31 May 2022 15:10:26,635 INFO : Validating data for a ProteomeXchange submission.
31 May 2022 15:10:26,636 INFO : =======================================
31 May 2022 15:10:26,787 INFO : Starting to run task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask' at location 'webserver'
31 May 2022 15:10:26,788 INFO : Validating data for experiment Id: 1367, validation Id: 41
31 May 2022 15:10:26,844 INFO : Validating data for 1 Skyline documents in 1 folders
31 May 2022 15:10:26,889 INFO : Sample file validation for Skyline document: Maven_et_al_skyline_document_2022-01-13_13-30-44.sky.zip
31 May 2022 15:10:26,889 INFO : Found all sample files.
31 May 2022 15:10:26,941 INFO : Modifications validation:
31 May 2022 15:10:26,941 INFO : VALID MODIFICATIONS:
31 May 2022 15:10:26,941 INFO : 141: Carbamidomethyl (C): UNIMOD:4 - Carbamidomethyl
31 May 2022 15:10:26,941 INFO : Maven_et_al_skyline_document_2022-01-13_13-30-44.sky.zip
31 May 2022 15:10:26,941 INFO : 142: Label:13C(6)15N(2) (C-term K):
31 May 2022 15:10:26,941 INFO : Maven_et_al_skyline_document_2022-01-13_13-30-44.sky.zip
31 May 2022 15:10:26,941 INFO : 143: Label:13C(6)15N(4) (C-term R):
31 May 2022 15:10:26,941 INFO : Maven_et_al_skyline_document_2022-01-13_13-30-44.sky.zip
31 May 2022 15:10:26,941 INFO : INVALID MODIFICATIONS (No Unimod ID):
31 May 2022 15:10:27,549 INFO : Spectral library validation:
31 May 2022 15:10:27,549 INFO : 'PPG Spectral Library 1' (PPG Spectral Library 1.blib) library in 1 Skyline documents was built with 7 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 15:10:27,549 INFO : MISSING FILES:
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-04
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-05
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-06
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-07
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-09
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-10
31 May 2022 15:10:27,549 INFO : Spectrum File: QE20150909-11
31 May 2022 15:10:27,549 INFO : Peptide Id File: msms.txt
31 May 2022 15:10:27,549 INFO : Peptide Id File: mqpar.xml
31 May 2022 15:10:27,549 INFO : Peptide Id File: evidence.txt
31 May 2022 15:10:27,549 INFO : 'PPG26' (PPG26.blib) library in 1 Skyline documents was built with 18 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 15:10:27,549 INFO : MISSING FILES:
31 May 2022 15:10:27,549 INFO : Spectrum File: qx007857
31 May 2022 15:10:27,549 INFO : Spectrum File: qx007859
31 May 2022 15:10:27,549 INFO : Spectrum File: qx007861
31 May 2022 15:10:27,549 INFO : Spectrum File: qx007863
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007865
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007867
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007869
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007871
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007873
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007875
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007877
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007879
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007881
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007883
31 May 2022 15:10:27,550 INFO : Spectrum File: qx007885
31 May 2022 15:10:27,550 INFO : Spectrum File: qx008455
31 May 2022 15:10:27,550 INFO : Spectrum File: qx008459
31 May 2022 15:10:27,550 INFO : Spectrum File: qx008463
31 May 2022 15:10:27,550 INFO : Peptide Id File: msms.txt
31 May 2022 15:10:27,550 INFO : Peptide Id File: mqpar.xml
31 May 2022 15:10:27,550 INFO : Peptide Id File: evidence.txt
31 May 2022 15:10:27,550 INFO : 'PPG24_25' (PPG24_25.blib) library in 1 Skyline documents was built with 6 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 15:10:27,551 INFO : MISSING FILES:
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG24_01
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG24_02
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG24_03
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG24_04
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG25_01
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG25_02
31 May 2022 15:10:27,551 INFO : Peptide Id File: msms.txt
31 May 2022 15:10:27,551 INFO : Peptide Id File: mqpar.xml
31 May 2022 15:10:27,551 INFO : Peptide Id File: evidence.txt
31 May 2022 15:10:27,551 INFO : 'PPG Spectral Library 2' (PPG Spectral Library 2.blib) library in 1 Skyline documents was built with 1 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 15:10:27,551 INFO : MISSING FILES:
31 May 2022 15:10:27,551 INFO : Spectrum File: qx014382
31 May 2022 15:10:27,551 INFO : Peptide Id File: msms.txt
31 May 2022 15:10:27,551 INFO : Peptide Id File: mqpar.xml
31 May 2022 15:10:27,551 INFO : Peptide Id File: evidence.txt
31 May 2022 15:10:27,551 INFO : 'PPG34' (PPG34.blib) library in 1 Skyline documents was built with 8 raw files; 3 peptide Id files. Status: Missing spectrum and peptide Id files.
31 May 2022 15:10:27,551 INFO : MISSING FILES:
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_01_qx009793
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_02_qx009794
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_03_qx009795
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_06_qx009796
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_07_qx009798
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_10_qx009799
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_11_qx009800
31 May 2022 15:10:27,551 INFO : Spectrum File: PPG34_14_qx009801
31 May 2022 15:10:27,551 INFO : Peptide Id File: msms.txt
31 May 2022 15:10:27,551 INFO : Peptide Id File: mqpar.xml
31 May 2022 15:10:27,551 INFO : Peptide Id File: evidence.txt
31 May 2022 15:10:27,552 INFO : Data validation is complete. Status is IncompleteMetadata
31 May 2022 15:10:27,552 INFO : Successfully completed task 'org.labkey.panoramapublic.pipeline.PxDataValidationTask'