,925 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:45,930 INFO : 23% Done
20 Jul 2023 17:43:45,980 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:45,980 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:45,985 INFO : 25% Done
20 Jul 2023 17:43:46,024 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:46,024 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:46,030 INFO : 29% Done
20 Jul 2023 17:43:46,094 INFO : 34% Done
20 Jul 2023 17:43:46,152 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,152 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:46,159 INFO : 39% Done
20 Jul 2023 17:43:46,231 INFO : 43% Done
20 Jul 2023 17:43:46,287 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,288 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:46,293 INFO : 48% Done
20 Jul 2023 17:43:46,356 INFO : 52% Done
20 Jul 2023 17:43:46,418 INFO : 57% Done
20 Jul 2023 17:43:46,477 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:46,477 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:46,482 INFO : 62% Done
20 Jul 2023 17:43:46,542 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:46,542 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:46,547 INFO : 64% Done
20 Jul 2023 17:43:46,588 INFO : 67% Done
20 Jul 2023 17:43:46,626 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,626 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:46,632 INFO : 71% Done
20 Jul 2023 17:43:46,691 INFO : 74% Done
20 Jul 2023 17:43:46,738 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,738 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:46,744 INFO : 77% Done
20 Jul 2023 17:43:46,766 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:46,766 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:46,771 INFO : 80% Done
20 Jul 2023 17:43:46,822 INFO : 85% Done
20 Jul 2023 17:43:46,878 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,878 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:46,882 INFO : 87% Done
20 Jul 2023 17:43:46,923 INFO : 90% Done
20 Jul 2023 17:43:46,962 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:46,962 INFO : Inserting sp|P81713|IBB3_WHEAT
20 Jul 2023 17:43:46,968 INFO : 93% Done
20 Jul 2023 17:43:46,996 INFO : 95% Done
20 Jul 2023 17:43:47,024 INFO : 98% Done
20 Jul 2023 17:43:47,047 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:47,048 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:47,049 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:47,127 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:47,186 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:47,208 INFO : Cleaning up temp tables
20 Jul 2023 17:43:47,437 INFO : Completed import of Skyline document from ATI_Year2015_52-59_2022-01-06_12-18-04.sky.zip
20 Jul 2023 17:43:47,439 INFO : 100% Done
20 Jul 2023 17:43:47,442 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125030/ATI_Year2015_52-59_2022-01-06_12-18-04.sky.zip into the system
20 Jul 2023 17:43:47,443 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125032/ATI_Year2015_60_2022-01-06_12-36-08/ATI_Year2015_60.skyd into the system
20 Jul 2023 17:43:47,443 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125032/ATI_Year2015_60_2022-01-06_12-36-08/ATI_Year2015_60.skyd into the system
20 Jul 2023 17:43:47,443 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125032/ATI_Year2015_60_2022-01-06_12-36-08.sky.zip into the system
20 Jul 2023 17:43:47,444 INFO : Starting import from ATI_Year2015_60_2022-01-06_12-36-08.sky.zip
20 Jul 2023 17:43:47,445 INFO : Starting to import Skyline document from ATI_Year2015_60_2022-01-06_12-36-08.sky.zip
20 Jul 2023 17:43:47,447 INFO : Expanding ATI_Year2015_60.skyd
20 Jul 2023 17:43:47,478 INFO : Expanding ATI_Year2015_60.sky.view
20 Jul 2023 17:43:47,478 INFO : Expanding ATI_Year2015_60.sky
20 Jul 2023 17:43:47,485 INFO : 2% Done
20 Jul 2023 17:43:47,510 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:43:47,511 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:43:47,653 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:43:47,658 INFO : 7% Done
20 Jul 2023 17:43:47,689 INFO : 13% Done
20 Jul 2023 17:43:47,716 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:47,716 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:43:47,720 INFO : 17% Done
20 Jul 2023 17:43:47,745 INFO : 22% Done
20 Jul 2023 17:43:47,771 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:47,771 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:43:47,774 INFO : 25% Done
20 Jul 2023 17:43:47,792 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:47,792 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:43:47,796 INFO : 28% Done
20 Jul 2023 17:43:47,814 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:47,814 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:43:47,817 INFO : 31% Done
20 Jul 2023 17:43:47,837 INFO : 35% Done
20 Jul 2023 17:43:47,855 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:47,855 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:43:47,859 INFO : 41% Done
20 Jul 2023 17:43:47,892 INFO : 48% Done
20 Jul 2023 17:43:47,922 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:47,922 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:43:47,926 INFO : 54% Done
20 Jul 2023 17:43:47,955 INFO : 59% Done
20 Jul 2023 17:43:47,983 INFO : 62% Done
20 Jul 2023 17:43:48,001 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:43:48,002 INFO : 63% Done
20 Jul 2023 17:43:48,002 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:43:48,006 INFO : 67% Done
20 Jul 2023 17:43:48,028 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:48,029 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:43:48,032 INFO : 71% Done
20 Jul 2023 17:43:48,053 INFO : 74% Done
20 Jul 2023 17:43:48,070 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:48,070 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:43:48,074 INFO : 77% Done
20 Jul 2023 17:43:48,098 INFO : 82% Done
20 Jul 2023 17:43:48,119 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:48,119 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:43:48,123 INFO : 85% Done
20 Jul 2023 17:43:48,134 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:43:48,134 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:43:48,137 INFO : 88% Done
20 Jul 2023 17:43:48,157 INFO : 92% Done
20 Jul 2023 17:43:48,174 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:48,174 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:43:48,177 INFO : 95% Done
20 Jul 2023 17:43:48,196 INFO : 98% Done
20 Jul 2023 17:43:48,215 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:43:48,215 INFO : Done parsing Skyline document.
20 Jul 2023 17:43:48,216 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:43:48,283 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:43:48,306 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:43:48,314 INFO : Cleaning up temp tables
20 Jul 2023 17:43:48,553 INFO : Completed import of Skyline document from ATI_Year2015_60_2022-01-06_12-36-08.sky.zip
20 Jul 2023 17:43:48,555 INFO : 100% Done
20 Jul 2023 17:43:48,558 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125032/ATI_Year2015_60_2022-01-06_12-36-08.sky.zip into the system
20 Jul 2023 17:43:48,589 INFO : Done importing xar
20 Jul 2023 17:43:48,590 INFO : Loading pages and webpart properties
20 Jul 2023 17:43:48,643 INFO : Done importing 3 page(s) with 4 webpart(s)
20 Jul 2023 17:43:48,643 INFO : Loading File Browser config
20 Jul 2023 17:43:48,643 INFO : Done importing File Browser config
20 Jul 2023 17:43:48,644 INFO : Starting Sample Status Data import
20 Jul 2023 17:43:48,644 INFO : No sample types XAR file to process.
20 Jul 2023 17:43:48,644 INFO : Finished importing Sample Status Data
20 Jul 2023 17:43:48,648 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:43:48,649 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
20 Jul 2023 17:43:48,650 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
20 Jul 2023 17:43:48,650 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
20 Jul 2023 17:43:48,650 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
20 Jul 2023 17:43:48,650 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:43:48,650 INFO : Done importing folder archive for Year 2015
20 Jul 2023 17:43:48,704 INFO : New folder created with inherited permissions: /Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2017
20 Jul 2023 17:43:48,705 INFO : Loading folder archive for Year 2017
20 Jul 2023 17:43:48,705 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2017] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2017
20 Jul 2023 17:43:48,706 INFO : Loading folder properties (folder type, settings and active modules)
20 Jul 2023 17:43:48,706 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2017] Folder type: Targeted MS
20 Jul 2023 17:43:48,706 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2017] Active modules: PanoramaPublic, Wiki, Experiment, API, Query, Announcements, Pipeline, Assay, MS2, Core, Search, FileContent, Issues, TargetedMS
