07 Feb 2022 17:24:00,507 INFO : Starting to run task 'org.labkey.targetedms.pipeline.TargetedMSImportTask' at location 'webserver-high-priority'

07 Feb 2022 17:24:00,514 INFO : Starting to import Skyline document from 20190726Malaria_Protein_PfRAP01_56hrs_pos_2022-02-05_18-08-46.sky.zip

07 Feb 2022 17:24:00,515 INFO : Expanding 20190726Malaria_Protein_PfRAP01_56hrs_pos.skyd

07 Feb 2022 17:24:00,543 INFO : Expanding 20190726Malaria_Protein_PfRAP01_56hrs_pos.sky.view

07 Feb 2022 17:24:00,545 INFO : Expanding 20190726Malaria_Protein_PfRAP01_56hrs_pos.sky

07 Feb 2022 17:24:00,558 WARN : The version of this Skyline document is 21.2. This is newer than the highest supported version 20.22

07 Feb 2022 17:24:00,563 INFO : 1% Done

07 Feb 2022 17:24:00,604 DEBUG: Starting to load chromatogram headers

07 Feb 2022 17:24:00,612 DEBUG: Done loading chromatogram headers

07 Feb 2022 17:24:00,807 INFO : Inserting Urea

07 Feb 2022 17:24:00,812 INFO : 2% Done

07 Feb 2022 17:24:00,823 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,823 INFO : Inserting Trimethylamine N-oxide

07 Feb 2022 17:24:00,825 INFO : 4% Done

07 Feb 2022 17:24:00,832 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,832 INFO : Inserting Alanine

07 Feb 2022 17:24:00,837 INFO : 5% Done

07 Feb 2022 17:24:00,843 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,843 INFO : Inserting gamma-Aminobutyric acid

07 Feb 2022 17:24:00,850 INFO : 6% Done

07 Feb 2022 17:24:00,857 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,857 INFO : Inserting Choline

07 Feb 2022 17:24:00,864 INFO : 7% Done

07 Feb 2022 17:24:00,871 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,872 INFO : Inserting Serine

07 Feb 2022 17:24:00,875 INFO : 8% Done

07 Feb 2022 17:24:00,882 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,885 INFO : 9% Done

07 Feb 2022 17:24:00,886 INFO : Inserting Creatinine

07 Feb 2022 17:24:00,889 INFO : 10% Done

07 Feb 2022 17:24:00,896 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,897 INFO : Inserting Proline

07 Feb 2022 17:24:00,900 INFO : 12% Done

07 Feb 2022 17:24:00,907 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,907 INFO : Inserting Valine

07 Feb 2022 17:24:00,914 INFO : 13% Done

07 Feb 2022 17:24:00,921 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,921 INFO : Inserting Threonine

07 Feb 2022 17:24:00,925 INFO : 14% Done

07 Feb 2022 17:24:00,932 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,932 INFO : Inserting Pipecolic acid

07 Feb 2022 17:24:00,935 INFO : 16% Done

07 Feb 2022 17:24:00,942 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,942 INFO : Inserting Leucine

07 Feb 2022 17:24:00,964 INFO : 17% Done

07 Feb 2022 17:24:00,972 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,972 INFO : Inserting Isoleucine

07 Feb 2022 17:24:00,979 INFO : 18% Done

07 Feb 2022 17:24:00,987 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:00,987 INFO : Inserting 4-Hydroxyproline

07 Feb 2022 17:24:00,999 INFO : 20% Done

07 Feb 2022 17:24:01,007 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,007 INFO : Inserting Creatine

07 Feb 2022 17:24:01,015 INFO : 21% Done

07 Feb 2022 17:24:01,023 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,023 INFO : Inserting 3-Ureidopropionic acid

07 Feb 2022 17:24:01,042 INFO : 23% Done

07 Feb 2022 17:24:01,050 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,050 INFO : Inserting Ornithine

07 Feb 2022 17:24:01,055 INFO : 24% Done

07 Feb 2022 17:24:01,063 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,063 INFO : Inserting Adenine

07 Feb 2022 17:24:01,066 INFO : 25% Done

07 Feb 2022 17:24:01,073 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,073 INFO : Inserting Hypoxanthine

07 Feb 2022 17:24:01,076 INFO : 26% Done

07 Feb 2022 17:24:01,083 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,083 INFO : Inserting Trigonelline

07 Feb 2022 17:24:01,089 INFO : 27% Done

07 Feb 2022 17:24:01,096 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,097 INFO : Inserting 4-Guanidinobutyric acid

