Copying experiment: Profiling the diversity of agonist-selective effects on the proximal proteome environment of G protein-coupled receptors: /Panorama Public/2022/UCSF Krogan Lab

Copying experiment: Profiling the diversity of agonist-selective effects on the proximal proteome environment of G protein-coupled receptors

UCSF Krogan Lab - MOR-APEX

Job Status

Created:

2022-02-01 15:21:36

Modified:

2022-02-01 15:22:56

Email:

vsharma@uw.edu

Status:

COMPLETE

Info:

Description:

Copying experiment: Profiling the diversity of agonist-selective effects on the proximal proteome environment of G protein-coupled receptors

File Path:

/data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF Krogan Lab - MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/Experiment_1438.log

Files:

Experiment_1438.log

Join job:

Status	Description

Split jobs:

Status	Description

Completed Runs:

MOR_APEX_quant.sky.zip

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Log File

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01 Feb 2022 15:21:36,106 INFO : Copying experiment "Profiling the diversity of agonist-selective effects on the proximal proteome environment of G protein-coupled receptors" from folder /UCSF - Krogan Lab/MOR-APEX to /Panorama Public/2022/UCSF Krogan Lab - MOR-APEX

01 Feb 2022 15:21:36,106 INFO : =======================================

01 Feb 2022 15:21:36,167 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask' at location 'webserver-high-priority'

01 Feb 2022 15:21:36,167 INFO :

01 Feb 2022 15:21:36,167 INFO : Exporting experiment.

01 Feb 2022 15:22:08,715 INFO : Exporting files metadata.

01 Feb 2022 15:22:08,715 DEBUG: [/UCSF - Krogan Lab/MOR-APEX]  Writing files metadata to /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF Krogan Lab - MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export

01 Feb 2022 15:22:08,758 INFO :

01 Feb 2022 15:22:08,758 INFO : Experiment export completed successfully.

01 Feb 2022 15:22:08,758 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentExportTask'

01 Feb 2022 15:22:08,788 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask' at location 'webserver-high-priority'

01 Feb 2022 15:22:08,788 INFO :

01 Feb 2022 15:22:08,788 INFO : Importing experiment.

01 Feb 2022 15:22:08,790 DEBUG: [/Panorama Public/2022/UCSF Krogan Lab - MOR-APEX] Importing folder properties from: /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF Krogan Lab - MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export

01 Feb 2022 15:22:08,792 INFO : Loading folder properties (folder type, settings and active modules)

01 Feb 2022 15:22:08,792 DEBUG: [/Panorama Public/2022/UCSF Krogan Lab - MOR-APEX] Folder type: Targeted MS

01 Feb 2022 15:22:08,793 DEBUG: [/Panorama Public/2022/UCSF Krogan Lab - MOR-APEX] Active modules: Pipeline, Internal, TargetedMS, Experiment, Issues, Query, Search, PanoramaPublic, Announcements, Core, FileContent, Wiki, Assay, API, MS2

01 Feb 2022 15:22:08,867 INFO : Done importing folder properties (folder type, settings and active modules)

01 Feb 2022 15:22:08,870 INFO : Loading etl definitions

01 Feb 2022 15:22:08,872 INFO : Loading wikis

01 Feb 2022 15:22:08,873 INFO : 0 wikis imported

01 Feb 2022 15:22:08,873 INFO : Done importing wikis

01 Feb 2022 15:22:08,873 INFO : Starting to copy files

01 Feb 2022 15:22:28,107 INFO : Copied 74 files

01 Feb 2022 15:22:28,107 INFO : Ensuring exp.data rows exist for imported files

01 Feb 2022 15:22:28,460 INFO : Starting Sample Type and Data Class import

01 Feb 2022 15:22:28,461 INFO : No types XAR file to process.

01 Feb 2022 15:22:28,462 INFO : Finished importing Sample Types and Data Classes

01 Feb 2022 15:22:28,481 INFO : Loading xar

01 Feb 2022 15:22:30,653 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip'

01 Feb 2022 15:22:30,655 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip.Core'

01 Feb 2022 15:22:30,657 DEBUG: Finished loading Protocol with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip.Output'