20 Jul 2023 17:43:48,760 INFO : Done importing folder properties (folder type, settings and active modules)
20 Jul 2023 17:43:48,761 INFO : Loading container specific module properties
20 Jul 2023 17:43:48,765 INFO : Done importing container specific module properties
20 Jul 2023 17:43:48,766 INFO : Loading etl definitions
20 Jul 2023 17:43:48,767 INFO : Loading wikis
20 Jul 2023 17:43:48,768 INFO : 0 wikis imported
20 Jul 2023 17:43:48,768 INFO : Done importing wikis
20 Jul 2023 17:43:48,768 INFO : Starting to copy files
20 Jul 2023 17:45:31,401 INFO : Copied 281 files
20 Jul 2023 17:45:31,401 INFO : Ensuring exp.data rows exist for imported files
20 Jul 2023 17:45:32,634 INFO : Starting Sample Type and Data Class import
20 Jul 2023 17:45:32,634 INFO : No types XAR file to process.
20 Jul 2023 17:45:32,634 INFO : Finished importing Sample Types and Data Classes
20 Jul 2023 17:45:32,635 INFO : Loading xar
20 Jul 2023 17:45:33,690 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,692 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,694 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,694 DEBUG: Protocol import complete
20 Jul 2023 17:45:33,702 DEBUG: Protocol action set import complete
20 Jul 2023 17:45:33,725 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,730 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:b0f38598-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,733 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:b0f38576-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,733 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,735 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,736 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:b0f385c0-5112-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,739 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,743 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:61b0e77e-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,746 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:61b0e76f-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,746 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,747 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,748 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:61b0e799-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,751 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,754 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:61b0ea5f-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,757 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:61b0ea50-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,757 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,759 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,759 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:61b0ea96-5113-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,762 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,766 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:8992ce1a-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,768 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:8992ce08-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,768 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,770 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,770 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:8992ce72-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,773 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,776 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:8992d356-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,779 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:8992d322-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,779 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,780 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,781 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:8992d385-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,784 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,787 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:8992d8d3-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,790 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:8992d8b7-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,790 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,791 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,791 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:8992d909-5115-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,794 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,798 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:1a7c0d66-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,801 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:1a7c0d57-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,801 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,802 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,802 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:1a7c0d89-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,805 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip'
20 Jul 2023 17:45:33,809 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11900:1a7c127e-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,811 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11900:1a7c126f-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,811 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:45:33,813 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11900:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:45:33,813 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11900:1a7c129f-511b-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:45:33,814 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125033/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc.skyd into the system
20 Jul 2023 17:45:33,814 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125033/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc.skyd into the system
20 Jul 2023 17:45:33,815 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125033/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03.sky.zip into the system
20 Jul 2023 17:45:33,822 INFO : Starting import from ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03.sky.zip
20 Jul 2023 17:45:33,828 INFO : Starting to import Skyline document from ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03.sky.zip
20 Jul 2023 17:45:33,831 INFO : Expanding ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc.skyd
20 Jul 2023 17:45:33,915 INFO : Expanding ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc.sky.view
20 Jul 2023 17:45:33,916 INFO : Expanding ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc.sky
20 Jul 2023 17:45:33,931 INFO : 1% Done
20 Jul 2023 17:45:34,001 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:34,003 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:34,203 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:34,213 INFO : 6% Done
20 Jul 2023 17:45:34,303 INFO : 11% Done
20 Jul 2023 17:45:34,376 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:34,376 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:34,384 INFO : 16% Done
20 Jul 2023 17:45:34,460 INFO : 21% Done
20 Jul 2023 17:45:34,535 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:34,535 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:34,541 INFO : 24% Done
20 Jul 2023 17:45:34,597 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:34,597 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:34,603 INFO : 27% Done
20 Jul 2023 17:45:34,662 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:34,662 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:34,669 INFO : 33% Done
20 Jul 2023 17:45:34,742 INFO : 37% Done
20 Jul 2023 17:45:34,800 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:34,800 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:34,807 INFO : 42% Done
20 Jul 2023 17:45:34,880 INFO : 47% Done
20 Jul 2023 17:45:34,949 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:34,949 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:34,956 INFO : 51% Done
20 Jul 2023 17:45:35,023 INFO : 56% Done
20 Jul 2023 17:45:35,098 INFO : 61% Done
20 Jul 2023 17:45:35,166 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:35,166 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:35,172 INFO : 66% Done
20 Jul 2023 17:45:35,235 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:35,235 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:35,240 INFO : 68% Done
20 Jul 2023 17:45:35,284 INFO : 72% Done
20 Jul 2023 17:45:35,346 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:35,346 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:35,352 INFO : 75% Done
20 Jul 2023 17:45:35,417 INFO : 80% Done
20 Jul 2023 17:45:35,485 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:35,485 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:35,490 INFO : 82% Done
20 Jul 2023 17:45:35,510 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:35,510 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:35,516 INFO : 87% Done
20 Jul 2023 17:45:35,579 INFO : 91% Done
20 Jul 2023 17:45:35,638 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:35,638 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:35,643 INFO : 95% Done
20 Jul 2023 17:45:35,706 INFO : 98% Done
20 Jul 2023 17:45:35,755 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:35,756 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:35,757 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:35,849 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:35,909 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:35,929 INFO : Cleaning up temp tables
20 Jul 2023 17:45:36,219 INFO : Completed import of Skyline document from ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03.sky.zip
20 Jul 2023 17:45:36,221 INFO : 100% Done
20 Jul 2023 17:45:36,226 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125033/ATI_Year2017_01_04_07_10-12_15_17_21_23-24_26_bc_2022-01-06_12-38-03.sky.zip into the system
20 Jul 2023 17:45:36,226 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125034/ATI_Year2017_01-24_a_2022-01-06_12-40-02/ATI_Year2017_01-24_a.skyd into the system
20 Jul 2023 17:45:36,227 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125034/ATI_Year2017_01-24_a_2022-01-06_12-40-02/ATI_Year2017_01-24_a.skyd into the system
20 Jul 2023 17:45:36,227 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125034/ATI_Year2017_01-24_a_2022-01-06_12-40-02.sky.zip into the system
20 Jul 2023 17:45:36,230 INFO : Starting import from ATI_Year2017_01-24_a_2022-01-06_12-40-02.sky.zip
20 Jul 2023 17:45:36,232 INFO : Starting to import Skyline document from ATI_Year2017_01-24_a_2022-01-06_12-40-02.sky.zip
20 Jul 2023 17:45:36,235 INFO : Expanding ATI_Year2017_01-24_a.skyd
20 Jul 2023 17:45:36,309 INFO : Expanding ATI_Year2017_01-24_a.sky.view
20 Jul 2023 17:45:36,310 INFO : Expanding ATI_Year2017_01-24_a.sky
20 Jul 2023 17:45:36,322 INFO : 1% Done
20 Jul 2023 17:45:36,385 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:36,387 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:36,541 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:36,549 INFO : 6% Done
20 Jul 2023 17:45:36,633 INFO : 11% Done
20 Jul 2023 17:45:36,702 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:36,702 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:36,709 INFO : 16% Done
20 Jul 2023 17:45:36,782 INFO : 21% Done
20 Jul 2023 17:45:36,849 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:36,849 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:36,855 INFO : 24% Done
20 Jul 2023 17:45:36,904 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:36,904 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:36,911 INFO : 28% Done
20 Jul 2023 17:45:36,980 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:36,980 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:36,987 INFO : 33% Done
20 Jul 2023 17:45:37,060 INFO : 37% Done
20 Jul 2023 17:45:37,119 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:37,119 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:37,126 INFO : 42% Done
20 Jul 2023 17:45:37,198 INFO : 47% Done
20 Jul 2023 17:45:37,266 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:37,266 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:37,272 INFO : 51% Done
20 Jul 2023 17:45:37,336 INFO : 56% Done
20 Jul 2023 17:45:37,410 INFO : 61% Done
20 Jul 2023 17:45:37,479 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:37,479 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:37,485 INFO : 65% Done
20 Jul 2023 17:45:37,547 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:37,547 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:37,552 INFO : 68% Done
20 Jul 2023 17:45:37,596 INFO : 71% Done
20 Jul 2023 17:45:37,646 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:37,646 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:37,653 INFO : 74% Done
20 Jul 2023 17:45:37,718 INFO : 79% Done
20 Jul 2023 17:45:37,786 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:37,786 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:37,791 INFO : 82% Done
20 Jul 2023 17:45:37,813 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:37,813 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:37,819 INFO : 85% Done
20 Jul 2023 17:45:37,872 INFO : 90% Done
20 Jul 2023 17:45:37,940 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:37,940 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:37,946 INFO : 95% Done