07 Feb 2022 17:24:01,112 INFO : 29% Done

07 Feb 2022 17:24:01,121 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,121 INFO : Inserting Glutamine

07 Feb 2022 17:24:01,128 INFO : 30% Done

07 Feb 2022 17:24:01,137 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,137 INFO : Inserting Lysine

07 Feb 2022 17:24:01,143 INFO : 31% Done

07 Feb 2022 17:24:01,150 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,151 INFO : Inserting Glutamic acid

07 Feb 2022 17:24:01,156 INFO : 33% Done

07 Feb 2022 17:24:01,163 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,163 INFO : Inserting Methionine

07 Feb 2022 17:24:01,166 INFO : 34% Done

07 Feb 2022 17:24:01,172 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,172 INFO : Inserting Guanine

07 Feb 2022 17:24:01,175 INFO : 35% Done

07 Feb 2022 17:24:01,182 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,182 INFO : Inserting N-Methylglutamate

07 Feb 2022 17:24:01,203 INFO : 37% Done

07 Feb 2022 17:24:01,210 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,210 INFO : Inserting Carnitine 

07 Feb 2022 17:24:01,213 INFO : 38% Done

07 Feb 2022 17:24:01,220 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,222 INFO : 39% Done

07 Feb 2022 17:24:01,222 INFO : Inserting 5-Hydroxylysine

07 Feb 2022 17:24:01,224 INFO : 40% Done

07 Feb 2022 17:24:01,231 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,231 INFO : Inserting Phenylalanine

07 Feb 2022 17:24:01,236 INFO : 41% Done

07 Feb 2022 17:24:01,244 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,244 INFO : Inserting Methionine sulfoxide

07 Feb 2022 17:24:01,248 INFO : 42% Done

07 Feb 2022 17:24:01,255 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,255 INFO : Inserting 3-Methylhistidine

07 Feb 2022 17:24:01,270 INFO : 44% Done

07 Feb 2022 17:24:01,277 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,277 INFO : Inserting Arginine

07 Feb 2022 17:24:01,281 INFO : 46% Done

07 Feb 2022 17:24:01,287 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,287 INFO : Inserting Citrulline

07 Feb 2022 17:24:01,291 INFO : 47% Done

07 Feb 2022 17:24:01,296 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,296 INFO : Inserting Tyrosine

07 Feb 2022 17:24:01,299 INFO : 48% Done

07 Feb 2022 17:24:01,305 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,306 INFO : Inserting Phosphocholine

07 Feb 2022 17:24:01,308 INFO : 49% Done

07 Feb 2022 17:24:01,315 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,315 INFO : Inserting Trimethyllysine

07 Feb 2022 17:24:01,319 INFO : 50% Done

07 Feb 2022 17:24:01,325 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,327 INFO : 51% Done

07 Feb 2022 17:24:01,327 INFO : Inserting N-Acetylglutamic acid

07 Feb 2022 17:24:01,330 INFO : 52% Done

07 Feb 2022 17:24:01,337 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,337 INFO : Inserting Dimethylarginine

07 Feb 2022 17:24:01,341 INFO : 53% Done

07 Feb 2022 17:24:01,349 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,349 INFO : Inserting Tryptophanamide

07 Feb 2022 17:24:01,352 INFO : 54% Done

07 Feb 2022 17:24:01,359 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,359 INFO : Inserting Acetylcarnitine

07 Feb 2022 17:24:01,362 INFO : 56% Done

07 Feb 2022 17:24:01,369 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,369 INFO : Inserting Tryptophan

07 Feb 2022 17:24:01,371 INFO : 58% Done

07 Feb 2022 17:24:01,378 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,378 INFO : Inserting Cystine

07 Feb 2022 17:24:01,381 INFO : 59% Done

07 Feb 2022 17:24:01,387 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,387 INFO : Inserting Thymidine

07 Feb 2022 17:24:01,390 INFO : 60% Done

07 Feb 2022 17:24:01,396 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,396 INFO : Inserting Cytidine

07 Feb 2022 17:24:01,399 INFO : 62% Done

07 Feb 2022 17:24:01,405 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,405 INFO : Inserting Deoxyadenosine

07 Feb 2022 17:24:01,407 INFO : 63% Done

07 Feb 2022 17:24:01,414 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,414 INFO : Inserting Glycerophosphocholine

07 Feb 2022 17:24:01,416 INFO : 65% Done

07 Feb 2022 17:24:01,423 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,423 INFO : Inserting Thiamine

07 Feb 2022 17:24:01,426 INFO : 66% Done

07 Feb 2022 17:24:01,432 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,432 INFO : Inserting Adenosine

07 Feb 2022 17:24:01,435 INFO : 67% Done

07 Feb 2022 17:24:01,441 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,441 INFO : Inserting Guanosine

07 Feb 2022 17:24:01,444 INFO : 69% Done

07 Feb 2022 17:24:01,451 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,451 INFO : Inserting Ophthalmic acid

07 Feb 2022 17:24:01,453 INFO : 70% Done

07 Feb 2022 17:24:01,460 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,460 INFO : Inserting Argininosuccinic acid