01 Feb 2022 15:22:30,657 DEBUG: Protocol import complete

01 Feb 2022 15:22:30,658 DEBUG: Finished loading Experiment with LSID 'urn:lsid:uw.edu:Experiment.Folder-9814:Profiling+the+diversity+of+agonist+selective+effects+on+the+proximal+proteome+environment+of+G+protein-coupled+receptors'

01 Feb 2022 15:22:30,659 DEBUG: Experiment/Run group import complete

01 Feb 2022 15:22:30,667 DEBUG: Protocol action set import complete

01 Feb 2022 15:22:30,679 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip'

01 Feb 2022 15:22:30,686 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:skyd.Folder-9814:41307ff4-572d-103a-93e1-fea6ddf5fdda'

01 Feb 2022 15:22:30,690 DEBUG: Finished loading Data with LSID 'urn:lsid:uw.edu:UploadedFile.Folder-9814:41307f2a-572d-103a-93e1-fea6ddf5fdda'

01 Feb 2022 15:22:30,691 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip.Core'

01 Feb 2022 15:22:30,695 DEBUG: Finished loading ProtocolApplication with LSID 'urn:lsid:uw.edu:Protocol.Folder-9814:TargetedMS.ImportSkyZip.Output'

01 Feb 2022 15:22:30,696 DEBUG: Finished loading ExperimentRun with LSID 'urn:lsid:uw.edu:Run.Folder-9814:41308213-572d-103a-93e1-fea6ddf5fdda'

01 Feb 2022 15:22:30,698 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant/201804_MOR_APEX_quant.skyd into the system

01 Feb 2022 15:22:30,698 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant/201804_MOR_APEX_quant.skyd into the system

01 Feb 2022 15:22:30,698 DEBUG: Trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant.sky.zip into the system

01 Feb 2022 15:22:30,701 INFO : Starting import from MOR_APEX_quant.sky.zip

01 Feb 2022 15:22:30,704 INFO : Starting to import Skyline document from MOR_APEX_quant.sky.zip

01 Feb 2022 15:22:30,718 INFO : Expanding HUMAN_APEX.protdb

01 Feb 2022 15:22:32,877 INFO : Expanding BTL30.blib

01 Feb 2022 15:22:33,030 INFO : Expanding MOR_APEX_Fusion.blib

01 Feb 2022 15:22:33,768 INFO : Expanding 201804_MOR_APEX_quant.skyd

01 Feb 2022 15:22:34,117 INFO : Expanding 201804_MOR_APEX_quant.sky.view

01 Feb 2022 15:22:34,117 INFO : Expanding 201804_MOR_APEX_quant.sky

01 Feb 2022 15:22:34,201 WARN : The version of this Skyline document is 21.2. This is newer than the highest supported version 20.22

01 Feb 2022 15:22:34,797 DEBUG: Starting to load chromatogram headers

01 Feb 2022 15:22:34,828 DEBUG: Done loading chromatogram headers

01 Feb 2022 15:22:35,087 INFO : Inserting sp|Q9H3P7|GCP60_HUMAN

01 Feb 2022 15:22:35,100 INFO : 1% Done

01 Feb 2022 15:22:35,316 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:35,320 INFO : Inserting sp|P52594|AGFG1_HUMAN

01 Feb 2022 15:22:35,379 INFO : 2% Done

01 Feb 2022 15:22:35,520 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:35,523 INFO : Inserting sp|Q9Y243|AKT3_HUMAN

01 Feb 2022 15:22:35,530 INFO : 3% Done

01 Feb 2022 15:22:35,715 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:35,718 INFO : Inserting sp|O95782|AP2A1_HUMAN

01 Feb 2022 15:22:35,724 INFO : 4% Done

01 Feb 2022 15:22:35,889 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:35,904 INFO : Inserting sp|P63010|AP2B1_HUMAN

01 Feb 2022 15:22:35,912 INFO : 5% Done

01 Feb 2022 15:22:36,089 INFO : 6% Done

01 Feb 2022 15:22:36,141 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:36,144 INFO : Inserting sp|Q96CW1|AP2M1_HUMAN