20 Jul 2023 17:45:38,017 INFO : 98% Done
20 Jul 2023 17:45:38,066 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:38,068 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:38,069 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:38,146 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:38,200 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:38,219 INFO : Cleaning up temp tables
20 Jul 2023 17:45:38,468 INFO : Completed import of Skyline document from ATI_Year2017_01-24_a_2022-01-06_12-40-02.sky.zip
20 Jul 2023 17:45:38,470 INFO : 100% Done
20 Jul 2023 17:45:38,476 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125034/ATI_Year2017_01-24_a_2022-01-06_12-40-02.sky.zip into the system
20 Jul 2023 17:45:38,476 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125035/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a.skyd into the system
20 Jul 2023 17:45:38,476 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125035/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a.skyd into the system
20 Jul 2023 17:45:38,476 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125035/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37.sky.zip into the system
20 Jul 2023 17:45:38,478 INFO : Starting import from ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37.sky.zip
20 Jul 2023 17:45:38,480 INFO : Starting to import Skyline document from ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37.sky.zip
20 Jul 2023 17:45:38,483 INFO : Expanding ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a.skyd
20 Jul 2023 17:45:38,556 INFO : Expanding ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a.sky.view
20 Jul 2023 17:45:38,556 INFO : Expanding ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a.sky
20 Jul 2023 17:45:38,568 INFO : 1% Done
20 Jul 2023 17:45:38,635 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:38,637 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:38,782 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:38,789 INFO : 6% Done
20 Jul 2023 17:45:38,861 INFO : 10% Done
20 Jul 2023 17:45:38,927 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:38,927 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:38,933 INFO : 15% Done
20 Jul 2023 17:45:39,004 INFO : 19% Done
20 Jul 2023 17:45:39,070 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:39,070 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:39,077 INFO : 24% Done
20 Jul 2023 17:45:39,143 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:39,143 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:39,150 INFO : 27% Done
20 Jul 2023 17:45:39,216 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:39,216 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:39,222 INFO : 32% Done
20 Jul 2023 17:45:39,292 INFO : 36% Done
20 Jul 2023 17:45:39,358 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:39,358 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:39,364 INFO : 41% Done
20 Jul 2023 17:45:39,434 INFO : 45% Done
20 Jul 2023 17:45:39,500 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:39,500 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:39,506 INFO : 49% Done
20 Jul 2023 17:45:39,567 INFO : 53% Done
20 Jul 2023 17:45:39,637 INFO : 58% Done
20 Jul 2023 17:45:39,703 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:39,703 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:39,708 INFO : 62% Done
20 Jul 2023 17:45:39,768 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:39,768 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:39,775 INFO : 66% Done
20 Jul 2023 17:45:39,845 INFO : 70% Done
20 Jul 2023 17:45:39,910 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:39,910 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:39,916 INFO : 74% Done
20 Jul 2023 17:45:39,986 INFO : 79% Done
20 Jul 2023 17:45:40,053 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:40,053 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:40,058 INFO : 81% Done
20 Jul 2023 17:45:40,080 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:40,080 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:40,086 INFO : 85% Done
20 Jul 2023 17:45:40,156 INFO : 90% Done
20 Jul 2023 17:45:40,221 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:40,221 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:40,226 INFO : 94% Done
20 Jul 2023 17:45:40,290 INFO : 98% Done
20 Jul 2023 17:45:40,359 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:40,361 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:40,361 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:40,439 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:40,490 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:40,509 INFO : Cleaning up temp tables
20 Jul 2023 17:45:40,727 INFO : Completed import of Skyline document from ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37.sky.zip
20 Jul 2023 17:45:40,729 INFO : 100% Done
20 Jul 2023 17:45:40,733 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125035/ATI_Year2017_02-06_08-09_13-14_16_bc_25-30_a_2022-01-06_12-41-37.sky.zip into the system
20 Jul 2023 17:45:40,733 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125037/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a.skyd into the system
20 Jul 2023 17:45:40,733 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125037/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a.skyd into the system
20 Jul 2023 17:45:40,733 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125037/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16.sky.zip into the system
20 Jul 2023 17:45:40,735 INFO : Starting import from ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16.sky.zip
20 Jul 2023 17:45:40,737 INFO : Starting to import Skyline document from ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16.sky.zip
20 Jul 2023 17:45:40,740 INFO : Expanding ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a.skyd
20 Jul 2023 17:45:40,814 INFO : Expanding ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a.sky.view
20 Jul 2023 17:45:40,814 INFO : Expanding ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a.sky
20 Jul 2023 17:45:40,825 INFO : 1% Done
20 Jul 2023 17:45:40,885 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:40,887 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:41,033 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:41,040 INFO : 6% Done
20 Jul 2023 17:45:41,112 INFO : 11% Done
20 Jul 2023 17:45:41,178 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:41,178 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:41,184 INFO : 16% Done
20 Jul 2023 17:45:41,256 INFO : 21% Done
20 Jul 2023 17:45:41,323 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:41,323 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:41,329 INFO : 25% Done
20 Jul 2023 17:45:41,376 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:41,377 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:41,383 INFO : 29% Done
20 Jul 2023 17:45:41,448 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:41,448 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:41,452 INFO : 31% Done
20 Jul 2023 17:45:41,496 INFO : 35% Done
20 Jul 2023 17:45:41,553 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:41,553 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:41,560 INFO : 40% Done
20 Jul 2023 17:45:41,631 INFO : 46% Done
20 Jul 2023 17:45:41,697 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:41,697 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:41,704 INFO : 50% Done
20 Jul 2023 17:45:41,768 INFO : 55% Done
20 Jul 2023 17:45:41,840 INFO : 60% Done
20 Jul 2023 17:45:41,908 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:41,908 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:41,914 INFO : 65% Done
20 Jul 2023 17:45:41,974 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:41,974 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:41,979 INFO : 67% Done
20 Jul 2023 17:45:42,022 INFO : 71% Done
20 Jul 2023 17:45:42,071 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:42,071 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:42,077 INFO : 75% Done
20 Jul 2023 17:45:42,146 INFO : 79% Done
20 Jul 2023 17:45:42,203 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:42,203 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:42,208 INFO : 81% Done
20 Jul 2023 17:45:42,232 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:42,233 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:42,238 INFO : 85% Done
20 Jul 2023 17:45:42,295 INFO : 90% Done
20 Jul 2023 17:45:42,366 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:42,366 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:42,373 INFO : 95% Done
20 Jul 2023 17:45:42,448 INFO : 98% Done
20 Jul 2023 17:45:42,503 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:42,505 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:42,505 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:42,591 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:42,647 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:42,667 INFO : Cleaning up temp tables
20 Jul 2023 17:45:42,909 INFO : Completed import of Skyline document from ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16.sky.zip
20 Jul 2023 17:45:42,911 INFO : 100% Done
20 Jul 2023 17:45:42,915 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125037/ATI_Year2017_18-20_22_25_27_29-30_bc_31-38_a_2022-01-06_12-56-16.sky.zip into the system
20 Jul 2023 17:45:42,915 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125038/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a.skyd into the system
20 Jul 2023 17:45:42,915 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125038/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a.skyd into the system
20 Jul 2023 17:45:42,915 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125038/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56.sky.zip into the system
20 Jul 2023 17:45:42,918 INFO : Starting import from ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56.sky.zip
20 Jul 2023 17:45:42,920 INFO : Starting to import Skyline document from ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56.sky.zip
20 Jul 2023 17:45:42,923 INFO : Expanding ATI_Year2017_28_31_33-35_37-38_bc_39-48_a.skyd
20 Jul 2023 17:45:43,005 INFO : Expanding ATI_Year2017_28_31_33-35_37-38_bc_39-48_a.sky.view
20 Jul 2023 17:45:43,006 INFO : Expanding ATI_Year2017_28_31_33-35_37-38_bc_39-48_a.sky
20 Jul 2023 17:45:43,019 INFO : 1% Done
20 Jul 2023 17:45:43,093 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:43,096 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:43,247 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:43,254 INFO : 5% Done
20 Jul 2023 17:45:43,331 INFO : 10% Done
20 Jul 2023 17:45:43,403 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:43,403 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:43,410 INFO : 14% Done
20 Jul 2023 17:45:43,485 INFO : 18% Done
20 Jul 2023 17:45:43,555 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:43,555 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:43,562 INFO : 22% Done
20 Jul 2023 17:45:43,629 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:43,629 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:43,636 INFO : 26% Done
20 Jul 2023 17:45:43,703 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:43,703 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:43,712 INFO : 34% Done
20 Jul 2023 17:45:43,843 INFO : 38% Done
20 Jul 2023 17:45:43,910 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:43,910 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:43,917 INFO : 42% Done
20 Jul 2023 17:45:43,989 INFO : 47% Done
20 Jul 2023 17:45:44,057 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:44,058 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:44,064 INFO : 51% Done
20 Jul 2023 17:45:44,129 INFO : 55% Done
20 Jul 2023 17:45:44,200 INFO : 59% Done
20 Jul 2023 17:45:44,268 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:44,268 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:44,274 INFO : 63% Done
20 Jul 2023 17:45:44,334 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:44,334 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:44,340 INFO : 67% Done
20 Jul 2023 17:45:44,412 INFO : 71% Done
20 Jul 2023 17:45:44,478 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:44,478 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:44,484 INFO : 75% Done
20 Jul 2023 17:45:44,556 INFO : 79% Done
20 Jul 2023 17:45:44,622 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:44,622 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:44,627 INFO : 81% Done
20 Jul 2023 17:45:44,649 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:44,649 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:44,655 INFO : 85% Done
20 Jul 2023 17:45:44,725 INFO : 90% Done
20 Jul 2023 17:45:44,792 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:44,792 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:44,797 INFO : 94% Done
20 Jul 2023 17:45:44,868 INFO : 98% Done
20 Jul 2023 17:45:44,936 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:44,938 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:44,938 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:45,017 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:45,072 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:45,092 INFO : Cleaning up temp tables