07 Feb 2022 17:24:01,463 INFO : 71% Done

07 Feb 2022 17:24:01,470 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,470 INFO : Inserting GSH

07 Feb 2022 17:24:01,473 INFO : 73% Done

07 Feb 2022 17:24:01,480 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,480 INFO : Inserting dAMP

07 Feb 2022 17:24:01,483 INFO : 74% Done

07 Feb 2022 17:24:01,490 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,490 INFO : Inserting Nicotinamide mononucleotide

07 Feb 2022 17:24:01,493 INFO : 75% Done

07 Feb 2022 17:24:01,500 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,500 INFO : Inserting Thiamine monophosphate

07 Feb 2022 17:24:01,503 INFO : 76% Done

07 Feb 2022 17:24:01,510 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,510 INFO : Inserting AMP

07 Feb 2022 17:24:01,514 INFO : 77% Done

07 Feb 2022 17:24:01,521 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,521 INFO : Inserting S-Adenosylhomocysteine

07 Feb 2022 17:24:01,524 INFO : 79% Done

07 Feb 2022 17:24:01,531 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,531 INFO : Inserting dCDP

07 Feb 2022 17:24:01,534 INFO : 80% Done

07 Feb 2022 17:24:01,541 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,541 INFO : Inserting S-Adenosylmethionine

07 Feb 2022 17:24:01,544 INFO : 82% Done

07 Feb 2022 17:24:01,554 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,554 INFO : Inserting Thiamine pyrophosphate

07 Feb 2022 17:24:01,557 INFO : 83% Done

07 Feb 2022 17:24:01,564 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,564 INFO : Inserting ADP

07 Feb 2022 17:24:01,567 INFO : 84% Done

07 Feb 2022 17:24:01,574 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,574 INFO : Inserting Folic acid

07 Feb 2022 17:24:01,577 INFO : 86% Done

07 Feb 2022 17:24:01,584 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,584 INFO : Inserting GDP

07 Feb 2022 17:24:01,587 INFO : 87% Done

07 Feb 2022 17:24:01,593 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,593 INFO : Inserting CDP-ethanolamine

07 Feb 2022 17:24:01,596 INFO : 88% Done

07 Feb 2022 17:24:01,603 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,603 INFO : Inserting CDP-choline

07 Feb 2022 17:24:01,606 INFO : 90% Done

07 Feb 2022 17:24:01,613 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,613 INFO : Inserting dATP

07 Feb 2022 17:24:01,616 INFO : 91% Done

07 Feb 2022 17:24:01,623 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,625 INFO : 92% Done

07 Feb 2022 17:24:01,625 INFO : Inserting ADP ribose

07 Feb 2022 17:24:01,628 INFO : 93% Done

07 Feb 2022 17:24:01,635 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,635 INFO : Inserting GSSG

07 Feb 2022 17:24:01,638 INFO : 94% Done

07 Feb 2022 17:24:01,645 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,645 INFO : Inserting NAD

07 Feb 2022 17:24:01,648 INFO : 95% Done

07 Feb 2022 17:24:01,655 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,655 INFO : Inserting NADP

07 Feb 2022 17:24:01,659 INFO : 97% Done

07 Feb 2022 17:24:01,666 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,666 INFO : Inserting FAD

07 Feb 2022 17:24:01,669 INFO : 98% Done

07 Feb 2022 17:24:01,675 DEBUG: Total molecules inserted: 1

07 Feb 2022 17:24:01,677 INFO : Done parsing Skyline document.

07 Feb 2022 17:24:01,678 INFO : Creating and populating temp tables for Proportion values

07 Feb 2022 17:24:01,702 INFO : Setting PrecursorModifiedAreaProportion values on precursorchrominfo

07 Feb 2022 17:24:01,730 INFO : Setting ModifiedAreaProportion values on generalmoleculechrominfo

07 Feb 2022 17:24:01,751 INFO : Cleaning up temp tables

07 Feb 2022 17:24:01,951 INFO : Completed import of Skyline document from 20190726Malaria_Protein_PfRAP01_56hrs_pos_2022-02-05_18-08-46.sky.zip

07 Feb 2022 17:24:01,954 INFO : 100% Done

07 Feb 2022 17:24:01,990 INFO : Successfully completed task 'org.labkey.targetedms.pipeline.TargetedMSImportTask'