01 Feb 2022 15:22:36,312 INFO : 7% Done

01 Feb 2022 15:22:36,402 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:36,405 INFO : Inserting sp|P53680|AP2S1_HUMAN

01 Feb 2022 15:22:36,496 INFO : 8% Done

01 Feb 2022 15:22:36,538 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:36,542 INFO : Inserting sp|Q9UKG1|DP13A_HUMAN

01 Feb 2022 15:22:36,654 INFO : 9% Done

01 Feb 2022 15:22:36,701 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:36,705 INFO : Inserting sp|P49407|ARRB1_HUMAN

01 Feb 2022 15:22:36,851 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:36,860 INFO : Inserting sp|P32121|ARRB2_HUMAN

01 Feb 2022 15:22:36,866 INFO : 10% Done

01 Feb 2022 15:22:37,042 INFO : 11% Done

01 Feb 2022 15:22:37,085 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:37,095 INFO : Inserting sp|P05023|AT1A1_HUMAN

01 Feb 2022 15:22:37,195 INFO : 12% Done

01 Feb 2022 15:22:37,239 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:37,242 INFO : Inserting sp|P20020|AT2B1_HUMAN

01 Feb 2022 15:22:37,375 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:37,378 INFO : Inserting sp|Q9BY67|CADM1_HUMAN

01 Feb 2022 15:22:37,384 INFO : 13% Done

01 Feb 2022 15:22:37,520 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:37,523 INFO : Inserting sp|P23528|COF1_HUMAN

01 Feb 2022 15:22:37,529 INFO : 14% Done

01 Feb 2022 15:22:37,664 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:37,668 INFO : Inserting sp|Q9Y2V7|COG6_HUMAN

01 Feb 2022 15:22:37,723 INFO : 15% Done

01 Feb 2022 15:22:37,813 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:37,816 INFO : Inserting sp|Q13619|CUL4A_HUMAN

01 Feb 2022 15:22:37,870 INFO : 16% Done

01 Feb 2022 15:22:38,008 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:38,011 INFO : Inserting sp|P14868|SYDC_HUMAN

01 Feb 2022 15:22:38,063 INFO : 17% Done

01 Feb 2022 15:22:38,154 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:38,158 INFO : Inserting sp|O75165|DJC13_HUMAN

01 Feb 2022 15:22:38,257 INFO : 18% Done

01 Feb 2022 15:22:38,394 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:38,397 INFO : Inserting sp|Q15075|EEA1_HUMAN

01 Feb 2022 15:22:38,402 INFO : 19% Done

01 Feb 2022 15:22:38,526 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:38,529 INFO : Inserting sp|Q9Y2J2|E41L3_HUMAN

01 Feb 2022 15:22:38,582 INFO : 20% Done

01 Feb 2022 15:22:38,671 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:38,674 INFO : Inserting sp|Q9Y6I3|EPN1_HUMAN

01 Feb 2022 15:22:38,726 INFO : 21% Done

01 Feb 2022 15:22:38,869 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:38,872 INFO : Inserting sp|O95208|EPN2_HUMAN

01 Feb 2022 15:22:38,926 INFO : 22% Done

01 Feb 2022 15:22:39,014 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:39,018 INFO : Inserting sp|P42566|EPS15_HUMAN

01 Feb 2022 15:22:39,123 INFO : 23% Done

01 Feb 2022 15:22:39,216 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:39,220 INFO : Inserting sp|Q9UBC2|EP15R_HUMAN

01 Feb 2022 15:22:39,269 DEBUG: Total peptides inserted: 1

01 Feb 2022 15:22:39,273 INFO : Inserting sp|Q9UBC2|EP15R_HUMAN

01 Feb 2022 15:22:39,280 INFO : 24% Done

01 Feb 2022 15:22:39,470 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:39,474 INFO : Inserting sp|O75477|ERLN1_HUMAN

01 Feb 2022 15:22:39,479 INFO : 25% Done

01 Feb 2022 15:22:39,604 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:39,607 INFO : Inserting sp|O94905|ERLN2_HUMAN