20 Jul 2023 17:45:45,313 INFO : Completed import of Skyline document from ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56.sky.zip
20 Jul 2023 17:45:45,316 INFO : 100% Done
20 Jul 2023 17:45:45,319 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125038/ATI_Year2017_28_31_33-35_37-38_bc_39-48_a_2022-01-06_12-57-56.sky.zip into the system
20 Jul 2023 17:45:45,319 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125039/ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34/ATI_Year2017_32_36_45-54_bc.skyd into the system
20 Jul 2023 17:45:45,320 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125039/ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34/ATI_Year2017_32_36_45-54_bc.skyd into the system
20 Jul 2023 17:45:45,320 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125039/ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34.sky.zip into the system
20 Jul 2023 17:45:45,322 INFO : Starting import from ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34.sky.zip
20 Jul 2023 17:45:45,324 INFO : Starting to import Skyline document from ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34.sky.zip
20 Jul 2023 17:45:45,327 INFO : Expanding ATI_Year2017_32_36_45-54_bc.skyd
20 Jul 2023 17:45:45,401 INFO : Expanding ATI_Year2017_32_36_45-54_bc.sky.view
20 Jul 2023 17:45:45,401 INFO : Expanding ATI_Year2017_32_36_45-54_bc.sky
20 Jul 2023 17:45:45,414 INFO : 1% Done
20 Jul 2023 17:45:45,476 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:45,478 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:45,628 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:45,635 INFO : 5% Done
20 Jul 2023 17:45:45,708 INFO : 10% Done
20 Jul 2023 17:45:45,774 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:45,774 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:45,780 INFO : 14% Done
20 Jul 2023 17:45:45,849 INFO : 19% Done
20 Jul 2023 17:45:45,914 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:45,914 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:45,920 INFO : 23% Done
20 Jul 2023 17:45:45,986 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:45,986 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:45,992 INFO : 27% Done
20 Jul 2023 17:45:46,061 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:46,061 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:46,067 INFO : 31% Done
20 Jul 2023 17:45:46,136 INFO : 35% Done
20 Jul 2023 17:45:46,203 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:46,204 INFO : 36% Done
20 Jul 2023 17:45:46,204 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:46,210 INFO : 40% Done
20 Jul 2023 17:45:46,279 INFO : 44% Done
20 Jul 2023 17:45:46,344 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:46,344 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:46,350 INFO : 48% Done
20 Jul 2023 17:45:46,416 INFO : 53% Done
20 Jul 2023 17:45:46,487 INFO : 57% Done
20 Jul 2023 17:45:46,554 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:46,554 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:46,560 INFO : 61% Done
20 Jul 2023 17:45:46,619 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:46,619 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:46,625 INFO : 66% Done
20 Jul 2023 17:45:46,694 INFO : 70% Done
20 Jul 2023 17:45:46,759 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:46,759 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:46,765 INFO : 74% Done
20 Jul 2023 17:45:46,834 INFO : 78% Done
20 Jul 2023 17:45:46,900 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:46,900 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:46,905 INFO : 81% Done
20 Jul 2023 17:45:46,928 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:46,928 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:46,934 INFO : 85% Done
20 Jul 2023 17:45:47,004 INFO : 89% Done
20 Jul 2023 17:45:47,069 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:47,069 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:47,075 INFO : 94% Done
20 Jul 2023 17:45:47,144 INFO : 98% Done
20 Jul 2023 17:45:47,209 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:47,211 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:47,211 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:47,288 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:47,339 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:47,359 INFO : Cleaning up temp tables
20 Jul 2023 17:45:47,578 INFO : Completed import of Skyline document from ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34.sky.zip
20 Jul 2023 17:45:47,580 INFO : 100% Done
20 Jul 2023 17:45:47,583 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125039/ATI_Year2017_32_36_45-54_bc_2022-01-06_12-59-34.sky.zip into the system
20 Jul 2023 17:45:47,583 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125041/ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44/ATI_Year2017_39-44_bc_49-60_a.skyd into the system
20 Jul 2023 17:45:47,583 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125041/ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44/ATI_Year2017_39-44_bc_49-60_a.skyd into the system
20 Jul 2023 17:45:47,584 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125041/ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44.sky.zip into the system
20 Jul 2023 17:45:47,586 INFO : Starting import from ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44.sky.zip
20 Jul 2023 17:45:47,587 INFO : Starting to import Skyline document from ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44.sky.zip
20 Jul 2023 17:45:47,590 INFO : Expanding ATI_Year2017_39-44_bc_49-60_a.skyd
20 Jul 2023 17:45:47,664 INFO : Expanding ATI_Year2017_39-44_bc_49-60_a.sky.view
20 Jul 2023 17:45:47,664 INFO : Expanding ATI_Year2017_39-44_bc_49-60_a.sky
20 Jul 2023 17:45:47,676 INFO : 1% Done
20 Jul 2023 17:45:47,746 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:47,748 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:47,898 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:47,905 INFO : 6% Done
20 Jul 2023 17:45:47,978 INFO : 10% Done
20 Jul 2023 17:45:48,043 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:48,044 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:48,050 INFO : 14% Done
20 Jul 2023 17:45:48,120 INFO : 19% Done
20 Jul 2023 17:45:48,185 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:48,185 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:48,192 INFO : 23% Done
20 Jul 2023 17:45:48,256 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:48,256 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:48,262 INFO : 27% Done
20 Jul 2023 17:45:48,327 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:48,327 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:48,333 INFO : 31% Done
20 Jul 2023 17:45:48,405 INFO : 36% Done
20 Jul 2023 17:45:48,470 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:48,470 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:48,476 INFO : 40% Done
20 Jul 2023 17:45:48,547 INFO : 45% Done
20 Jul 2023 17:45:48,612 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:48,612 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:48,618 INFO : 49% Done
20 Jul 2023 17:45:48,681 INFO : 53% Done
20 Jul 2023 17:45:48,750 INFO : 58% Done
20 Jul 2023 17:45:48,816 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:48,816 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:48,822 INFO : 62% Done
20 Jul 2023 17:45:48,881 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:48,881 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:48,888 INFO : 66% Done
20 Jul 2023 17:45:48,957 INFO : 71% Done
20 Jul 2023 17:45:49,024 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:49,024 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:49,031 INFO : 74% Done
20 Jul 2023 17:45:49,101 INFO : 79% Done
20 Jul 2023 17:45:49,166 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:49,166 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:49,171 INFO : 81% Done
20 Jul 2023 17:45:49,192 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:49,192 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:49,198 INFO : 86% Done
20 Jul 2023 17:45:49,267 INFO : 90% Done
20 Jul 2023 17:45:49,339 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:49,339 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:49,345 INFO : 94% Done
20 Jul 2023 17:45:49,409 INFO : 98% Done
20 Jul 2023 17:45:49,477 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:49,479 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:49,479 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:49,559 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:49,613 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:49,631 INFO : Cleaning up temp tables
20 Jul 2023 17:45:49,887 INFO : Completed import of Skyline document from ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44.sky.zip
20 Jul 2023 17:45:49,890 INFO : 100% Done
20 Jul 2023 17:45:49,894 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125041/ATI_Year2017_39-44_bc_49-60_a_2022-01-06_13-39-44.sky.zip into the system
20 Jul 2023 17:45:49,894 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125042/ATI_Year2017_55-60_bc_2022-01-06_13-41-48/ATI_Year2017_55-60_bc.skyd into the system
20 Jul 2023 17:45:49,894 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125042/ATI_Year2017_55-60_bc_2022-01-06_13-41-48/ATI_Year2017_55-60_bc.skyd into the system
20 Jul 2023 17:45:49,894 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125042/ATI_Year2017_55-60_bc_2022-01-06_13-41-48.sky.zip into the system
20 Jul 2023 17:45:49,896 INFO : Starting import from ATI_Year2017_55-60_bc_2022-01-06_13-41-48.sky.zip
20 Jul 2023 17:45:49,898 INFO : Starting to import Skyline document from ATI_Year2017_55-60_bc_2022-01-06_13-41-48.sky.zip
20 Jul 2023 17:45:49,900 INFO : Expanding ATI_Year2017_55-60_bc.skyd
20 Jul 2023 17:45:49,945 INFO : Expanding ATI_Year2017_55-60_bc.sky.view
20 Jul 2023 17:45:49,945 INFO : Expanding ATI_Year2017_55-60_bc.sky
20 Jul 2023 17:45:49,954 INFO : 1% Done
20 Jul 2023 17:45:49,993 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:45:49,995 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:45:50,145 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:45:50,151 INFO : 6% Done
20 Jul 2023 17:45:50,202 INFO : 10% Done
20 Jul 2023 17:45:50,246 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:50,246 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:45:50,252 INFO : 15% Done
20 Jul 2023 17:45:50,299 INFO : 20% Done
20 Jul 2023 17:45:50,344 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:50,344 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:45:50,349 INFO : 24% Done
20 Jul 2023 17:45:50,393 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:50,393 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:45:50,399 INFO : 28% Done
20 Jul 2023 17:45:50,443 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:50,443 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:45:50,448 INFO : 33% Done
20 Jul 2023 17:45:50,497 INFO : 36% Done
20 Jul 2023 17:45:50,535 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:50,536 INFO : 37% Done
20 Jul 2023 17:45:50,536 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:45:50,543 INFO : 41% Done
20 Jul 2023 17:45:50,590 INFO : 46% Done
20 Jul 2023 17:45:50,634 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:50,634 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:45:50,640 INFO : 50% Done
20 Jul 2023 17:45:50,682 INFO : 55% Done
20 Jul 2023 17:45:50,729 INFO : 59% Done
20 Jul 2023 17:45:50,774 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:45:50,774 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:45:50,779 INFO : 64% Done
20 Jul 2023 17:45:50,818 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:50,818 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:45:50,823 INFO : 68% Done
20 Jul 2023 17:45:50,870 INFO : 72% Done
20 Jul 2023 17:45:50,909 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:50,909 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:45:50,914 INFO : 76% Done
20 Jul 2023 17:45:50,961 INFO : 80% Done
20 Jul 2023 17:45:51,004 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:51,005 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:45:51,009 INFO : 83% Done
20 Jul 2023 17:45:51,024 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:45:51,024 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:45:51,029 INFO : 87% Done
20 Jul 2023 17:45:51,076 INFO : 92% Done
20 Jul 2023 17:45:51,123 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:51,123 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:45:51,127 INFO : 96% Done
20 Jul 2023 17:45:51,168 INFO : 98% Done
20 Jul 2023 17:45:51,195 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:45:51,196 INFO : Done parsing Skyline document.
20 Jul 2023 17:45:51,197 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:45:51,273 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:45:51,305 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:45:51,317 INFO : Cleaning up temp tables
20 Jul 2023 17:45:51,548 INFO : Completed import of Skyline document from ATI_Year2017_55-60_bc_2022-01-06_13-41-48.sky.zip
20 Jul 2023 17:45:51,550 INFO : 100% Done
20 Jul 2023 17:45:51,554 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202017/xar/experiments_and_runs.xar.exploded/Run125042/ATI_Year2017_55-60_bc_2022-01-06_13-41-48.sky.zip into the system