01 Feb 2022 15:22:39,736 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:39,739 INFO : Inserting sp|O95677|EYA4_HUMAN

01 Feb 2022 15:22:39,793 INFO : 26% Done

01 Feb 2022 15:22:39,929 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:39,932 INFO : Inserting sp|Q9Y285|SYFA_HUMAN

01 Feb 2022 15:22:39,984 INFO : 27% Done

01 Feb 2022 15:22:40,074 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:40,080 INFO : Inserting sp|Q06787|FMR1_HUMAN

01 Feb 2022 15:22:40,180 INFO : 28% Done

01 Feb 2022 15:22:40,270 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:40,273 INFO : Inserting sp|P51114|FXR1_HUMAN

01 Feb 2022 15:22:40,325 INFO : 29% Done

01 Feb 2022 15:22:40,419 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:40,422 INFO : Inserting sp|Q13480|GAB1_HUMAN

01 Feb 2022 15:22:40,518 INFO : 30% Done

01 Feb 2022 15:22:40,603 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:40,606 INFO : Inserting sp|P04406|G3P_HUMAN

01 Feb 2022 15:22:40,658 INFO : 31% Done

01 Feb 2022 15:22:40,795 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:40,798 INFO : Inserting sp|P41250|SYG_HUMAN

01 Feb 2022 15:22:40,854 INFO : 32% Done

01 Feb 2022 15:22:40,944 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:40,948 INFO : Inserting sp|Q92538|GBF1_HUMAN

01 Feb 2022 15:22:41,036 INFO : 33% Done

01 Feb 2022 15:22:41,081 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,084 INFO : Inserting sp|P29992|GNA11_HUMAN

01 Feb 2022 15:22:41,184 INFO : 34% Done

01 Feb 2022 15:22:41,228 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,232 INFO : Inserting sp|Q14344|GNA13_HUMAN

01 Feb 2022 15:22:41,373 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,376 INFO : Inserting sp|P63096|GNAI1_HUMAN

01 Feb 2022 15:22:41,382 INFO : 35% Done

01 Feb 2022 15:22:41,526 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,530 INFO : Inserting sp|P04899|GNAI2_HUMAN

01 Feb 2022 15:22:41,582 INFO : 36% Done

01 Feb 2022 15:22:41,671 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,675 INFO : Inserting sp|P08754|GNAI3_HUMAN

01 Feb 2022 15:22:41,726 INFO : 37% Done

01 Feb 2022 15:22:41,817 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,821 INFO : Inserting sp|P50148|GNAQ_HUMAN

01 Feb 2022 15:22:41,918 INFO : 38% Done

01 Feb 2022 15:22:41,961 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:41,964 INFO : Inserting sp|Q5JWF2|GNAS1_HUMAN

01 Feb 2022 15:22:42,061 INFO : 39% Done

01 Feb 2022 15:22:42,103 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:42,107 INFO : Inserting sp|P19086|GNAZ_HUMAN

01 Feb 2022 15:22:42,244 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:42,246 INFO : Inserting sp|P62873|GBB1_HUMAN

01 Feb 2022 15:22:42,253 INFO : 40% Done

01 Feb 2022 15:22:42,392 INFO : 41% Done

01 Feb 2022 15:22:42,435 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:42,438 INFO : Inserting sp|P62879|GBB2_HUMAN

01 Feb 2022 15:22:42,595 INFO : 42% Done

01 Feb 2022 15:22:42,638 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:42,641 INFO : Inserting sp|Q9HAV0|GBB4_HUMAN

01 Feb 2022 15:22:42,733 INFO : 43% Done

01 Feb 2022 15:22:42,827 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:42,830 INFO : Inserting sp|Q08379|GOGA2_HUMAN

01 Feb 2022 15:22:42,932 INFO : 44% Done

01 Feb 2022 15:22:42,975 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:42,982 INFO : Inserting sp|Q08378|GOGA3_HUMAN

01 Feb 2022 15:22:43,079 INFO : 45% Done

01 Feb 2022 15:22:43,122 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:43,125 INFO : Inserting sp|Q8NFJ5|RAI3_HUMAN

01 Feb 2022 15:22:43,270 INFO : 46% Done

01 Feb 2022 15:22:43,313 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:43,316 INFO : Inserting sp|Q9NQ84|GPC5C_HUMAN

01 Feb 2022 15:22:43,460 INFO : 47% Done

01 Feb 2022 15:22:43,503 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:43,506 INFO : Inserting sp|Q4V328|GRAP1_HUMAN

01 Feb 2022 15:22:43,604 INFO : 48% Done

01 Feb 2022 15:22:43,739 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:43,747 INFO : Inserting sp|P43250|GRK6_HUMAN

01 Feb 2022 15:22:43,794 INFO : 49% Done

01 Feb 2022 15:22:43,970 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:43,974 INFO : Inserting sp|O00291|HIP1_HUMAN

01 Feb 2022 15:22:43,980 INFO : 50% Done

01 Feb 2022 15:22:44,150 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:44,153 INFO : Inserting sp|P41252|SYIC_HUMAN

01 Feb 2022 15:22:44,159 INFO : 51% Done

01 Feb 2022 15:22:44,312 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:44,318 INFO : Inserting sp|Q9NZM3|ITSN2_HUMAN

01 Feb 2022 15:22:44,327 INFO : 52% Done

01 Feb 2022 15:22:44,470 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:44,474 INFO : Inserting sp|Q15046|SYK_HUMAN

01 Feb 2022 15:22:44,532 INFO : 53% Done

01 Feb 2022 15:22:44,619 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:44,628 INFO : Inserting sp|Q96CX2|KCD12_HUMAN

01 Feb 2022 15:22:44,684 INFO : 54% Done

01 Feb 2022 15:22:44,778 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:44,783 INFO : Inserting sp|Q12768|STRUM_HUMAN

01 Feb 2022 15:22:44,894 INFO : 55% Done

01 Feb 2022 15:22:44,997 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:45,005 INFO : Inserting sp|P11279|LAMP1_HUMAN

01 Feb 2022 15:22:45,056 INFO : 56% Done

01 Feb 2022 15:22:45,100 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:45,103 INFO : Inserting sp|P13473|LAMP2_HUMAN

01 Feb 2022 15:22:45,239 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:45,242 INFO : Inserting sp|Q6IAA8|LTOR1_HUMAN

01 Feb 2022 15:22:45,247 INFO : 57% Done

01 Feb 2022 15:22:45,377 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:45,380 INFO : Inserting sp|Q96L34|MARK4_HUMAN

01 Feb 2022 15:22:45,425 INFO : 58% Done

01 Feb 2022 15:22:45,564 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:45,568 INFO : Inserting sp|P26038|MOES_HUMAN

01 Feb 2022 15:22:45,574 INFO : 59% Done

01 Feb 2022 15:22:45,741 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:45,744 INFO : Inserting sp|Q16625|OCLN_HUMAN

01 Feb 2022 15:22:45,801 INFO : 60% Done

01 Feb 2022 15:22:45,895 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:45,900 INFO : Inserting sp|Q15084|PDIA6_HUMAN

01 Feb 2022 15:22:46,000 INFO : 61% Done

01 Feb 2022 15:22:46,049 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:46,052 INFO : Inserting sp|Q13492|PICAL_HUMAN

01 Feb 2022 15:22:46,155 INFO : 62% Done

01 Feb 2022 15:22:46,246 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:46,248 INFO : Inserting sp|P51149|RAB7A_HUMAN

01 Feb 2022 15:22:46,340 INFO : 63% Done

01 Feb 2022 15:22:46,383 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:46,386 INFO : Inserting sp|P61225|RAP2B_HUMAN

01 Feb 2022 15:22:46,518 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:46,521 INFO : Inserting sp|P35241|RADI_HUMAN

01 Feb 2022 15:22:46,526 INFO : 64% Done

01 Feb 2022 15:22:46,663 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:46,666 INFO : Inserting sp|Q02543|RL18A_HUMAN