20 Jul 2023 17:45:51,581 INFO : Done importing xar
20 Jul 2023 17:45:51,582 INFO : Loading pages and webpart properties
20 Jul 2023 17:45:51,634 INFO : Done importing 3 page(s) with 4 webpart(s)
20 Jul 2023 17:45:51,634 INFO : Loading File Browser config
20 Jul 2023 17:45:51,634 INFO : Done importing File Browser config
20 Jul 2023 17:45:51,635 INFO : Starting Sample Status Data import
20 Jul 2023 17:45:51,635 INFO : No sample types XAR file to process.
20 Jul 2023 17:45:51,635 INFO : Finished importing Sample Status Data
20 Jul 2023 17:45:51,639 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:45:51,641 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
20 Jul 2023 17:45:51,641 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
20 Jul 2023 17:45:51,641 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
20 Jul 2023 17:45:51,642 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
20 Jul 2023 17:45:51,642 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:45:51,642 INFO : Done importing folder archive for Year 2017
20 Jul 2023 17:45:51,691 INFO : New folder created with inherited permissions: /Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2019
20 Jul 2023 17:45:51,691 INFO : Loading folder archive for Year 2019
20 Jul 2023 17:45:51,691 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2019] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2019
20 Jul 2023 17:45:51,692 INFO : Loading folder properties (folder type, settings and active modules)
20 Jul 2023 17:45:51,692 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2019] Folder type: Targeted MS
20 Jul 2023 17:45:51,692 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2019] Active modules: PanoramaPublic, Wiki, Experiment, API, Query, Announcements, Pipeline, Assay, MS2, Core, Search, FileContent, Issues, TargetedMS
20 Jul 2023 17:45:51,744 INFO : Done importing folder properties (folder type, settings and active modules)
20 Jul 2023 17:45:51,745 INFO : Loading container specific module properties
20 Jul 2023 17:45:51,748 INFO : Done importing container specific module properties
20 Jul 2023 17:45:51,749 INFO : Loading etl definitions
20 Jul 2023 17:45:51,750 INFO : Loading wikis
20 Jul 2023 17:45:51,751 INFO : 0 wikis imported
20 Jul 2023 17:45:51,751 INFO : Done importing wikis
20 Jul 2023 17:45:51,751 INFO : Starting to copy files
20 Jul 2023 17:47:40,183 INFO : Copied 276 files
20 Jul 2023 17:47:40,183 INFO : Ensuring exp.data rows exist for imported files
20 Jul 2023 17:47:41,255 INFO : Starting Sample Type and Data Class import
20 Jul 2023 17:47:41,255 INFO : No types XAR file to process.
20 Jul 2023 17:47:41,256 INFO : Finished importing Sample Types and Data Classes
20 Jul 2023 17:47:41,257 INFO : Loading xar
20 Jul 2023 17:47:42,387 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,389 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,391 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,391 DEBUG: Protocol import complete
20 Jul 2023 17:47:42,398 DEBUG: Protocol action set import complete
20 Jul 2023 17:47:42,416 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,421 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:7f1596a1-511c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,424 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:7f159692-511c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,424 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,426 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,426 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:7f1596d0-511c-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,429 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,432 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:e0d70f62-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,435 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:e0d70f53-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,435 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,439 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,440 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:e0d70f83-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,444 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,449 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:e0d7142f-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,452 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:e0d7141a-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,452 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,453 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,454 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:e0d71449-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,457 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,460 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:e0d72b6b-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,462 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:e0d72b5b-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,462 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,464 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,464 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:e0d72b8a-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,467 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,470 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:e0d72f7c-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,473 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:e0d72f6d-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,473 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,474 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,475 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:e0d72f9c-511d-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,478 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,481 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:deaf2369-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,484 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:deaf234e-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,484 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,485 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,486 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:deaf2383-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,488 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,492 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:deaf274b-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,494 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:deaf273b-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,494 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,496 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,496 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:deaf2775-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,499 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip'
20 Jul 2023 17:47:42,503 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-11901:deaf324c-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,505 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-11901:deaf3234-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,505 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Core'
20 Jul 2023 17:47:42,507 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-11901:TargetedMS.ImportSkyZip.Output'
20 Jul 2023 17:47:42,507 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-11901:deaf3270-511f-103a-93e1-fea6ddf5fdda'
20 Jul 2023 17:47:42,508 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125044/ATI_Year2019_01-08_2022-01-06_13-45-45/ATI_Year2019_01-08.skyd into the system
20 Jul 2023 17:47:42,509 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125044/ATI_Year2019_01-08_2022-01-06_13-45-45/ATI_Year2019_01-08.skyd into the system
20 Jul 2023 17:47:42,509 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125044/ATI_Year2019_01-08_2022-01-06_13-45-45.sky.zip into the system
20 Jul 2023 17:47:42,510 INFO : Starting import from ATI_Year2019_01-08_2022-01-06_13-45-45.sky.zip
20 Jul 2023 17:47:42,513 INFO : Starting to import Skyline document from ATI_Year2019_01-08_2022-01-06_13-45-45.sky.zip
20 Jul 2023 17:47:42,516 INFO : Expanding ATI_Year2019_01-08.skyd
20 Jul 2023 17:47:42,595 INFO : Expanding ATI_Year2019_01-08.sky.view
20 Jul 2023 17:47:42,596 INFO : Expanding ATI_Year2019_01-08.sky
20 Jul 2023 17:47:42,607 INFO : 2% Done
20 Jul 2023 17:47:42,670 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:42,673 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:42,831 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:42,837 INFO : 5% Done
20 Jul 2023 17:47:42,887 INFO : 9% Done
20 Jul 2023 17:47:42,927 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:42,927 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:42,932 INFO : 14% Done
20 Jul 2023 17:47:42,984 INFO : 18% Done
20 Jul 2023 17:47:43,033 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,035 INFO : 19% Done
20 Jul 2023 17:47:43,035 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:43,040 INFO : 22% Done
20 Jul 2023 17:47:43,085 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:43,085 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:43,090 INFO : 25% Done
20 Jul 2023 17:47:43,131 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:43,131 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:43,137 INFO : 29% Done
20 Jul 2023 17:47:43,193 INFO : 33% Done
20 Jul 2023 17:47:43,250 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,250 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:43,257 INFO : 40% Done
20 Jul 2023 17:47:43,333 INFO : 45% Done
20 Jul 2023 17:47:43,384 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,384 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:43,390 INFO : 49% Done
20 Jul 2023 17:47:43,448 INFO : 55% Done
20 Jul 2023 17:47:43,515 INFO : 60% Done
20 Jul 2023 17:47:43,566 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:43,567 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:43,573 INFO : 65% Done
20 Jul 2023 17:47:43,625 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:43,625 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:43,630 INFO : 68% Done
20 Jul 2023 17:47:43,673 INFO : 72% Done
20 Jul 2023 17:47:43,714 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,714 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:43,719 INFO : 74% Done
20 Jul 2023 17:47:43,764 INFO : 79% Done
20 Jul 2023 17:47:43,815 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,815 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:43,820 INFO : 83% Done
20 Jul 2023 17:47:43,844 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:43,844 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:43,850 INFO : 87% Done
20 Jul 2023 17:47:43,907 INFO : 91% Done
20 Jul 2023 17:47:43,949 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:43,949 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:43,953 INFO : 95% Done
20 Jul 2023 17:47:43,999 INFO : 98% Done
20 Jul 2023 17:47:44,040 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:44,042 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:44,043 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:44,133 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:44,191 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:44,212 INFO : Cleaning up temp tables
20 Jul 2023 17:47:44,526 INFO : Completed import of Skyline document from ATI_Year2019_01-08_2022-01-06_13-45-45.sky.zip
20 Jul 2023 17:47:44,528 INFO : 100% Done
20 Jul 2023 17:47:44,532 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125044/ATI_Year2019_01-08_2022-01-06_13-45-45.sky.zip into the system
20 Jul 2023 17:47:44,532 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125045/ATI_Year2019_09-16_2022-01-06_13-55-21/ATI_Year2019_09-16.skyd into the system
20 Jul 2023 17:47:44,533 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125045/ATI_Year2019_09-16_2022-01-06_13-55-21/ATI_Year2019_09-16.skyd into the system
20 Jul 2023 17:47:44,533 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125045/ATI_Year2019_09-16_2022-01-06_13-55-21.sky.zip into the system
20 Jul 2023 17:47:44,534 INFO : Starting import from ATI_Year2019_09-16_2022-01-06_13-55-21.sky.zip
20 Jul 2023 17:47:44,536 INFO : Starting to import Skyline document from ATI_Year2019_09-16_2022-01-06_13-55-21.sky.zip
20 Jul 2023 17:47:44,540 INFO : Expanding ATI_Year2019_09-16.skyd
20 Jul 2023 17:47:44,616 INFO : Expanding ATI_Year2019_09-16.sky.view
20 Jul 2023 17:47:44,616 INFO : Expanding ATI_Year2019_09-16.sky
20 Jul 2023 17:47:44,626 INFO : 2% Done
20 Jul 2023 17:47:44,687 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:44,689 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:44,844 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:44,850 INFO : 7% Done
20 Jul 2023 17:47:44,910 INFO : 12% Done
20 Jul 2023 17:47:44,973 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:44,973 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:44,982 INFO : 17% Done
20 Jul 2023 17:47:45,044 INFO : 22% Done
20 Jul 2023 17:47:45,102 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:45,102 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:45,109 INFO : 25% Done
20 Jul 2023 17:47:45,164 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:45,164 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:45,172 INFO : 29% Done