01 Feb 2022 15:22:46,672 INFO : 65% Done

01 Feb 2022 15:22:46,819 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:46,821 INFO : Inserting sp|P35268|RL22_HUMAN

01 Feb 2022 15:22:46,883 INFO : 66% Done

01 Feb 2022 15:22:46,934 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:46,938 INFO : Inserting sp|P46779|RL28_HUMAN

01 Feb 2022 15:22:47,055 INFO : 67% Done

01 Feb 2022 15:22:47,107 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,110 INFO : Inserting sp|P62888|RL30_HUMAN

01 Feb 2022 15:22:47,269 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,272 INFO : Inserting sp|P18077|RL35A_HUMAN

01 Feb 2022 15:22:47,277 INFO : 68% Done

01 Feb 2022 15:22:47,434 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,438 INFO : Inserting sp|Q02878|RL6_HUMAN

01 Feb 2022 15:22:47,445 INFO : 69% Done

01 Feb 2022 15:22:47,583 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,587 INFO : Inserting sp|P32969|RL9_HUMAN

01 Feb 2022 15:22:47,646 INFO : 70% Done

01 Feb 2022 15:22:47,745 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,749 INFO : Inserting sp|P62280|RS11_HUMAN

01 Feb 2022 15:22:47,861 INFO : 71% Done

01 Feb 2022 15:22:47,913 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:47,916 INFO : Inserting sp|Q96BR1|SGK3_HUMAN

01 Feb 2022 15:22:48,032 INFO : 72% Done

01 Feb 2022 15:22:48,129 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:48,132 INFO : Inserting sp|Q15758|AAAT_HUMAN

01 Feb 2022 15:22:48,229 INFO : 73% Done

01 Feb 2022 15:22:48,272 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:48,275 INFO : Inserting sp|Q8WU79|SMAP2_HUMAN

01 Feb 2022 15:22:48,372 INFO : 74% Done

01 Feb 2022 15:22:48,414 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:48,417 INFO : Inserting sp|Q96L92|SNX27_HUMAN

01 Feb 2022 15:22:48,600 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:48,603 INFO : Inserting sp|O60493|SNX3_HUMAN

01 Feb 2022 15:22:48,740 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:48,744 INFO : Inserting sp|O60784|TOM1_HUMAN

01 Feb 2022 15:22:48,750 INFO : 75% Done

01 Feb 2022 15:22:48,886 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:48,889 INFO : Inserting sp|Q6ZVM7|TM1L2_HUMAN

01 Feb 2022 15:22:48,895 INFO : 76% Done

01 Feb 2022 15:22:49,075 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:49,078 INFO : Inserting sp|Q9UEU0|VTI1B_HUMAN

01 Feb 2022 15:22:49,083 INFO : 77% Done

01 Feb 2022 15:22:49,217 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:49,220 INFO : Inserting sp|Q8IWB7|WDFY1_HUMAN

01 Feb 2022 15:22:49,226 INFO : 78% Done

01 Feb 2022 15:22:49,406 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:49,409 INFO : Inserting sp|Q9H4A3|WNK1_HUMAN

01 Feb 2022 15:22:49,415 INFO : 79% Done

01 Feb 2022 15:22:49,555 INFO : 80% Done

01 Feb 2022 15:22:49,598 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:49,602 INFO : Inserting sp|Q9H1K0|RBNS5_HUMAN

01 Feb 2022 15:22:49,742 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:49,743 INFO : Inserting sp|APEX|APEX

01 Feb 2022 15:22:49,749 INFO : 81% Done

01 Feb 2022 15:22:49,929 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:49,932 INFO : Inserting sp|P42866|OPRM_MOUSE

01 Feb 2022 15:22:49,936 INFO : Inserting sp|Q86YT6|MIB1_HUMAN

01 Feb 2022 15:22:49,942 INFO : 82% Done

01 Feb 2022 15:22:50,077 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:50,080 INFO : Inserting sp|P55072|TERA_HUMAN

01 Feb 2022 15:22:50,086 INFO : 83% Done

01 Feb 2022 15:22:50,219 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:50,222 INFO : Inserting sp|Q92466|DDB2_HUMAN