20 Jul 2023 17:47:45,222 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:45,222 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:45,229 INFO : 34% Done
20 Jul 2023 17:47:45,289 INFO : 38% Done
20 Jul 2023 17:47:45,342 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:45,343 INFO : 39% Done
20 Jul 2023 17:47:45,344 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:45,350 INFO : 43% Done
20 Jul 2023 17:47:45,412 INFO : 48% Done
20 Jul 2023 17:47:45,465 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:45,466 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:45,473 INFO : 53% Done
20 Jul 2023 17:47:45,533 INFO : 58% Done
20 Jul 2023 17:47:45,594 INFO : 61% Done
20 Jul 2023 17:47:45,637 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:45,638 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:45,644 INFO : 66% Done
20 Jul 2023 17:47:45,697 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:45,697 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:45,702 INFO : 69% Done
20 Jul 2023 17:47:45,747 INFO : 73% Done
20 Jul 2023 17:47:45,789 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:45,789 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:45,795 INFO : 76% Done
20 Jul 2023 17:47:45,842 INFO : 79% Done
20 Jul 2023 17:47:45,885 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:45,885 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:45,891 INFO : 83% Done
20 Jul 2023 17:47:45,916 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:45,916 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:45,922 INFO : 88% Done
20 Jul 2023 17:47:45,977 INFO : 91% Done
20 Jul 2023 17:47:46,018 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:46,018 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:46,023 INFO : 95% Done
20 Jul 2023 17:47:46,067 INFO : 98% Done
20 Jul 2023 17:47:46,108 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:46,110 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:46,111 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:46,199 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:46,252 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:46,272 INFO : Cleaning up temp tables
20 Jul 2023 17:47:46,499 INFO : Completed import of Skyline document from ATI_Year2019_09-16_2022-01-06_13-55-21.sky.zip
20 Jul 2023 17:47:46,501 INFO : 100% Done
20 Jul 2023 17:47:46,504 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125045/ATI_Year2019_09-16_2022-01-06_13-55-21.sky.zip into the system
20 Jul 2023 17:47:46,504 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125046/ATI_Year2019_17-24_2022-01-06_13-56-36/ATI_Year2019_17-24.skyd into the system
20 Jul 2023 17:47:46,505 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125046/ATI_Year2019_17-24_2022-01-06_13-56-36/ATI_Year2019_17-24.skyd into the system
20 Jul 2023 17:47:46,505 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125046/ATI_Year2019_17-24_2022-01-06_13-56-36.sky.zip into the system
20 Jul 2023 17:47:46,506 INFO : Starting import from ATI_Year2019_17-24_2022-01-06_13-56-36.sky.zip
20 Jul 2023 17:47:46,508 INFO : Starting to import Skyline document from ATI_Year2019_17-24_2022-01-06_13-56-36.sky.zip
20 Jul 2023 17:47:46,511 INFO : Expanding ATI_Year2019_17-24.skyd
20 Jul 2023 17:47:46,584 INFO : Expanding ATI_Year2019_17-24.sky.view
20 Jul 2023 17:47:46,585 INFO : Expanding ATI_Year2019_17-24.sky
20 Jul 2023 17:47:46,594 INFO : 2% Done
20 Jul 2023 17:47:46,657 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:46,659 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:46,807 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:46,816 INFO : 8% Done
20 Jul 2023 17:47:46,882 INFO : 14% Done
20 Jul 2023 17:47:46,942 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:46,942 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:46,948 INFO : 18% Done
20 Jul 2023 17:47:47,001 INFO : 22% Done
20 Jul 2023 17:47:47,041 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,041 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:47,047 INFO : 25% Done
20 Jul 2023 17:47:47,096 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:47,097 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:47,102 INFO : 29% Done
20 Jul 2023 17:47:47,143 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:47,143 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:47,149 INFO : 34% Done
20 Jul 2023 17:47:47,202 INFO : 37% Done
20 Jul 2023 17:47:47,242 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,242 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:47,248 INFO : 42% Done
20 Jul 2023 17:47:47,301 INFO : 48% Done
20 Jul 2023 17:47:47,360 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,361 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:47,367 INFO : 53% Done
20 Jul 2023 17:47:47,424 INFO : 59% Done
20 Jul 2023 17:47:47,485 INFO : 62% Done
20 Jul 2023 17:47:47,526 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:47,526 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:47,531 INFO : 67% Done
20 Jul 2023 17:47:47,580 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:47,581 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:47,586 INFO : 71% Done
20 Jul 2023 17:47:47,628 INFO : 74% Done
20 Jul 2023 17:47:47,669 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,669 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:47,675 INFO : 77% Done
20 Jul 2023 17:47:47,718 INFO : 80% Done
20 Jul 2023 17:47:47,757 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,757 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:47,762 INFO : 84% Done
20 Jul 2023 17:47:47,785 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:47,785 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:47,790 INFO : 87% Done
20 Jul 2023 17:47:47,835 INFO : 91% Done
20 Jul 2023 17:47:47,876 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,876 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:47,880 INFO : 95% Done
20 Jul 2023 17:47:47,925 INFO : 98% Done
20 Jul 2023 17:47:47,964 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:47,966 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:47,967 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:48,047 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:48,101 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:48,120 INFO : Cleaning up temp tables
20 Jul 2023 17:47:48,338 INFO : Completed import of Skyline document from ATI_Year2019_17-24_2022-01-06_13-56-36.sky.zip
20 Jul 2023 17:47:48,339 INFO : 100% Done
20 Jul 2023 17:47:48,343 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125046/ATI_Year2019_17-24_2022-01-06_13-56-36.sky.zip into the system
20 Jul 2023 17:47:48,343 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125047/ATI_Year2019_25-32_2022-01-06_14-05-41/ATI_Year2019_25-32.skyd into the system
20 Jul 2023 17:47:48,343 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125047/ATI_Year2019_25-32_2022-01-06_14-05-41/ATI_Year2019_25-32.skyd into the system
20 Jul 2023 17:47:48,343 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125047/ATI_Year2019_25-32_2022-01-06_14-05-41.sky.zip into the system
20 Jul 2023 17:47:48,344 INFO : Starting import from ATI_Year2019_25-32_2022-01-06_14-05-41.sky.zip
20 Jul 2023 17:47:48,346 INFO : Starting to import Skyline document from ATI_Year2019_25-32_2022-01-06_14-05-41.sky.zip
20 Jul 2023 17:47:48,349 INFO : Expanding ATI_Year2019_25-32.skyd
20 Jul 2023 17:47:48,426 INFO : Expanding ATI_Year2019_25-32.sky.view
20 Jul 2023 17:47:48,427 INFO : Expanding ATI_Year2019_25-32.sky
20 Jul 2023 17:47:48,439 INFO : 2% Done
20 Jul 2023 17:47:48,503 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:48,505 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:48,675 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:48,683 INFO : 8% Done
20 Jul 2023 17:47:48,756 INFO : 12% Done
20 Jul 2023 17:47:48,810 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:48,810 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:48,816 INFO : 17% Done
20 Jul 2023 17:47:48,875 INFO : 23% Done
20 Jul 2023 17:47:48,943 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:48,943 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:48,951 INFO : 25% Done
20 Jul 2023 17:47:49,000 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:49,000 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:49,006 INFO : 29% Done
20 Jul 2023 17:47:49,057 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:49,057 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:49,063 INFO : 33% Done
20 Jul 2023 17:47:49,113 INFO : 37% Done
20 Jul 2023 17:47:49,167 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,167 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:49,174 INFO : 42% Done
20 Jul 2023 17:47:49,233 INFO : 48% Done
20 Jul 2023 17:47:49,296 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,296 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:49,303 INFO : 53% Done
20 Jul 2023 17:47:49,363 INFO : 59% Done
20 Jul 2023 17:47:49,433 INFO : 63% Done
20 Jul 2023 17:47:49,477 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:49,477 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:49,484 INFO : 67% Done
20 Jul 2023 17:47:49,543 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:49,543 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:49,549 INFO : 71% Done
20 Jul 2023 17:47:49,595 INFO : 74% Done
20 Jul 2023 17:47:49,634 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,634 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:49,640 INFO : 77% Done
20 Jul 2023 17:47:49,684 INFO : 80% Done
20 Jul 2023 17:47:49,726 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,726 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:49,731 INFO : 84% Done
20 Jul 2023 17:47:49,755 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:49,755 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:49,760 INFO : 87% Done
20 Jul 2023 17:47:49,804 INFO : 91% Done
20 Jul 2023 17:47:49,844 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,845 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:49,849 INFO : 95% Done
20 Jul 2023 17:47:49,893 INFO : 98% Done
20 Jul 2023 17:47:49,934 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:49,936 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:49,937 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:50,017 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:50,070 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:50,089 INFO : Cleaning up temp tables
20 Jul 2023 17:47:50,333 INFO : Completed import of Skyline document from ATI_Year2019_25-32_2022-01-06_14-05-41.sky.zip
20 Jul 2023 17:47:50,335 INFO : 100% Done
20 Jul 2023 17:47:50,339 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125047/ATI_Year2019_25-32_2022-01-06_14-05-41.sky.zip into the system
20 Jul 2023 17:47:50,339 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125048/ATI_Year2019_33-40_2022-01-06_14-06-56/ATI_Year2019_33-40.skyd into the system
20 Jul 2023 17:47:50,340 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125048/ATI_Year2019_33-40_2022-01-06_14-06-56/ATI_Year2019_33-40.skyd into the system
20 Jul 2023 17:47:50,340 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125048/ATI_Year2019_33-40_2022-01-06_14-06-56.sky.zip into the system
20 Jul 2023 17:47:50,341 INFO : Starting import from ATI_Year2019_33-40_2022-01-06_14-06-56.sky.zip
20 Jul 2023 17:47:50,343 INFO : Starting to import Skyline document from ATI_Year2019_33-40_2022-01-06_14-06-56.sky.zip
20 Jul 2023 17:47:50,347 INFO : Expanding ATI_Year2019_33-40.skyd
20 Jul 2023 17:47:50,429 INFO : Expanding ATI_Year2019_33-40.sky.view
20 Jul 2023 17:47:50,429 INFO : Expanding ATI_Year2019_33-40.sky
20 Jul 2023 17:47:50,439 INFO : 2% Done
20 Jul 2023 17:47:50,504 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:50,506 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:50,664 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:50,673 INFO : 8% Done
20 Jul 2023 17:47:50,740 INFO : 14% Done
20 Jul 2023 17:47:50,800 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:50,800 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:50,806 INFO : 18% Done
20 Jul 2023 17:47:50,859 INFO : 24% Done
20 Jul 2023 17:47:50,918 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:50,918 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:50,924 INFO : 28% Done
20 Jul 2023 17:47:50,973 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:50,973 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:50,979 INFO : 31% Done
20 Jul 2023 17:47:51,019 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:51,019 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:51,025 INFO : 36% Done
20 Jul 2023 17:47:51,077 INFO : 39% Done
20 Jul 2023 17:47:51,119 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,119 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:51,126 INFO : 45% Done
20 Jul 2023 17:47:51,188 INFO : 50% Done
20 Jul 2023 17:47:51,239 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,239 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:51,245 INFO : 54% Done
20 Jul 2023 17:47:51,298 INFO : 59% Done
20 Jul 2023 17:47:51,351 INFO : 63% Done
20 Jul 2023 17:47:51,391 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:51,391 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:51,396 INFO : 66% Done
20 Jul 2023 17:47:51,436 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:51,436 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:51,441 INFO : 70% Done
20 Jul 2023 17:47:51,483 INFO : 73% Done
20 Jul 2023 17:47:51,522 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,522 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:51,527 INFO : 76% Done
20 Jul 2023 17:47:51,569 INFO : 80% Done
20 Jul 2023 17:47:51,616 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,616 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:51,621 INFO : 84% Done
20 Jul 2023 17:47:51,643 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:51,643 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:51,648 INFO : 87% Done
20 Jul 2023 17:47:51,689 INFO : 91% Done
20 Jul 2023 17:47:51,727 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,727 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:51,731 INFO : 95% Done
20 Jul 2023 17:47:51,772 INFO : 98% Done
20 Jul 2023 17:47:51,810 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:51,812 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:51,813 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:51,892 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:51,946 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:51,965 INFO : Cleaning up temp tables
20 Jul 2023 17:47:52,188 INFO : Completed import of Skyline document from ATI_Year2019_33-40_2022-01-06_14-06-56.sky.zip
20 Jul 2023 17:47:52,190 INFO : 100% Done
20 Jul 2023 17:47:52,194 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125048/ATI_Year2019_33-40_2022-01-06_14-06-56.sky.zip into the system
20 Jul 2023 17:47:52,194 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125049/ATI_Year2019_41-48_2022-01-06_14-15-23/ATI_Year2019_41-48.skyd into the system
20 Jul 2023 17:47:52,194 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125049/ATI_Year2019_41-48_2022-01-06_14-15-23/ATI_Year2019_41-48.skyd into the system
20 Jul 2023 17:47:52,194 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125049/ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip into the system
20 Jul 2023 17:47:52,195 INFO : Starting import from ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip
20 Jul 2023 17:47:52,197 INFO : Starting to import Skyline document from ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip
20 Jul 2023 17:47:52,200 INFO : Expanding ATI_Year2019_41-48.skyd
20 Jul 2023 17:47:52,278 INFO : Expanding ATI_Year2019_41-48.sky.view
20 Jul 2023 17:47:52,278 INFO : Expanding ATI_Year2019_41-48.sky
20 Jul 2023 17:47:52,288 INFO : 2% Done
20 Jul 2023 17:47:52,352 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:52,354 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:52,508 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:52,514 INFO : 7% Done
20 Jul 2023 17:47:52,569 INFO : 11% Done
20 Jul 2023 17:47:52,618 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:52,618 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:52,623 INFO : 16% Done
20 Jul 2023 17:47:52,676 INFO : 22% Done
20 Jul 2023 17:47:52,734 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:52,734 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:52,740 INFO : 26% Done
20 Jul 2023 17:47:52,789 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:52,789 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:52,794 INFO : 30% Done
20 Jul 2023 17:47:52,834 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:52,834 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:52,839 INFO : 33% Done
20 Jul 2023 17:47:52,882 INFO : 38% Done
20 Jul 2023 17:47:52,931 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:52,931 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:52,937 INFO : 44% Done
20 Jul 2023 17:47:53,007 INFO : 49% Done
20 Jul 2023 17:47:53,058 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:53,058 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:53,064 INFO : 52% Done
20 Jul 2023 17:47:53,110 INFO : 57% Done
20 Jul 2023 17:47:53,165 INFO : 61% Done
20 Jul 2023 17:47:53,209 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:53,209 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:53,216 INFO : 65% Done
20 Jul 2023 17:47:53,268 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:53,268 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:53,274 INFO : 69% Done
20 Jul 2023 17:47:53,321 INFO : 73% Done
20 Jul 2023 17:47:53,366 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:53,366 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:53,372 INFO : 75% Done
20 Jul 2023 17:47:53,416 INFO : 79% Done
20 Jul 2023 17:47:53,456 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:53,456 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:53,461 INFO : 83% Done
20 Jul 2023 17:47:53,483 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:53,483 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:53,488 INFO : 86% Done
20 Jul 2023 17:47:53,531 INFO : 90% Done
20 Jul 2023 17:47:53,571 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:53,571 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:53,575 INFO : 95% Done
20 Jul 2023 17:47:53,628 INFO : 98% Done
20 Jul 2023 17:47:53,668 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:53,669 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:53,670 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:53,750 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:53,803 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:53,822 INFO : Cleaning up temp tables
20 Jul 2023 17:47:54,067 INFO : Completed import of Skyline document from ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip
20 Jul 2023 17:47:54,069 INFO : 100% Done
20 Jul 2023 17:47:54,072 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125049/ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip into the system
20 Jul 2023 17:47:54,072 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125050/ATI_Year2019_49-56_2022-01-06_14-16-47/ATI_Year2019_49-56.skyd into the system
20 Jul 2023 17:47:54,073 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125050/ATI_Year2019_49-56_2022-01-06_14-16-47/ATI_Year2019_49-56.skyd into the system
20 Jul 2023 17:47:54,073 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125050/ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip into the system
20 Jul 2023 17:47:54,074 INFO : Starting import from ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip
20 Jul 2023 17:47:54,076 INFO : Starting to import Skyline document from ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip
20 Jul 2023 17:47:54,079 INFO : Expanding ATI_Year2019_49-56.skyd
20 Jul 2023 17:47:54,154 INFO : Expanding ATI_Year2019_49-56.sky.view
20 Jul 2023 17:47:54,154 INFO : Expanding ATI_Year2019_49-56.sky
20 Jul 2023 17:47:54,164 INFO : 2% Done
20 Jul 2023 17:47:54,229 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:54,232 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:54,402 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:54,410 INFO : 6% Done
20 Jul 2023 17:47:54,487 INFO : 11% Done
20 Jul 2023 17:47:54,537 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:54,537 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:54,544 INFO : 17% Done
20 Jul 2023 17:47:54,608 INFO : 22% Done
20 Jul 2023 17:47:54,660 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:54,660 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:54,665 INFO : 25% Done
20 Jul 2023 17:47:54,713 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:54,714 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:54,719 INFO : 28% Done
20 Jul 2023 17:47:54,760 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:54,760 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:54,765 INFO : 31% Done
20 Jul 2023 17:47:54,810 INFO : 36% Done
20 Jul 2023 17:47:54,859 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:54,860 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:54,866 INFO : 41% Done
20 Jul 2023 17:47:54,928 INFO : 47% Done
20 Jul 2023 17:47:54,989 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:54,989 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:54,994 INFO : 51% Done
20 Jul 2023 17:47:55,043 INFO : 57% Done
20 Jul 2023 17:47:55,106 INFO : 62% Done
20 Jul 2023 17:47:55,157 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:55,157 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:55,163 INFO : 66% Done
20 Jul 2023 17:47:55,213 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:55,214 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:55,219 INFO : 70% Done
20 Jul 2023 17:47:55,260 INFO : 73% Done
20 Jul 2023 17:47:55,298 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:55,298 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:55,303 INFO : 76% Done
20 Jul 2023 17:47:55,345 INFO : 79% Done
20 Jul 2023 17:47:55,384 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:55,384 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:55,389 INFO : 83% Done
20 Jul 2023 17:47:55,410 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:55,410 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:55,415 INFO : 87% Done
20 Jul 2023 17:47:55,455 INFO : 90% Done
20 Jul 2023 17:47:55,493 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:55,493 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:55,498 INFO : 95% Done
20 Jul 2023 17:47:55,548 INFO : 98% Done
20 Jul 2023 17:47:55,586 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:55,588 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:55,588 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:55,670 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:55,721 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:55,739 INFO : Cleaning up temp tables
20 Jul 2023 17:47:55,968 INFO : Completed import of Skyline document from ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip
20 Jul 2023 17:47:55,973 INFO : 100% Done
20 Jul 2023 17:47:55,976 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125050/ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip into the system
20 Jul 2023 17:47:55,976 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125051/ATI_Year2019_57-60_2022-01-06_14-20-45/ATI_Year2019_57-60.skyd into the system
20 Jul 2023 17:47:55,976 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125051/ATI_Year2019_57-60_2022-01-06_14-20-45/ATI_Year2019_57-60.skyd into the system
20 Jul 2023 17:47:55,977 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125051/ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip into the system
20 Jul 2023 17:47:55,978 INFO : Starting import from ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip
20 Jul 2023 17:47:55,980 INFO : Starting to import Skyline document from ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip
20 Jul 2023 17:47:55,981 INFO : Expanding ATI_Year2019_57-60.skyd
20 Jul 2023 17:47:56,027 INFO : Expanding ATI_Year2019_57-60.sky.view
20 Jul 2023 17:47:56,027 INFO : Expanding ATI_Year2019_57-60.sky
20 Jul 2023 17:47:56,036 INFO : 2% Done
20 Jul 2023 17:47:56,074 DEBUG: Starting to load chromatogram headers
20 Jul 2023 17:47:56,076 DEBUG: Done loading chromatogram headers
20 Jul 2023 17:47:56,225 INFO : Inserting 0.28 sp|P01083|IAA2_WHEAT
20 Jul 2023 17:47:56,231 INFO : 7% Done
20 Jul 2023 17:47:56,267 INFO : 12% Done
20 Jul 2023 17:47:56,304 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,304 INFO : Inserting 0.19 sp|P01085|IAA1_WHEAT
20 Jul 2023 17:47:56,310 INFO : 17% Done
20 Jul 2023 17:47:56,350 INFO : 22% Done
20 Jul 2023 17:47:56,382 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,382 INFO : Inserting 0.53 sp|P01084|IAA5_WHEAT
20 Jul 2023 17:47:56,387 INFO : 25% Done
20 Jul 2023 17:47:56,419 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:56,419 INFO : Inserting CM1 sp|P16850|IAAC1_WHEAT
20 Jul 2023 17:47:56,423 INFO : 29% Done
20 Jul 2023 17:47:56,449 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:56,449 INFO : Inserting CM2 sp|P16851|IAAC2_WHEAT
20 Jul 2023 17:47:56,454 INFO : 34% Done
20 Jul 2023 17:47:56,495 INFO : 39% Done
20 Jul 2023 17:47:56,529 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,529 INFO : Inserting CM3 sp|P17314|IAAC3_WHEAT
20 Jul 2023 17:47:56,535 INFO : 45% Done
20 Jul 2023 17:47:56,582 INFO : 50% Done
20 Jul 2023 17:47:56,614 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,614 INFO : Inserting CM16 sp|P16159|IAC16_WHEAT
20 Jul 2023 17:47:56,619 INFO : 55% Done
20 Jul 2023 17:47:56,656 INFO : 60% Done
20 Jul 2023 17:47:56,697 INFO : 65% Done
20 Jul 2023 17:47:56,729 DEBUG: Total peptides inserted: 3
20 Jul 2023 17:47:56,729 INFO : Inserting CM17 tr|Q41540|Q41540_WHEAT
20 Jul 2023 17:47:56,734 INFO : 69% Done
20 Jul 2023 17:47:56,765 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:56,765 INFO : Inserting WASI sp|P16347|IAAS_WHEAT
20 Jul 2023 17:47:56,770 INFO : 72% Done
20 Jul 2023 17:47:56,798 INFO : 75% Done
20 Jul 2023 17:47:56,824 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,824 INFO : Inserting CMX1/3 sp|Q43723|IACX1_WHEAT
20 Jul 2023 17:47:56,828 INFO : 78% Done
20 Jul 2023 17:47:56,856 INFO : 81% Done
20 Jul 2023 17:47:56,882 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,882 INFO : Inserting CMX2 sp|Q43691|IACX2_WHEAT
20 Jul 2023 17:47:56,887 INFO : 85% Done
20 Jul 2023 17:47:56,902 DEBUG: Total peptides inserted: 1
20 Jul 2023 17:47:56,902 INFO : Inserting WCI sp|P83207|ICIW2_WHEAT
20 Jul 2023 17:47:56,906 INFO : 88% Done
20 Jul 2023 17:47:56,935 INFO : 92% Done
20 Jul 2023 17:47:56,962 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:56,962 INFO : Inserting sp|P-----|IBB3_WHEAT