01 Feb 2022 15:22:50,269 INFO : 84% Done

01 Feb 2022 15:22:50,413 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:50,416 INFO : Inserting sp|P56537|IF6_HUMAN

01 Feb 2022 15:22:50,422 INFO : 85% Done

01 Feb 2022 15:22:50,563 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:50,566 INFO : Inserting sp|Q9Y2H6|FND3A_HUMAN

01 Feb 2022 15:22:50,616 INFO : 86% Done

01 Feb 2022 15:22:50,729 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:50,732 INFO : Inserting sp|Q96C36|P5CR2_HUMAN

01 Feb 2022 15:22:50,829 INFO : 87% Done

01 Feb 2022 15:22:50,922 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:50,926 INFO : Inserting sp|Q9BZG1|RAB34_HUMAN

01 Feb 2022 15:22:51,014 INFO : 88% Done

01 Feb 2022 15:22:51,106 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:51,109 INFO : Inserting sp|O43148|MCES_HUMAN

01 Feb 2022 15:22:51,164 INFO : 89% Done

01 Feb 2022 15:22:51,314 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:51,317 INFO : Inserting sp|Q9BST9|RTKN_HUMAN

01 Feb 2022 15:22:51,370 INFO : 90% Done

01 Feb 2022 15:22:51,501 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:51,504 INFO : Inserting sp|Q9NQ88|TIGAR_HUMAN

01 Feb 2022 15:22:51,556 INFO : 91% Done

01 Feb 2022 15:22:51,692 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:51,692 INFO : Imported 100 peptide groups.

01 Feb 2022 15:22:51,694 INFO : Inserting sp|Q13595|TRA2A_HUMAN

01 Feb 2022 15:22:51,700 INFO : 92% Done

01 Feb 2022 15:22:51,838 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:51,841 INFO : Inserting sp|P09936|UCHL1_HUMAN

01 Feb 2022 15:22:51,896 INFO : 93% Done

01 Feb 2022 15:22:51,988 DEBUG: Total peptides inserted: 3

01 Feb 2022 15:22:51,992 INFO : Inserting sp|Q9Y4P8|WIPI2_HUMAN

01 Feb 2022 15:22:52,049 INFO : 94% Done

01 Feb 2022 15:22:52,189 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:52,198 INFO : Inserting sp|O94992|HEXI1_HUMAN

01 Feb 2022 15:22:52,253 INFO : 95% Done

01 Feb 2022 15:22:52,299 DEBUG: Total peptides inserted: 2

01 Feb 2022 15:22:52,304 INFO : Inserting sp|Q13308|PTK7_HUMAN

01 Feb 2022 15:22:52,407 INFO : 96% Done

01 Feb 2022 15:22:52,499 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:52,502 INFO : Inserting sp|Q6WKZ4|RFIP1_HUMAN

01 Feb 2022 15:22:52,604 INFO : 97% Done

01 Feb 2022 15:22:52,696 DEBUG: Total peptides inserted: 4

01 Feb 2022 15:22:52,696 INFO : Inserting GRK5

01 Feb 2022 15:22:52,700 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:52,700 INFO : Inserting ADRBK1

01 Feb 2022 15:22:52,802 INFO : 98% Done

01 Feb 2022 15:22:52,888 DEBUG: Total peptides inserted: 5

01 Feb 2022 15:22:52,889 INFO : Done parsing Skyline document.

01 Feb 2022 15:22:52,891 INFO : Creating and populating temp tables for Proportion values

01 Feb 2022 15:22:53,073 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

01 Feb 2022 15:22:53,936 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

01 Feb 2022 15:22:54,543 INFO : Cleaning up temp tables

01 Feb 2022 15:22:54,790 INFO : Completed import of Skyline document from MOR_APEX_quant.sky.zip

01 Feb 2022 15:22:54,794 INFO : 100% Done

01 Feb 2022 15:22:54,800 DEBUG: Finished trying to load data file file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant.sky.zip into the system