20 Jul 2023 17:47:56,965 INFO : 95% Done
20 Jul 2023 17:47:56,994 INFO : 98% Done
20 Jul 2023 17:47:57,020 DEBUG: Total peptides inserted: 2
20 Jul 2023 17:47:57,022 INFO : Done parsing Skyline document.
20 Jul 2023 17:47:57,022 INFO : Creating and populating temp tables for Proportion values
20 Jul 2023 17:47:57,106 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo
20 Jul 2023 17:47:57,138 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo
20 Jul 2023 17:47:57,150 INFO : Cleaning up temp tables
20 Jul 2023 17:47:57,399 INFO : Completed import of Skyline document from ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip
20 Jul 2023 17:47:57,401 INFO : 100% Done
20 Jul 2023 17:47:57,405 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202019/xar/experiments_and_runs.xar.exploded/Run125051/ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip into the system
20 Jul 2023 17:47:57,430 INFO : Done importing xar
20 Jul 2023 17:47:57,432 INFO : Loading pages and webpart properties
20 Jul 2023 17:47:57,484 INFO : Done importing 3 page(s) with 4 webpart(s)
20 Jul 2023 17:47:57,484 INFO : Loading File Browser config
20 Jul 2023 17:47:57,484 INFO : Done importing File Browser config
20 Jul 2023 17:47:57,485 INFO : Starting Sample Status Data import
20 Jul 2023 17:47:57,485 INFO : No sample types XAR file to process.
20 Jul 2023 17:47:57,485 INFO : Finished importing Sample Status Data
20 Jul 2023 17:47:57,489 INFO : Starting data import from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:47:57,490 INFO : A row containing [Name: 'Reagent Change', Description: 'null', Color: '800000'] values already exists. Skipping
20 Jul 2023 17:47:57,491 INFO : A row containing [Name: 'Instrumentation Change', Description: 'null', Color: 'FF0000'] values already exists. Skipping
20 Jul 2023 17:47:57,491 INFO : A row containing [Name: 'Technician Change', Description: 'null', Color: '0000FF'] values already exists. Skipping
20 Jul 2023 17:47:57,492 INFO : A row containing [Name: 'Instrument Downtime', Description: 'null', Color: 'CCCC00'] values already exists. Skipping
20 Jul 2023 17:47:57,492 INFO : Finished importing 0 rows from QCAnnotationType.tsv into targetedms.QCAnnotationType
20 Jul 2023 17:47:57,492 INFO : Done importing folder archive for Year 2019
20 Jul 2023 17:47:57,492 INFO : Done importing subfolders and container tabs
20 Jul 2023 17:47:57,492 INFO : Importing files metadata.
20 Jul 2023 17:47:57,492 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI] Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export
20 Jul 2023 17:47:57,493 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2015] Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2015
20 Jul 2023 17:47:57,493 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2017] Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2017
20 Jul 2023 17:47:57,494 DEBUG: [/Panorama Public/2023/KIT Food Chemistry - WheatScan - ATI/Year 2019] Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT Food Chemistry - WheatScan - ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year 2019
20 Jul 2023 17:47:57,494 INFO :
20 Jul 2023 17:47:57,494 INFO : Experiment import completed successfully.
20 Jul 2023 17:47:57,494 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'
20 Jul 2023 17:47:57,514 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask' at location 'webserver-high-priority'
20 Jul 2023 17:47:57,514 INFO :
20 Jul 2023 17:47:57,514 INFO : Checking for library folders.
20 Jul 2023 17:47:57,517 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyLibraryStateTask'
20 Jul 2023 17:47:57,533 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'
20 Jul 2023 17:47:57,533 INFO :
20 Jul 2023 17:47:57,533 INFO : Finishing up experiment copy.
20 Jul 2023 17:47:57,534 INFO : Adding runs imported in subfolders.
20 Jul 2023 17:47:57,575 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.
20 Jul 2023 17:47:57,575 INFO : Setting version on new experiment to 1
20 Jul 2023 17:47:57,575 INFO : Assigning a ProteomeXchange ID.
20 Jul 2023 17:47:57,718 INFO : Assigning a DOI.
20 Jul 2023 17:47:58,431 INFO : Assigned DOI: 10.6069/0gma-y658
20 Jul 2023 17:47:58,435 INFO : Updating permanent link to point to the new copy of the data.
20 Jul 2023 17:47:58,438 INFO : Removing copy permissions given to Panorama Public
20 Jul 2023 17:47:58,470 INFO : Adding read permissions to all users that are folder admins in the source folder.
20 Jul 2023 17:47:58,471 INFO : Assigning PanoramaPublicSubmitterRole to sabrina.geisslitz@kit.edu
20 Jul 2023 17:47:58,471 INFO : Assigning PanoramaPublicSubmitterRole to katharina.scherf@kit.edu
20 Jul 2023 17:47:58,471 INFO : Assigning PanoramaPublicSubmitterRole to sabrina.geisslitz@kit.edu
20 Jul 2023 17:47:58,471 INFO : User sabrina.geisslitz@kit.edu is already a member of group Panorama Public Submitters
20 Jul 2023 17:47:58,471 INFO : User katharina.scherf@kit.edu is already a member of group Panorama Public Submitters
20 Jul 2023 17:47:58,472 INFO : User sabrina.geisslitz@kit.edu is already a member of group Panorama Public Submitters
20 Jul 2023 17:47:58,480 INFO : Updating the 'Raw Data' tab configuration
20 Jul 2023 17:47:58,485 INFO : Updating dataFileUrls for run ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip; targetedms run ID 167537
20 Jul 2023 17:47:58,486 INFO : Updating dataFileUrl...
20 Jul 2023 17:47:58,486 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125022/ATI_Year2015_01-07_2022-01-06_11-33-22.sky.zip
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20 Jul 2023 17:47:58,502 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI_c9f5ce10-098b-103c-afc6-fea6ddf51ba4/_temp__2023-07-20_17-33-59/export/subfolders/Year%202015/xar/experiments_and_runs.xar.exploded/Run125027/ATI_Year2015_28-35_2022-01-06_11-58-04/ATI_Year2015_28-35.skyd
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20 Jul 2023 17:47:58,581 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI/Year%202019/@files/ATI_Year2019_41-48_2022-01-06_14-15-23.sky.zip
20 Jul 2023 17:47:58,583 INFO : Updating dataFileUrls for run ATI_Year2019_49-56_2022-01-06_14-16-47.sky.zip; targetedms run ID 167560
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20 Jul 2023 17:47:58,586 INFO : Updating dataFileUrls for run ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip; targetedms run ID 167561
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20 Jul 2023 17:47:58,588 INFO : to: file:///data/labkey/files/Panorama%20Public/2023/KIT%20Food%20Chemistry%20-%20WheatScan%20-%20ATI/Year%202019/@files/ATI_Year2019_57-60_2022-01-06_14-20-45.sky.zip
20 Jul 2023 17:47:58,595 INFO : Making folder public.
20 Jul 2023 17:47:58,606 INFO : Hiding the Data Pipeline tab.
20 Jul 2023 17:47:58,621 INFO : Updating Submission. Setting copiedExperimentId to 1656
20 Jul 2023 17:47:58,684 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'