01 Feb 2022 15:22:54,806 INFO : Done importing xar

01 Feb 2022 15:22:54,808 INFO : Loading pages and webpart properties

01 Feb 2022 15:22:54,875 INFO : Done importing 4 page(s) with 7 webpart(s)

01 Feb 2022 15:22:54,876 INFO : Importing files metadata.

01 Feb 2022 15:22:54,876 DEBUG: [/Panorama Public/2022/UCSF Krogan Lab - MOR-APEX]  Reading files metadata from /data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF Krogan Lab - MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export

01 Feb 2022 15:22:54,877 INFO :

01 Feb 2022 15:22:54,877 INFO : Experiment import completed successfully.

01 Feb 2022 15:22:54,877 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.ExperimentImportTask'

01 Feb 2022 15:22:54,905 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.UpdateFolderTypeTask' at location 'webserver-high-priority'

01 Feb 2022 15:22:54,906 INFO :

01 Feb 2022 15:22:54,906 INFO : Updating the folder type.

01 Feb 2022 15:22:54,908 INFO : Setting the TargetedMS folder type to 'Experimental Data' for folder '/Panorama Public/2022/UCSF Krogan Lab - MOR-APEX'.

01 Feb 2022 15:22:54,910 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.UpdateFolderTypeTask'

01 Feb 2022 15:22:54,940 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask' at location 'webserver-high-priority'

01 Feb 2022 15:22:54,940 INFO :

01 Feb 2022 15:22:54,940 INFO : Finishing up experiment copy.

01 Feb 2022 15:22:54,943 INFO : Creating a new TargetedMS experiment entry in panoramapublic.ExperimentAnnotations.

01 Feb 2022 15:22:54,944 INFO : Setting version on new experiment to 1

01 Feb 2022 15:22:54,944 INFO : Assigning a ProteomeXchange ID.

01 Feb 2022 15:22:55,065 INFO : Assigning a DOI.

01 Feb 2022 15:22:56,152 INFO : Assigned DOI: 10.6069/x8mf-re21

01 Feb 2022 15:22:56,156 INFO : Updating access URL to point to the new copy of the data.

01 Feb 2022 15:22:56,161 INFO : Removing copy permissions given to Panorama Public

01 Feb 2022 15:22:56,174 INFO : Adding read permissions to all users that are folder admins in the source folder.

01 Feb 2022 15:22:56,183 INFO : Updating the 'Raw Data' tab configuration

01 Feb 2022 15:22:56,185 INFO : Updating dataFileUrls for run MOR_APEX_quant.sky.zip; targetedms run ID 130245

01 Feb 2022 15:22:56,185 INFO : Updating dataFileUrl...

01 Feb 2022 15:22:56,185 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant.sky.zip

01 Feb 2022 15:22:56,186 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/UCSF%20Krogan%20Lab%20-%20MOR-APEX/@files/MOR_APEX_quant.sky.zip

01 Feb 2022 15:22:56,188 INFO : Updating dataFileUrl...

01 Feb 2022 15:22:56,188 INFO : from: file:///data/apache-tomcat/instance/panoramaweb/temp/Pipeline_temp/UCSF%20Krogan%20Lab%20-%20MOR-APEX_6056992b-65e3-103a-93e1-fea6ddf5fdda/_temp__2022-02-01_15-21-35/export/xar/experiments_and_runs.xar.exploded/Run125483/MOR_APEX_quant/201804_MOR_APEX_quant.skyd

01 Feb 2022 15:22:56,188 INFO : to: file:///data/labkey/files/Panorama%20Public/2022/UCSF%20Krogan%20Lab%20-%20MOR-APEX/@files/MOR_APEX_quant/201804_MOR_APEX_quant.skyd

01 Feb 2022 15:22:56,191 INFO : Creating a reviewer account.

01 Feb 2022 15:22:56,400 INFO : Created reviewer with email: User panorama+reviewer98@proteinms.net

01 Feb 2022 15:22:56,409 INFO : Hiding the Data Pipeline tab.

01 Feb 2022 15:22:56,413 INFO : Updating Submission. Setting copiedExperimentId to 1383

01 Feb 2022 15:22:56,494 INFO : Emailing submitter.

01 Feb 2022 15:22:56,602 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.CopyExperimentFinalTask'